mRNA_E-fasciculatus_F_contig1377.2782.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1377.2782.1
Unique NamemRNA_E-fasciculatus_F_contig1377.2782.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1377.2782.1 vs. uniprot
Match: A0A6H5KJR1_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJR1_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 1.220e-89
Identity = 144/153 (94.12%), Postives = 146/153 (95.42%), Query Frame = 1 
Query:   25 LGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQFVTDVMKPLSISDIIDNEVQNLSGGELQRVAIALSLGKPADIYLIDEPSAYLDSEQRISCAKLIKRFVLHAKKTAFVVEHDFIMATYLADRVIVYDGEPGIEASFRTVHGLHVG 483
            LGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQFVTDVMKPLSISDIIDNEVQNLSGGELQRVAIALSLGKPADIYLIDEPSAYLDSEQRISCAKLIKRFVLHAKKTAFVVEHDFIMATYLADRVIVYDGEPGIE +  +  GL  G
Sbjct:  494 LGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQFVTDVMKPLSISDIIDNEVQNLSGGELQRVAIALSLGKPADIYLIDEPSAYLDSEQRISCAKLIKRFVLHAKKTAFVVEHDFIMATYLADRVIVYDGEPGIETTAHSPQGLLSG 646
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BLAST of mRNA_E-fasciculatus_F_contig1377.2782.1 vs. uniprot
Match: A0A836C9Z7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Z7_9STRA)

HSP 1 Score: 258 bits (660), Expect = 3.230e-85
Identity = 124/153 (81.05%), Postives = 139/153 (90.85%), Query Frame = 1 
Query:   25 LGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQFVTDVMKPLSISDIIDNEVQNLSGGELQRVAIALSLGKPADIYLIDEPSAYLDSEQRISCAKLIKRFVLHAKKTAFVVEHDFIMATYLADRVIVYDGEPGIEASFRTVHGLHVG 483
            LGVP L+VSYKPQKISP+FEGTVRQLLHKRIRDAY+HPQFVTDV++PL+I DIIDN+VQNLSGGELQRVAI L LGKPA IYLIDEPSAYLDSEQRI+C+KLIKRF++HAKKTAF+VEHDFIMATYLADRV+VYDG+PGIE +      L  G
Sbjct:   26 LGVPTLSVSYKPQKISPKFEGTVRQLLHKRIRDAYVHPQFVTDVLRPLNIEDIIDNDVQNLSGGELQRVAITLCLGKPAAIYLIDEPSAYLDSEQRIACSKLIKRFIMHAKKTAFIVEHDFIMATYLADRVVVYDGQPGIETTAHAPQSLLTG 178
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BLAST of mRNA_E-fasciculatus_F_contig1377.2782.1 vs. uniprot
Match: A0A7S4AN25_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AN25_9STRA)

HSP 1 Score: 253 bits (646), Expect = 9.540e-82
Identity = 124/162 (76.54%), Postives = 141/162 (87.04%), Query Frame = 1 
Query:   13 DGY-----QLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQFVTDVMKPLSISDIIDNEVQNLSGGELQRVAIALSLGKPADIYLIDEPSAYLDSEQRISCAKLIKRFVLHAKKTAFVVEHDFIMATYLADRVIVYDGEPGIEASFRTVHGLHVG 483
            DGY     Q GVP+LNVSYKPQKISP+F+GT RQLLHKRIRDAY+HPQFV+DVMKPLSI  IIDN VQ LSGGELQR+AI L+LGKPAD+YL+DEPSAYLDSEQRI+CAK+IKRF++H+KKTAFVVEHDFIMATYLADRV+VY G PGIEA+  +   L  G
Sbjct:  102 DGYDYEASQAGVPDLNVSYKPQKISPKFKGTTRQLLHKRIRDAYVHPQFVSDVMKPLSIESIIDNGVQALSGGELQRLAITLALGKPADVYLVDEPSAYLDSEQRINCAKVIKRFIMHSKKTAFVVEHDFIMATYLADRVVVYHGNPGIEATATSPQSLLTG 263
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BLAST of mRNA_E-fasciculatus_F_contig1377.2782.1 vs. uniprot
Match: A0A8J9T8K2_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T8K2_PHATR)

HSP 1 Score: 251 bits (640), Expect = 1.190e-81
Identity = 121/152 (79.61%), Postives = 138/152 (90.79%), Query Frame = 1 
Query:   28 GVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQFVTDVMKPLSISDIIDNEVQNLSGGELQRVAIALSLGKPADIYLIDEPSAYLDSEQRISCAKLIKRFVLHAKKTAFVVEHDFIMATYLADRVIVYDGEPGIEASFRTVHGLHVG 483
            GVP+LNVSYKPQKISP+FEGTVRQLLHKRIRDAY+HPQFV+DVMKPL I +IIDN VQ LSGGELQR+AIAL+LG PAD+YLIDEPSAYLDSEQRI+CAK+IKRF++H+KKTAFVVEHDFIM TYLADRV+VY G+PGIEA+  +   L  G
Sbjct:   91 GVPDLNVSYKPQKISPKFEGTVRQLLHKRIRDAYVHPQFVSDVMKPLVIENIIDNGVQTLSGGELQRLAIALALGAPADVYLIDEPSAYLDSEQRINCAKVIKRFIMHSKKTAFVVEHDFIMGTYLADRVVVYHGQPGIEATASSPQSLLTG 242
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BLAST of mRNA_E-fasciculatus_F_contig1377.2782.1 vs. uniprot
Match: A0A7S2F9Z1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F9Z1_9STRA)

HSP 1 Score: 249 bits (636), Expect = 2.610e-81
Identity = 118/154 (76.62%), Postives = 138/154 (89.61%), Query Frame = 1 
Query:   22 QLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQFVTDVMKPLSISDIIDNEVQNLSGGELQRVAIALSLGKPADIYLIDEPSAYLDSEQRISCAKLIKRFVLHAKKTAFVVEHDFIMATYLADRVIVYDGEPGIEASFRTVHGLHVG 483
            ++ VP LN+S KPQKISP+F+GTVRQLLHKRIRDAY+HPQFV+DVM+P+ +  IID+EVQNLSGGELQRVA+AL LGKPAD+YLIDEPSAYLDSEQRI+CAK+IKRF++HAKKTAFVVEHDFIMATYLADRV+VY G PGIEA+  +   L  G
Sbjct:   41 RVAVPQLNISMKPQKISPKFQGTVRQLLHKRIRDAYVHPQFVSDVMRPMKVDPIIDSEVQNLSGGELQRVAMALVLGKPADVYLIDEPSAYLDSEQRITCAKVIKRFIMHAKKTAFVVEHDFIMATYLADRVVVYTGNPGIEATATSAQSLLTG 194
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BLAST of mRNA_E-fasciculatus_F_contig1377.2782.1 vs. uniprot
Match: A0A7S1GHN5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GHN5_CYCTE)

HSP 1 Score: 251 bits (642), Expect = 1.280e-79
Identity = 123/159 (77.36%), Postives = 138/159 (86.79%), Query Frame = 1 
Query:   22 QLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQFVTDVMKPLSISDIIDNEVQNLSGGELQRVAIALSLGKPADIYLIDEPSAYLDSEQRISCAKLIKRFVLHAKKTAFVVEHDFIMATYLADRVIVYDGEPGIEASFRTVHGLHVGATCRL 498
            Q G P+LNVSYKPQKISP+F+GTVRQLLHKR+RDAYIHPQFV+DVMKPL I  IIDN VQ LSGGELQR+AI L LGKPAD+YLIDEPSAYLDSEQRI+CAK+IKRF++H+KKTAFVVEHDFIMATYLADRV+VY G+PGIEA+  T   L  G    L
Sbjct:  232 QAGAPDLNVSYKPQKISPKFKGTVRQLLHKRVRDAYIHPQFVSDVMKPLVIDAIIDNGVQTLSGGELQRLAIVLVLGKPADVYLIDEPSAYLDSEQRINCAKVIKRFIMHSKKTAFVVEHDFIMATYLADRVVVYHGQPGIEATASTPQSLLTGMNAFL 390
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BLAST of mRNA_E-fasciculatus_F_contig1377.2782.1 vs. uniprot
Match: A0A7R9WS68_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WS68_9STRA)

HSP 1 Score: 246 bits (627), Expect = 4.820e-79
Identity = 116/154 (75.32%), Postives = 137/154 (88.96%), Query Frame = 1 
Query:   22 QLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQFVTDVMKPLSISDIIDNEVQNLSGGELQRVAIALSLGKPADIYLIDEPSAYLDSEQRISCAKLIKRFVLHAKKTAFVVEHDFIMATYLADRVIVYDGEPGIEASFRTVHGLHVG 483
            Q G P+L+VSYKPQKISP+F+GTVRQLLHK+IRDAY+HPQF++DVMKPL I +IIDN VQ LSGGELQR+AI ++LGKPAD+YL+DEPSAYLDSEQRI+CAK+IKRF++H+KKTAFVVEHDFIMATYLADRV+VY G PGIEA+      L  G
Sbjct:   96 QAGAPDLHVSYKPQKISPKFKGTVRQLLHKKIRDAYVHPQFISDVMKPLIIENIIDNGVQTLSGGELQRLAITVALGKPADVYLVDEPSAYLDSEQRINCAKVIKRFIMHSKKTAFVVEHDFIMATYLADRVVVYHGRPGIEATASAPQSLLTG 249
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BLAST of mRNA_E-fasciculatus_F_contig1377.2782.1 vs. uniprot
Match: A0A7S2M1D6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M1D6_9STRA)

HSP 1 Score: 246 bits (628), Expect = 8.540e-79
Identity = 116/152 (76.32%), Postives = 138/152 (90.79%), Query Frame = 1 
Query:   28 GVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQFVTDVMKPLSISDIIDNEVQNLSGGELQRVAIALSLGKPADIYLIDEPSAYLDSEQRISCAKLIKRFVLHAKKTAFVVEHDFIMATYLADRVIVYDGEPGIEASFRTVHGLHVG 483
            G P+LNVSYKPQKISP+F+GTVRQLLHKRIR++YIHPQFV+DVMKPL++  ++DN VQNLSGGELQR+AI L+LGKPAD+YL+DEPSAYLDSEQRI+CAK+IKRF++H+KKTAFVVEHDFIMATYLADRV+VY G PGIEA+  +   L  G
Sbjct:  132 GAPDLNVSYKPQKISPKFQGTVRQLLHKRIRESYIHPQFVSDVMKPLNMDALMDNGVQNLSGGELQRLAICLALGKPADVYLVDEPSAYLDSEQRINCAKVIKRFIMHSKKTAFVVEHDFIMATYLADRVVVYTGRPGIEATATSPQSLLTG 283
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BLAST of mRNA_E-fasciculatus_F_contig1377.2782.1 vs. uniprot
Match: A0A1E7F4H9_9STRA (p-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4H9_9STRA)

HSP 1 Score: 251 bits (642), Expect = 1.740e-78
Identity = 125/162 (77.16%), Postives = 140/162 (86.42%), Query Frame = 1 
Query:   13 DGY-----QLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQFVTDVMKPLSISDIIDNEVQNLSGGELQRVAIALSLGKPADIYLIDEPSAYLDSEQRISCAKLIKRFVLHAKKTAFVVEHDFIMATYLADRVIVYDGEPGIEASFRTVHGLHVG 483
            DGY     Q GVP+LNVSYKPQKISP+F+GTVRQLLHKRIRDAY+HPQFV+DVMKPL I  IIDN VQ+LSGGELQR+AI ++LG PAD+YLIDEPSAYLDSEQRI+CAK+IKRF++HAKKTAFVVEHDFIMATYLADRV+VY G PGIEAS      L  G
Sbjct:  324 DGYDYEASQAGVPDLNVSYKPQKISPKFKGTVRQLLHKRIRDAYVHPQFVSDVMKPLIIEGIIDNGVQSLSGGELQRLAITMALGAPADVYLIDEPSAYLDSEQRINCAKVIKRFIMHAKKTAFVVEHDFIMATYLADRVVVYFGNPGIEASAMAPQSLLTG 485
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BLAST of mRNA_E-fasciculatus_F_contig1377.2782.1 vs. uniprot
Match: A0A482RRF2_9ARCH (ATP-binding cassette domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RRF2_9ARCH)

HSP 1 Score: 245 bits (625), Expect = 3.090e-78
Identity = 118/153 (77.12%), Postives = 136/153 (88.89%), Query Frame = 1 
Query:   25 LGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQFVTDVMKPLSISDIIDNEVQNLSGGELQRVAIALSLGKPADIYLIDEPSAYLDSEQRISCAKLIKRFVLHAKKTAFVVEHDFIMATYLADRVIVYDGEPGIEASFRTVHGLHVG 483
            LGVP LNVSYKPQKISP+F+GTVRQLLHK+IRDAYIHPQFV+DVMKP+S+  I+DN VQ+LSGGELQRVAI L LG PADIYL+DEPSAYLDSEQRI+ +K+IKRF++HAKKTAFVVEHDFIMATYLADRV+VYDG PG+E +  +   L  G
Sbjct:  148 LGVPQLNVSYKPQKISPKFQGTVRQLLHKKIRDAYIHPQFVSDVMKPMSMDAIMDNGVQDLSGGELQRVAIVLCLGTPADIYLVDEPSAYLDSEQRIAASKVIKRFIMHAKKTAFVVEHDFIMATYLADRVVVYDGTPGVETTAHSPQALIPG 300
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1377.2782.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJR1_9PHAE1.220e-8994.12ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A836C9Z7_9STRA3.230e-8581.05P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4AN25_9STRA9.540e-8276.54Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A8J9T8K2_PHATR1.190e-8179.61Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A7S2F9Z1_9STRA2.610e-8176.62Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1GHN5_CYCTE1.280e-7977.36Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7R9WS68_9STRA4.820e-7975.32Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2M1D6_9STRA8.540e-7976.32Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1E7F4H9_9STRA1.740e-7877.16p-loop containing nucleoside triphosphate hydrolas... [more]
A0A482RRF2_9ARCH3.090e-7877.12ATP-binding cassette domain-containing protein (Fr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1377contigE-fasciculatus_F_contig1377:12548..14353 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score283.9
Seed ortholog evalue4.9e-74
Seed eggNOG ortholog2880.D8LC25
Preferred nameABCE1
KEGG koko:K06174
GOsGO:0000054,GO:0000166,GO:0000956,GO:0001558,GO:0001959,GO:0002181,GO:0002183,GO:0002682,GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005506,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006412,GO:0006413,GO:0006415,GO:0006417,GO:0006518,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008428,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010941,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0022411,GO:0022613,GO:0023051,GO:0030234,GO:0030554,GO:0030684,GO:0030687,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031347,GO:0031369,GO:0031503,GO:0031974,GO:0032069,GO:0032074,GO:0032268,GO:0032270,GO:0032553,GO:0032555,GO:0032559,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0033036,GO:0033750,GO:0034248,GO:0034250,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0035639,GO:0036094,GO:0040008,GO:0042254,GO:0042273,GO:0042886,GO:0042981,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043523,GO:0043524,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045088,GO:0045184,GO:0045727,GO:0045934,GO:0046483,GO:0046700,GO:0046872,GO:0046907,GO:0046914,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0050657,GO:0050658,GO:0050776,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0051536,GO:0051540,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0060255,GO:0060338,GO:0060548,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0060759,GO:0065007,GO:0065009,GO:0070013,GO:0070481,GO:0070727,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0080090,GO:0080134,GO:0090304,GO:0097159,GO:0097367,GO:0098772,GO:1901214,GO:1901215,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903008,GO:1990904,GO:2000112
EggNOG free text desc.4Fe-4S binding domain
EggNOG OGsCOG1245@1,KOG0063@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Hectar predicted targeting categoryother localisation
Exons3
Model size501
Cds size501
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1377.2782.1prot_E-fasciculatus_F_contig1377.2782.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1377 12548..14353 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927869.8564847-CDS-E-fasciculatus_F_contig1377:12547..127391622927869.8564847-CDS-E-fasciculatus_F_contig1377:12547..12739Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1377 12548..12739 -
1695995731.610455-CDS-E-fasciculatus_F_contig1377:12547..127391695995731.610455-CDS-E-fasciculatus_F_contig1377:12547..12739Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1377 12548..12739 -
1622927869.8906362-CDS-E-fasciculatus_F_contig1377:13546..137141622927869.8906362-CDS-E-fasciculatus_F_contig1377:13546..13714Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1377 13547..13714 -
1695995731.6210222-CDS-E-fasciculatus_F_contig1377:13546..137141695995731.6210222-CDS-E-fasciculatus_F_contig1377:13546..13714Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1377 13547..13714 -
1622927869.9036782-CDS-E-fasciculatus_F_contig1377:14212..143531622927869.9036782-CDS-E-fasciculatus_F_contig1377:14212..14353Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1377 14213..14353 -
1695995731.6293132-CDS-E-fasciculatus_F_contig1377:14212..143531695995731.6293132-CDS-E-fasciculatus_F_contig1377:14212..14353Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1377 14213..14353 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1377.2782.1

>prot_E-fasciculatus_F_contig1377.2782.1 ID=prot_E-fasciculatus_F_contig1377.2782.1|Name=mRNA_E-fasciculatus_F_contig1377.2782.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=167bp
PRCVDGYQLGVPNLNVSYKPQKISPRFEGTVRQLLHKRIRDAYIHPQFVT
DVMKPLSISDIIDNEVQNLSGGELQRVAIALSLGKPADIYLIDEPSAYLD
SEQRISCAKLIKRFVLHAKKTAFVVEHDFIMATYLADRVIVYDGEPGIEA
SFRTVHGLHVGATCRL*
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mRNA from alignment at E-fasciculatus_F_contig1377:12548..14353-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1377.2782.1 ID=mRNA_E-fasciculatus_F_contig1377.2782.1|Name=mRNA_E-fasciculatus_F_contig1377.2782.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1806bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1377:12548..14353- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCGCGATGTGTGGACGGTTATCAGCTGGGCGTGCCGAACCTGAACGTGTC
CTACAAGCCGCAGAAGATCAGCCCGCGCTTCGAGGGCACCGTGAGGCAAC
TGCTGCACAAGCGCATCCGAGACGCCTACATCCACCCGCAGGTAGATAGA
CAGATGCACACGACGGATTCGCTCGCGGCCATAGTGAGGCGTATTTTCTC
TAGGGGACTGGGAGGGCCGAAGGGGCACCGCGTCTATTCCCCCCCCCCCT
CCCCGCCTCAACCGCATTTTTCTTTGCGGGGTATTTCGTTTGAGCCGGGG
ACATCAAAAACAGTTTGCTGTTGTGGTTGTTGGTGTTGGTGTCATTGTTG
GTACGCCTGCGCATGATAAACCTCCATTTGTCTGGATTCTCCAGATAGAA
CCGACGAATTTCCGCTGACATGAGCCACTCGATGTGTTTCTGTGAAATCC
ATAGAGGCATTGCACATGAATCCTGGTCCTGGACGGGGCGGGGGTTCCAT
GTTTCCCGCATAAGAGGCCGCCTTGCTTGTCAAGGTCTGGCCCAGTAGTC
CCACCCCCCTTCCCTTCCTCTTGTAGACTTCACTCACGCAACGCTTCTTA
AACAAACTTCGTCTTGTATTATCCCGTCGTCCTATGCAGTTCGTGACGGA
CGTGATGAAGCCTCTGAGCATCAGCGACATCATCGACAACGAGGTCCAGA
ACCTGTCGGGGGGTGAGCTGCAGCGCGTGGCCATCGCGCTCTCGCTCGGG
AAGCCGGCCGACATCTACCTGATCGACGAGCCCTCCGCCTACCTCGACTC
GGAGCAGGTAAATACTGTAGTTGGCAAGGTATTGCTGTACCTGGCTTTTT
TCGCGTCTTTGTTTTCGCCGTTCTGAAGGTATATCGTAGTATCAACCAGC
AAGTAAAGATCACCCAGCGCCGCAAGGATATATTAGGTACCTTCTTTGTT
TGGGGTGTTTGTATTCATCGCGCTGACGGTATACCGTCGGTGACGCAAGA
TATCACACACCCTGGGCGGATTTTCAACGCTCGGGTACTCCACGGTATCG
TCGAGAAAACTTGGACAAGTTGGAGAGCTTTCCGAAATCGTGCCGTTTCA
TTCATGCATCGTTTTCGTCGCGGAGTACTGGAGCTTTTGAAAATTGGTCC
AGGGATCGTGATATCTTGTGTCATTCCACCCACGGTGTGCAGACACGTGG
CGTTGTCGGGTGTTGGTAGTCTCCCGTATGCAGCGGCCAGCAGCTCGTTG
GAATACGCGGTTGTAGGTAAACGTGGGACTGAGATGTTCGACAACAAGGA
GAGTCAATGGAGCTTTTAGTTTTTATTTTAAGTGCCACACTCAACCCTCT
TCCAACCTGCATGCAGAGCTCAGCCTGCGCCGCTACTTTGAGTTGCTTGT
TTTGCGGGCCGGTACGGTATTACACGCGCCCTGTCTTCTGTTTTGATCCG
CCTTGCACTACTGTCTCCCACTGCTTATGTCTCATTGGCTCTGCCACGGT
CTGCCGATCTATCCGTCCACCTCTCACTCCATTTCTTCGTCCATCTCTCT
TCGCCCTCTGTCTCCCTCTCTCTATCTCTCCCCCCCTCTCCCTCCCTCCA
TTTCTGTGTCCCAGCGCATTTCTTGCGCCAAGCTGATCAAGCGGTTCGTG
CTGCACGCTAAGAAGACGGCCTTCGTCGTAGAGCACGACTTCATTATGGC
CACCTACCTGGCGGATAGAGTTATCGTTTACGACGGAGAGCCCGGTATCG
AGGCAAGTTTCCGTACCGTACATGGTCTACATGTCGGTGCGACATGTAGA
TTGTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1377:12548..14353-

>mRNA_E-fasciculatus_F_contig1377.2782.1 ID=mRNA_E-fasciculatus_F_contig1377.2782.1|Name=mRNA_E-fasciculatus_F_contig1377.2782.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1002bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1377:12548..14353- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCGCGATGTGTGGACGGTTATCAGCTGGGCGTGCCGAACCTGAACGTGTC
CTACAAGCCGCAGAAGATCAGCCCGCGCTTCGAGGGCACCGTGAGGCAAC
TGCTGCACAAGCGCATCCGAGACGCCTACATCCACCCGCAGCCGCGATGT
GTGGACGGTTATCAGCTGGGCGTGCCGAACCTGAACGTGTCCTACAAGCC
GCAGAAGATCAGCCCGCGCTTCGAGGGCACCGTGAGGCAACTGCTGCACA
AGCGCATCCGAGACGCCTACATCCACCCGCAGTTCGTGACGGACGTGATG
AAGCCTCTGAGCATCAGCGACATCATCGACAACGAGGTCCAGAACCTGTC
GGGGGGTGAGCTGCAGCGCGTGGCCATCGCGCTCTCGCTCGGGAAGCCGG
CCGACATCTACCTGATCGACGAGCCCTCCGCCTACCTCGACTCGGAGCAG
TTCGTGACGGACGTGATGAAGCCTCTGAGCATCAGCGACATCATCGACAA
CGAGGTCCAGAACCTGTCGGGGGGTGAGCTGCAGCGCGTGGCCATCGCGC
TCTCGCTCGGGAAGCCGGCCGACATCTACCTGATCGACGAGCCCTCCGCC
TACCTCGACTCGGAGCAGCGCATTTCTTGCGCCAAGCTGATCAAGCGGTT
CGTGCTGCACGCTAAGAAGACGGCCTTCGTCGTAGAGCACGACTTCATTA
TGGCCACCTACCTGGCGGATAGAGTTATCGTTTACGACGGAGAGCCCGGT
ATCGAGGCAAGTTTCCGTACCGTACATGGTCTACATGTCGGTGCGACATG
TAGATTGTGACGCATTTCTTGCGCCAAGCTGATCAAGCGGTTCGTGCTGC
ACGCTAAGAAGACGGCCTTCGTCGTAGAGCACGACTTCATTATGGCCACC
TACCTGGCGGATAGAGTTATCGTTTACGACGGAGAGCCCGGTATCGAGGC
AAGTTTCCGTACCGTACATGGTCTACATGTCGGTGCGACATGTAGATTGT
GA
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