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Homology
BLAST of mRNA_E-fasciculatus_F_contig13773.2783.1 vs. uniprot
Match: D7G9B3_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B3_ECTSI) HSP 1 Score: 320 bits (820), Expect = 8.560e-96 Identity = 158/187 (84.49%), Postives = 169/187 (90.37%), Query Frame = 1
Query: 1462 MEGEAFRPPGESASPLEMLGEGAIGSHQIVQATVPLGTRRIPLQILDDLSLVFVDMRAALLVRTATARPIMRELCLKTETFEEAVAFENTGEVVVCVPQFVKPRSALQEAGILDGDLITHINGARVSADRPEDLFWRLKPVKGVQLLDVTFLRATGESSAEGYPWHEALAFWKSGVRRHILDDAEVG 2022
ME EAFRPPGESASPLEMLGEGA+GSH+IVQ VPLGTR+I LQILDDLSL FVDMRA LL+RTATA PI+ E+CLK ETFEEAV + GEVVVCVPQFVKPRSALQEAGILDGDLITHING RVS DRPEDLFW LKP+KGVQLLD+ FLRATGESSAEGYPWHEALAFWKSGVRRHILD+ E+G
Sbjct: 1 MEAEAFRPPGESASPLEMLGEGAMGSHRIVQTAVPLGTRKISLQILDDLSLFFVDMRATLLLRTATAGPIVGEVCLKAETFEEAVVSGDPGEVVVCVPQFVKPRSALQEAGILDGDLITHINGQRVSVDRPEDLFWSLKPIKGVQLLDLAFLRATGESSAEGYPWHEALAFWKSGVRRHILDNGELG 187
BLAST of mRNA_E-fasciculatus_F_contig13773.2783.1 vs. uniprot
Match: A0A6H5KXH0_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXH0_9PHAE) HSP 1 Score: 303 bits (776), Expect = 1.290e-86 Identity = 158/204 (77.45%), Postives = 166/204 (81.37%), Query Frame = 1
Query: 1462 MEGEAFRPPGESASPLEMLGEGAIGSHQIVQATVPLGTRRIPLQILDDLSLVFVDMRAALLVRTATARPIMRELCLKTETFEEAVAFENTGEVVVCVPQ-----------------FVKPRSALQEAGILDGDLITHINGARVSADRPEDLFWRLKPVKGVQLLDVTFLRATGESSAEGYPWHEALAFWKSGVRRHILDDAEVG 2022
ME EAFRPPGESASPLEMLGEGA+GSH+IVQ VPLGTR+ LQILDDLSL FVDMRA LL+RTATA PIM ELCLK ETFEEAV N GEVVVC+PQ FVKPRSALQEAGILDGDLITHING RVS D PED F L+PVKGVQLLD+ FLRATGESSAEGYPWHEALAFWKSGVRRHILDDAE+G
Sbjct: 1 MEAEAFRPPGESASPLEMLGEGAMGSHRIVQTAVPLGTRKTSLQILDDLSLFFVDMRATLLLRTATAGPIMDELCLKAETFEEAVVCGNLGEVVVCIPQLYKIPHSVVVDCSPLPQFVKPRSALQEAGILDGDLITHINGQRVSVDWPEDHFLSLQPVKGVQLLDLAFLRATGESSAEGYPWHEALAFWKSGVRRHILDDAELG 204
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Zn(2)-C6 fungal-type DNA-binding domain |
| Ec32 ortholog | Ec-03_004350.1 |
| Exons | 4 |
| Model size | 2022 |
| Cds size | 2022 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13773.2783.1 >prot_E-fasciculatus_F_contig13773.2783.1 ID=prot_E-fasciculatus_F_contig13773.2783.1|Name=mRNA_E-fasciculatus_F_contig13773.2783.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=674bp
VGGSGRIGQQSPPPSADPGRRRSGIGDGGSAPPSPLPELYRKRSRGDISS DGPATLVARGADRRGDLPAAVDDSQRQNRRFNRGVGARAGGGGGGGVAST DATSHKPTALKNGAGSAGGGRGSLSIEGRQTHENEMEIANEMERELRAES TSCGTAARRSEQSTGDGGGSENRQGSPNPSSVSPAAAVAATSVVSAVSAA GQQQHQQQQCQQQRLQQRPPQQGGGTAYRIGSHGPGGSSRADGGDTDGGG GRVVGVLSGRGAGALVRDGSAVASYPVYWREGCDRTASGDAACAKAYAAY KRDGEHTSIGAISSNNSSGSNRHSGGIGYASGAAGGPPAYLVHTKNANSD AAPSSSSTVRVNSAATRRRGGAPLAPPPGPGPGAPSAYNGDTVGYPHFKR RSPSVAAAAAASAAAARPSETCPPPSTGTRGRKGTGRPSAEGGSVSGYLG SLRAAATALRKPEGVGGRGGSAERVEKGRFVGRGVTRMEGEAFRPPGESA SPLEMLGEGAIGSHQIVQATVPLGTRRIPLQILDDLSLVFVDMRAALLVR TATARPIMRELCLKTETFEEAVAFENTGEVVVCVPQFVKPRSALQEAGIL DGDLITHINGARVSADRPEDLFWRLKPVKGVQLLDVTFLRATGESSAEGY PWHEALAFWKSGVRRHILDDAEVG back to topmRNA from alignment at E-fasciculatus_F_contig13773:151..3538- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig13773.2783.1 ID=mRNA_E-fasciculatus_F_contig13773.2783.1|Name=mRNA_E-fasciculatus_F_contig13773.2783.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3388bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13773:151..3538- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female) GTTGGCGGTTCGGGGCGCATCGGACAACAGTCCCCTCCACCCTCTGCAGA
CCCCGGACGCCGCCGCTCCGGGATTGGAGATGGTGGCAGCGCCCCGCCAA
GCCCACTTCCTGAGCTGTACCGCAAGCGTAGTCGGGGTGATATTAGTAGC
GACGGCCCCGCAACGCTCGTAGCGCGGGGGGCAGATAGGCGAGGTGATCT
TCCCGCCGCCGTCGATGACAGTCAACGCCAAAACCGTCGGTTCAACCGCG
GGGTGGGCGCCAGGGCCGGCGGCGGCGGCGGCGGTGGCGTTGCAAGCACC
GACGCCACTTCACACAAGCCGACGGCCCTGAAAAACGGGGCGGGCAGTGC
CGGGGGTGGGCGGGGCAGCCTATCCATCGAAGGTAGGCAGACCCACGAAA
ATGAGATGGAGATCGCGAATGAGATGGAAAGAGAGCTGAGGGCTGAGAGC
ACGAGCTGCGGGACCGCCGCTCGCCGAAGCGAGCAGAGCACCGGTGATGG
TGGTGGCAGTGAAAATAGGCAGGGGTCCCCGAATCCTTCTTCTGTTTCTC
CGGCGGCGGCGGTCGCTGCTACCTCCGTAGTTTCAGCGGTGAGTGCGGCC
GGGCAACAGCAGCATCAGCAGCAGCAGTGCCAGCAACAGCGGCTGCAACA
ACGCCCTCCGCAACAGGGGGGGGGCACTGCGTACCGCATCGGATCTCATG
GCCCTGGAGGGAGCAGTAGGGCAGACGGGGGTGACACTGATGGCGGCGGT
GGGAGGGTGGTAGGGGTGCTCTCGGGGCGTGGGGCAGGGGCGCTGGTACG
AGACGGCTCTGCTGTAGCGTCGTATCCCGTGTACTGGAGAGAGGGCTGCG
ATAGGACCGCGTCTGGTGACGCTGCTTGTGCGAAAGCATATGCAGCCTAC
AAGAGAGACGGAGAACACACCAGCATCGGAGCCATCAGCAGCAACAACAG
CAGTGGTAGCAACAGACACAGCGGTGGCATCGGCTACGCTTCTGGTGCTG
CTGGAGGCCCACCCGCATACCTAGTCCACACAAAGAACGCCAACAGCGAT
GCTGCTCCCTCTTCATCAAGTACCGTCCGCGTGAACTCGGCGGCTACTCG
TCGCAGAGGAGGGGCTCCGCTGGCGCCACCGCCAGGACCAGGGCCCGGGG
CACCGTCCGCCTACAACGGCGACACGGTCGGGTACCCCCACTTCAAAAGA
CGCTCACCTTCGGTGGCGGCGGCGGCGGCGGCCTCAGCAGCAGCGGCTCG
TCCCTCGGAGACGTGCCCCCCTCCCTCGACGGGCACAAGAGGCAGGAAGG
GAACAGGACGGCCTTCAGCGGAAGGCGGGAGTGTTTCTGGGTATCTCGGA
AGTCTCAGGGCTGCTGCGACCGCCCTACGGAAGCCAGAGGGCGTTGGAGG
AAGAGGGGGATCAGCGGAGAGAGTCGAAAAAGGTCGATTCGTCGGGAGGG
GGGTGACGCGGATGGAGGGGGAGGCGTTTCGCCCCCCGGGAGAATCGGCG
TCGCCTCTTGAAATGCTCGGGGAAGGGGCGATCGGGTCCCACCAGATCGT
ACAGGCGACCGTCCCGCTGGGTACGAGGAGGATTCCGCTGCAGATTCTGG
TGAGACGGTGTCGTAAGTTGCTGTCAACCACATCTGTGATCTCGTCGTCG
TCGTGGATAATTTTGTGGGTTTTGTTGTTGATGTTTTTGTTGTTGTTGAC
GTTGTTGATTTGTGTTGGTGTCGTCGACATTGGTATTGTTGGGGTTATCG
TTGTTGTCTCAGGTTATGATGACGGCCCGTGGTGGCTCGTTCTTCGGCTG
AATAGATGTTTCGCTCGTTTTCTCTGTCGCTGTCCGCACCTGCCGGCACT
CGCTCACTCGTGGGTGCCTTTGCATTCTTTCCTCCGACATGACCACCACA
CACCTATCTCGTACAGCATTGTCGGTTTTCATCTTTCATGCCGCTTCGAT
GTGTGCCGTCCCGTTGCCCACCGGCCTGGGTGGGACCCGCAGGATGACCT
TTCCCTCGTTTTCGTCGACATGCGGGCGGCGCTCCTTGTGCGGACGGCAA
CGGCGAGGCCGATCATGAGGGAGCTGTGCCTCAAGACGGAGACCTTCGAG
GAGGCCGTCGCCTTTGAAAACACCGGGGAGGTGGTTGTTTGCGTCCCGCA
GGTGAGAAAATCCGTCTGGATAAGGTGTTTCTGGAATAACCGCGCACTAA
AATTCGAGGTAGTTCTTTTTGCGGGACAACCACCCTCCCTGTGATCAGTT
TTTTAATAAATAGTCGTCGTTTATCAGAAAGGCTCGCGGTAGAAAGGCTG
AATGGTCCGTTAGTCCGAGCGAATTTGCTCCGGGAGGTCACTGTTTAGAG
GAAATTACCATTTTTCGTCCCCCGGTCGCATGCACTCCTCTGTGGGGTGA
GGGAAGTTATTTCGTGATTGTGCCACTGACTCGAGGGCGCCATGTGAACC
CTTGGGCACGCCATTGAGCTGTCCGTCGGCACACACACTCGGCTGTCGCA
TGAAGCTCTGTTGCAGACAGCTACCATCTATCTCATCCGCTTAGTCACAC
AGCCGACACCGACACAGCAGCAGTAGCAGTGGCAACGACGACAGAAAGCT
GAGATCTTTCCTCGTTCTACGAAGCGATTATAAAATATTTCCCACTCTGT
CATCGTGGATTGTTCCCCCCTTCGTCAGTTTGTCAAGCCGAGATCTGCGC
TGCAGGAGGCGGGAATCCTCGACGGGGACCTCATCACACACATCAACGGG
GCGAGGGTCTCCGCAGACAGGCCTGAAGACCTCTTCTGGAGGCTTAAGGT
GTGCAGGGGGTCACCACAATGTTGGAGAGGACACGCGTTGGGCAAACACT
ATATTTGTCCGAGGATGCAACCGTATTCTCGCCCTACCTAAAACCGGCAA
GAGAGAGTAAATGGTTCATCGGGTTCTCTAAAGGGAGCCAAGAGCATTCG
CGCAGTGCGGTTCTCAGGGGGTGGAGCGAGTTGCTTAACGGCTCGAGCAT
AGTCTGGCGGGATTTTCTTGTTGTCTCTTGTGCCTATGCAGACACGTGAC
CGGTGTGTTCGTAATCTCAGCCCGACCCTTGAACAACGTTGTCTATATTG
CGTACGATCGTGAAATAAGAGCGAGCTGATAGGACGGCACTTCCTCCGTA
TCCACTCCAAGCTATTTCGCCCTTTGCTACTGTTTTACCAACTACCGTAC
ACGGGGCAATGCTCGCTTACGTGCTCAATTGCGCTTGGGTGCAGCCCGTT
AAGGGGGTGCAGCTGCTGGACGTGACCTTCTTGCGGGCCACTGGAGAGAG
CAGCGCTGAGGGTTACCCATGGCACGAGGCCCTTGCCTTTTGGAAGAGCG
GGGTCAGGCGTCACATCCTCGACGATGCCGAGGTTGGT back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig13773:151..3538- >mRNA_E-fasciculatus_F_contig13773.2783.1 ID=mRNA_E-fasciculatus_F_contig13773.2783.1|Name=mRNA_E-fasciculatus_F_contig13773.2783.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4044bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13773:151..3538- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female) GTTGGCGGTTCGGGGCGCATCGGACAACAGTCCCCTCCACCCTCTGCAGA CCCCGGACGCCGCCGCTCCGGGATTGGAGATGGTGGCAGCGCCCCGCCAA GCCCACTTCCTGAGCTGTACCGCAAGCGTAGTCGGGGTGATATTAGTAGC GACGGCCCCGCAACGCTCGTAGCGCGGGGGGCAGATAGGCGAGGTGATCT TCCCGCCGCCGTCGATGACAGTCAACGCCAAAACCGTCGGTTCAACCGCG GGGTGGGCGCCAGGGCCGGCGGCGGCGGCGGCGGTGGCGTTGCAAGCACC GACGCCACTTCACACAAGCCGACGGCCCTGAAAAACGGGGCGGGCAGTGC CGGGGGTGGGCGGGGCAGCCTATCCATCGAAGGTAGGCAGACCCACGAAA ATGAGATGGAGATCGCGAATGAGATGGAAAGAGAGCTGAGGGCTGAGAGC ACGAGCTGCGGGACCGCCGCTCGCCGAAGCGAGCAGAGCACCGGTGATGG TGGTGGCAGTGAAAATAGGCAGGGGTCCCCGAATCCTTCTTCTGTTTCTC CGGCGGCGGCGGTCGCTGCTACCTCCGTAGTTTCAGCGGTGAGTGCGGCC GGGCAACAGCAGCATCAGCAGCAGCAGTGCCAGCAACAGCGGCTGCAACA ACGCCCTCCGCAACAGGGGGGGGGCACTGCGTACCGCATCGGATCTCATG GCCCTGGAGGGAGCAGTAGGGCAGACGGGGGTGACACTGATGGCGGCGGT GGGAGGGTGGTAGGGGTGCTCTCGGGGCGTGGGGCAGGGGCGCTGGTACG AGACGGCTCTGCTGTAGCGTCGTATCCCGTGTACTGGAGAGAGGGCTGCG ATAGGACCGCGTCTGGTGACGCTGCTTGTGCGAAAGCATATGCAGCCTAC AAGAGAGACGGAGAACACACCAGCATCGGAGCCATCAGCAGCAACAACAG CAGTGGTAGCAACAGACACAGCGGTGGCATCGGCTACGCTTCTGGTGCTG CTGGAGGCCCACCCGCATACCTAGTCCACACAAAGAACGCCAACAGCGAT GCTGCTCCCTCTTCATCAAGTACCGTCCGCGTGAACTCGGCGGCTACTCG TCGCAGAGGAGGGGCTCCGCTGGCGCCACCGCCAGGACCAGGGCCCGGGG CACCGTCCGCCTACAACGGCGACACGGTCGGGTACCCCCACTTCAAAAGA CGCTCACCTTCGGTGGCGGCGGCGGCGGCGGCCTCAGCAGCAGCGGCTCG TCCCTCGGAGACGTGCCCCCCTCCCTCGACGGGCACAAGAGGCAGGAAGG GAACAGGACGGCCTTCAGCGGAAGGCGGGAGTGTTTCTGGGTATCTCGGA AGTCTCAGGGCTGCTGCGACCGCCCTACGGAAGCCAGAGGGCGTTGGAGG AAGAGGGGGATCAGCGGAGAGAGTCGAAAAAGGTCGATTCGTCGGGAGGG GGGTGACGCGGATGGAGGGGGAGGCGTTTCGCCCCCCGGGAGAATCGGCG TCGCCTCTTGAAATGCTCGGGGAAGGGGCGATCGGGTCCCACCAGATCGT ACAGGCGACCGTCCCGCTGGGTACGAGGAGGATTCCGCTGCAGATTCTGG TTGGCGGTTCGGGGCGCATCGGACAACAGTCCCCTCCACCCTCTGCAGAC CCCGGACGCCGCCGCTCCGGGATTGGAGATGGTGGCAGCGCCCCGCCAAG CCCACTTCCTGAGCTGTACCGCAAGCGTAGTCGGGGTGATATTAGTAGCG ACGGCCCCGCAACGCTCGTAGCGCGGGGGGCAGATAGGCGAGGTGATCTT CCCGCCGCCGTCGATGACAGTCAACGCCAAAACCGTCGGTTCAACCGCGG GGTGGGCGCCAGGGCCGGCGGCGGCGGCGGCGGTGGCGTTGCAAGCACCG ACGCCACTTCACACAAGCCGACGGCCCTGAAAAACGGGGCGGGCAGTGCC GGGGGTGGGCGGGGCAGCCTATCCATCGAAGGTAGGCAGACCCACGAAAA TGAGATGGAGATCGCGAATGAGATGGAAAGAGAGCTGAGGGCTGAGAGCA CGAGCTGCGGGACCGCCGCTCGCCGAAGCGAGCAGAGCACCGGTGATGGT GGTGGCAGTGAAAATAGGCAGGGGTCCCCGAATCCTTCTTCTGTTTCTCC GGCGGCGGCGGTCGCTGCTACCTCCGTAGTTTCAGCGGTGAGTGCGGCCG GGCAACAGCAGCATCAGCAGCAGCAGTGCCAGCAACAGCGGCTGCAACAA CGCCCTCCGCAACAGGGGGGGGGCACTGCGTACCGCATCGGATCTCATGG CCCTGGAGGGAGCAGTAGGGCAGACGGGGGTGACACTGATGGCGGCGGTG GGAGGGTGGTAGGGGTGCTCTCGGGGCGTGGGGCAGGGGCGCTGGTACGA GACGGCTCTGCTGTAGCGTCGTATCCCGTGTACTGGAGAGAGGGCTGCGA TAGGACCGCGTCTGGTGACGCTGCTTGTGCGAAAGCATATGCAGCCTACA AGAGAGACGGAGAACACACCAGCATCGGAGCCATCAGCAGCAACAACAGC AGTGGTAGCAACAGACACAGCGGTGGCATCGGCTACGCTTCTGGTGCTGC TGGAGGCCCACCCGCATACCTAGTCCACACAAAGAACGCCAACAGCGATG CTGCTCCCTCTTCATCAAGTACCGTCCGCGTGAACTCGGCGGCTACTCGT CGCAGAGGAGGGGCTCCGCTGGCGCCACCGCCAGGACCAGGGCCCGGGGC ACCGTCCGCCTACAACGGCGACACGGTCGGGTACCCCCACTTCAAAAGAC GCTCACCTTCGGTGGCGGCGGCGGCGGCGGCCTCAGCAGCAGCGGCTCGT CCCTCGGAGACGTGCCCCCCTCCCTCGACGGGCACAAGAGGCAGGAAGGG AACAGGACGGCCTTCAGCGGAAGGCGGGAGTGTTTCTGGGTATCTCGGAA GTCTCAGGGCTGCTGCGACCGCCCTACGGAAGCCAGAGGGCGTTGGAGGA AGAGGGGGATCAGCGGAGAGAGTCGAAAAAGGTCGATTCGTCGGGAGGGG GGTGACGCGGATGGAGGGGGAGGCGTTTCGCCCCCCGGGAGAATCGGCGT CGCCTCTTGAAATGCTCGGGGAAGGGGCGATCGGGTCCCACCAGATCGTA CAGGCGACCGTCCCGCTGGGTACGAGGAGGATTCCGCTGCAGATTCTGGA TGACCTTTCCCTCGTTTTCGTCGACATGCGGGCGGCGCTCCTTGTGCGGA CGGCAACGGCGAGGCCGATCATGAGGGAGCTGTGCCTCAAGACGGAGACC TTCGAGGAGGCCGTCGCCTTTGAAAACACCGGGGAGGTGGTTGTTTGCGT CCCGCAGGATGACCTTTCCCTCGTTTTCGTCGACATGCGGGCGGCGCTCC TTGTGCGGACGGCAACGGCGAGGCCGATCATGAGGGAGCTGTGCCTCAAG ACGGAGACCTTCGAGGAGGCCGTCGCCTTTGAAAACACCGGGGAGGTGGT TGTTTGCGTCCCGCAGTTTGTCAAGCCGAGATCTGCGCTGCAGGAGGCGG GAATCCTCGACGGGGACCTCATCACACACATCAACGGGGCGAGGGTCTCC GCAGACAGGCCTGAAGACCTCTTCTGGAGGCTTAAGTTTGTCAAGCCGAG ATCTGCGCTGCAGGAGGCGGGAATCCTCGACGGGGACCTCATCACACACA TCAACGGGGCGAGGGTCTCCGCAGACAGGCCTGAAGACCTCTTCTGGAGG CTTAAGCCCGTTAAGGGGGTGCAGCTGCTGGACGTGACCTTCTTGCGGGC CACTGGAGAGAGCAGCGCTGAGGGTTACCCATGGCACGAGGCCCTTGCCT TTTGGAAGAGCGGGGTCAGGCGTCACATCCTCGACGATGCCGAGGTTGGT CCCGTTAAGGGGGTGCAGCTGCTGGACGTGACCTTCTTGCGGGCCACTGG AGAGAGCAGCGCTGAGGGTTACCCATGGCACGAGGCCCTTGCCTTTTGGA AGAGCGGGGTCAGGCGTCACATCCTCGACGATGCCGAGGTTGGT back to top
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