mRNA_E-fasciculatus_F_contig13775.2784.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13775.2784.1 vs. uniprot
Match: D7G250_ECTSI (AAA_23 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G250_ECTSI) HSP 1 Score: 224 bits (570), Expect = 2.070e-69 Identity = 122/129 (94.57%), Postives = 125/129 (96.90%), Query Frame = 1
Query: 4 IPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYAST--ELKVDLAALQERLRAANDLKEEMDASTETYNTIRKEIEAIDARTAELSESLEKLRAVADEVYFL 384
IPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYAST ELKVDLAALQERLRAANDLKEEMDASTETY+T+R+EIEAIDARTAELSESLEKLRAVADEV L
Sbjct: 140 IPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELKVDLAALQERLRAANDLKEEMDASTETYSTLRQEIEAIDARTAELSESLEKLRAVADEVRML 268
BLAST of mRNA_E-fasciculatus_F_contig13775.2784.1 vs. uniprot
Match: A0A6H5L8V1_9PHAE (AAA_23 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8V1_9PHAE) HSP 1 Score: 179 bits (454), Expect = 1.630e-50 Identity = 101/130 (77.69%), Postives = 104/130 (80.00%), Query Frame = 1
Query: 1 QIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYAST--ELKVDLAALQERLRAANDLKEEMDASTETYNTIRKEIEAIDARTAELSESLEKLRAVADEVYFL 384
QIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKAL+NIKKTKQEYAS ELKVDLAALQERLRAANDLKEEMDASTETY+ +R RAVADEV L
Sbjct: 89 QIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALENIKKTKQEYASAVKELKVDLAALQERLRAANDLKEEMDASTETYSNLRXXXXXXXXXXXXXXXXXXXXRAVADEVRML 218
BLAST of mRNA_E-fasciculatus_F_contig13775.2784.1 vs. uniprot
Match: A0A1E7F3C8_9STRA (AAA_23 domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3C8_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.090e-26 Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 1
Query: 1 QIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEY 183
QIPL LGVSKAILENVVFCHQEDASWPLQEGAV+KKKFDDIF+S RYTKALD K K+EY
Sbjct: 138 QIPLMLGVSKAILENVVFCHQEDASWPLQEGAVLKKKFDDIFDSTRYTKALDVFSKAKKEY 198
BLAST of mRNA_E-fasciculatus_F_contig13775.2784.1 vs. uniprot
Match: A0A662WHK9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHK9_9STRA) HSP 1 Score: 112 bits (280), Expect = 3.320e-26 Identity = 58/126 (46.03%), Postives = 90/126 (71.43%), Query Frame = 1
Query: 4 IPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYA--STELKVDLAALQERLRAANDLKEEMDASTETYNTIRKEIEAIDARTAELSESLEKLRAVADEV 375
IP +GVSKAIL++V+FCHQE+A+WPLQEGAV+KK+FDDIFESARYTKAL+ I+K K+ + + K DLA L ++ A +++++++A+ +T + +E E A+ E+LE++ + E+
Sbjct: 140 IPDMMGVSKAILDSVIFCHQEEANWPLQEGAVLKKRFDDIFESARYTKALEAIRKLKKARNDDTKDYKRDLAVLTVNMKTAENIRDKIEAAEDTLRAVSEEREKAGDAVAQAQETLEEMERLQSEI 265
BLAST of mRNA_E-fasciculatus_F_contig13775.2784.1 vs. uniprot
Match: A0A1V9ZB00_9STRA (DNA repair protein RAD50 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB00_9STRA) HSP 1 Score: 111 bits (278), Expect = 6.180e-26 Identity = 65/133 (48.87%), Postives = 89/133 (66.92%), Query Frame = 1
Query: 4 IPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYAST--ELKVDLAALQERLRAANDLKEEMD-------ASTETYNTIRKEIEAIDARTAELSESLEKLRAVADEV 375
IP LGVSKA+LE+V+FCHQE+++WPLQEGAV+KK+FDDIFESARYTKAL+ IKK K+E + ++K DL L E+++ D++E+++ A Y T+ EI + AR E L +R VA V
Sbjct: 140 IPDLLGVSKAVLESVIFCHQEESNWPLQEGAVLKKRFDDIFESARYTKALEAIKKLKKERLAMAKDMKRDLDVLGEQVKRVRDMEEQLETREAKLLALKADYETMSGEIGQLAARVTETDAELAHVRDVAAHV 272
BLAST of mRNA_E-fasciculatus_F_contig13775.2784.1 vs. uniprot
Match: A0A024UCA2_9STRA (AAA_23 domain-containing protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCA2_9STRA) HSP 1 Score: 111 bits (277), Expect = 8.440e-26 Identity = 63/133 (47.37%), Postives = 89/133 (66.92%), Query Frame = 1
Query: 4 IPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYAST--ELKVDLAALQERLRAANDLKEEMDASTETY-------NTIRKEIEAIDARTAELSESLEKLRAVADEV 375
IP LGVSKA+LE+V+FCHQED++WPLQEGAV+KK+FDDIFESARYTKAL+ IKK K + A+ +LK DL + E+++ A +L+E++D N I I+ ++ E + L + RA+ E+
Sbjct: 140 IPDLLGVSKAVLESVIFCHQEDSNWPLQEGAVLKKRFDDIFESARYTKALEAIKKLKADRANQGKDLKRDLDVINEQVKRARELEEQLDVRQSKLEALKLDENAISDNIDDLERHVVEANNVLAESRALNAEI 272
BLAST of mRNA_E-fasciculatus_F_contig13775.2784.1 vs. uniprot
Match: B7FXY7_PHATC (RAD50 recombination protein n=7 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FXY7_PHATC) HSP 1 Score: 110 bits (275), Expect = 1.570e-25 Identity = 58/127 (45.67%), Postives = 86/127 (67.72%), Query Frame = 1
Query: 1 QIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYAST--ELKVDLAALQERLRAANDLKEEMDASTETYNTIRKEIEAIDARTAELSESLEKLRAVADEV 375
Q+P LGVSK+ILE+VVFCHQEDASWPL EGAV+KK+FDDIF+S RYTKALD +KT++E +T +LK++LA L AA+ ++++ E T+ +E + + AE ++ + + ++
Sbjct: 161 QLPALLGVSKSILEHVVFCHQEDASWPLMEGAVLKKRFDDIFDSTRYTKALDAFRKTEKEMTATVKDLKIELAGLNSSKIAADGFRKDLVGYQEALETLEEEKQQVVEGIAEADRDIQVYQGIEAKI 287
BLAST of mRNA_E-fasciculatus_F_contig13775.2784.1 vs. uniprot
Match: A0A8K1CBI4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBI4_PYTOL) HSP 1 Score: 109 bits (272), Expect = 3.980e-25 Identity = 56/126 (44.44%), Postives = 89/126 (70.63%), Query Frame = 1
Query: 4 IPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYA--STELKVDLAALQERLRAANDLKEEMDASTETYNTIRKEIEAIDARTAELSESLEKLRAVADEV 375
IP LGVSKAILE+V+FCHQED++WPLQEGAV+KK+FDDIFESARYTKAL+ I+K ++ + E K +L L +L+ A +++E+++ + E + ++ + +D +L +++ ++DE+
Sbjct: 140 IPEMLGVSKAILESVIFCHQEDSNWPLQEGAVLKKRFDDIFESARYTKALEAIRKLRKARNDDAKEFKRELDVLNVKLKMAEEIREKIEVAEEKLSRMKDKAAQLDDSVDNAENTLREMKQLSDEI 265
BLAST of mRNA_E-fasciculatus_F_contig13775.2784.1 vs. uniprot
Match: A0A448YUC2_9STRA (AAA_23 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUC2_9STRA) HSP 1 Score: 108 bits (270), Expect = 7.430e-25 Identity = 59/105 (56.19%), Postives = 73/105 (69.52%), Query Frame = 1
Query: 1 QIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYA--STELKVDLAALQERLRAANDLKEEMDASTETYNTIRKEIEA 309
Q+PL LGVSKAILENVVFCHQEDASWPLQEGAV+KKKFDDIF+S RYTKALD K K+EY + + K +A L+ AA + E+ E + ++E+
Sbjct: 140 QVPLMLGVSKAILENVVFCHQEDASWPLQEGAVLKKKFDDIFDSTRYTKALDVFVKAKKEYILKAKDHKAVVAELRSHRHAAQGFRAEIRKHNEQMEELEDQLES 244
BLAST of mRNA_E-fasciculatus_F_contig13775.2784.1 vs. uniprot
Match: UPI001908D956 (uncharacterized protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI001908D956) HSP 1 Score: 107 bits (267), Expect = 1.870e-24 Identity = 62/131 (47.33%), Postives = 86/131 (65.65%), Query Frame = 1
Query: 1 QIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTELKVD---LAALQERLRAANDLKEEMDASTETYNT-------IRKEIEAIDARTAELSESLEKLRAV 363
+IP LGVSKA+LENV+FCHQED+ WPL E +V+KKKFDDIFE+ +YTKALD+I+ ++E + ELKVD L LQ + A+ L+E +D T T T +++EI+ ++A ES K + V
Sbjct: 111 EIPHLLGVSKAVLENVIFCHQEDSYWPLSEASVLKKKFDDIFEATKYTKALDSIRAIRKE-RTAELKVDKERLQTLQVQKSHADKLRERIDGLTSTLQTKQIQQEELKQEIKGVEAENIRFMESATKFKEV 240 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13775.2784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13775.2784.1 >prot_E-fasciculatus_F_contig13775.2784.1 ID=prot_E-fasciculatus_F_contig13775.2784.1|Name=mRNA_E-fasciculatus_F_contig13775.2784.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=132bp QIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKAback to top mRNA from alignment at E-fasciculatus_F_contig13775:604..1446+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13775.2784.1 ID=mRNA_E-fasciculatus_F_contig13775.2784.1|Name=mRNA_E-fasciculatus_F_contig13775.2784.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=843bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13775:604..1446+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13775:604..1446+ >mRNA_E-fasciculatus_F_contig13775.2784.1 ID=mRNA_E-fasciculatus_F_contig13775.2784.1|Name=mRNA_E-fasciculatus_F_contig13775.2784.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=792bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13775:604..1446+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |