mRNA_E-fasciculatus_F_contig13764.2778.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13764.2778.1 vs. uniprot
Match: A0A6H5KQ85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ85_9PHAE) HSP 1 Score: 605 bits (1561), Expect = 2.680e-190 Identity = 437/610 (71.64%), Postives = 464/610 (76.07%), Query Frame = 1
Query: 1 PCADPANKNQNDEPDETPGAQAKRKDDAKRADDSSDATQGDADAKVAEANDRTGAGPTGAAELEEVLPIRGTKGHSGPNGAPAAVAEGHGGAQKDAQEEVVVPCEGARAKARVGDGASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPADPTVADKDQLPHEATEGAAGGDTLDGVPAAAAVDRQDADRPPKRRVSPRAGSQPPTTTEPSSTGTRKTRRSVRSGTTLKNGPENGAQAYGSPSDHLDGGRGASSVDDGGXXXXXXXXXXXXXXXTAGAGSEKAENAADAPKNGVVATTATTTTSHEKTAAVSPTSSPTAXXXXXXXXSSPCPTSTPERNANKARFGDKPEAQGQAAPAEEDAGMEAPPATSPPGPPTRARLRRAAAXXXXXXXXXXXXXXXXXXAPMVVLLEDGKTWDPFAGEETHRVAVWEPKSQRMIGGVSAPMRRELRAFLAEGKYEIYNGQDGKNTGPVTFSKTGTPSNDPRGRGRGRPPNSAAPAAVLFTSPCRDTTIGETNSSPSARLPNTRAEHXXXXXXXXPPRTPTALSKTAAARGADVDHASEGAGAAAVPPAAEKRGRGGKGISPRLLSGEAGTEGAPAGD 1830
PCA ANKNQN+E DET GA AKRKDDA+ ADD+SDATQGDA+A AEAN+ GA T A +EVLP+ G KG P+ APA VA+G GGAQKDA++E V+ EG A+A GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV A+PTV+DKDQ PH+ATEGAAGGDTLDG PAAAAVDRQD DRPP+RRVSPRAGS PPTTTEPSSTGTR TRR+VRSGTTLKNG ENGAQA GS SD L G GASSVDDGG TA AGSEKAE+AADAPKNGVVAT TT HEKTAA+SPTSS XXXXXXXX PT+TPER+ANKAR GDK EAQGQ AP EE A MEAP AT P GPPTRARLRRAAA APMVVLLE GKTWDP+AGEETHRVAVWEPKS MIGGVSAPMRRELRAFLA+GKYEIYNGQDGKNTGPVTFSK GTPSNDPRGRGRGRPPNSAAP AVL TS CRD T G T SPSARLPN+RA XXX G +V A EGAGAAAVPPAAEKRGRGGK SPRLLS E+GTEGAP GD
Sbjct: 393 PCAGSANKNQNEEADETAGAHAKRKDDAEPADDASDATQGDAEA--AEANNTAGAEQTETAVSKEVLPVTGMKGQRSPDRAPATVAKGDGGAQKDAEQERVIFSEGPGAEA------GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSAEPTVSDKDQPPHKATEGAAGGDTLDGAPAAAAVDRQDTDRPPRRRVSPRAGSVPPTTTEPSSTGTRNTRRTVRSGTTLKNGSENGAQASGSFSD-LGGEWGASSVDDGGDPGAAAVLTAKQ---TARAGSEKAEDAADAPKNGVVATA---TTGHEKTAALSPTSSXXXXXXXXXXXXXXXPTNTPERDANKARLGDKTEAQGQGAPPEEGARMEAPLATLPAGPPTRARLRRAAAGVQPQPNEGSGLGKA---APMVVLLEGGKTWDPYAGEETHRVAVWEPKSGNMIGGVSAPMRRELRAFLAKGKYEIYNGQDGKNTGPVTFSKAGTPSNDPRGRGRGRPPNSAAPVAVLLTSTCRDATTGGTTGSPSARLPNSRARQNHHLQXXXXXXXXXXXXXXX--XGGEVGRAPEGAGAAAVPPAAEKRGRGGKRSSPRLLSDESGTEGAPKGD 982
BLAST of mRNA_E-fasciculatus_F_contig13764.2778.1 vs. uniprot
Match: D7FZ15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ15_ECTSI) HSP 1 Score: 485 bits (1248), Expect = 1.870e-148 Identity = 318/449 (70.82%), Postives = 330/449 (73.50%), Query Frame = 1
Query: 484 VADKDQLPHEATEGAAGGDTLDGVPAAAAVDRQDADRPPKRRVSPRAGSQPPTTTEPSSTGTRKTRRSVRSGTTLKNGPENGAQAYGSPSDHLDGGRGASSVDDGGXXXXXXXXXXXXXXXTAGAGSEKAENAADAPKNGVVATTATTTTSHEKTAAVSPTSSPTAXXXXXXXXSSPCPTSTPERNANKARFGDKPEAQGQAAPAEEDAGMEAPPATSPPGPPTRARLRRAAAXXXXXXXXXXXXXXXXXXAPMVVLLEDGKTWDPFAGEETHRVAVWEPKSQRMIGGVSAPMRRELRAFLAEGKYEIYNGQDGKNTGPVTFSKTGTPSNDPRGRGRGRPPNSAAPAAVLFTSPCRDTTIGETNSSPSARLPNTRAEHXXXXXXXXPPRTPTALSKTAAARGADVDHASEGAGAAAVPPAAEKRGRGGKGISPRLLSGEAGTEGAPAGD 1830
V+DKDQ PHEATEGAAGGDTLDGVPAAAAVDRQDADRPP+RRVSPRAGS P TTTEP STGTR TRRSVR GTTLKNGPENGAQ G S +L G RGASSVDDGG TAGAGSEKAE+AADAPKNGVVAT T SHEKTAA SPTS XXXXXXXX P +TPE NANK R GD EAQGQ AP EE+A MEAPPAT P GPPTR+RLRRAAA APMVVLLE GKTWDP+AGEETHRVAVWEPKS+RMIGGVSAPMRRELRAFLAEGKYEIYNGQDGKNTGPVTFSKTGTPSNDPRGRGRGRPPNSAAP AVL TSPCR+TT GET SPSA LPNTRA XXXXXXXX EKRGRGGK SPRLLS E+GTEG PAG+
Sbjct: 316 VSDKDQPPHEATEGAAGGDTLDGVPAAAAVDRQDADRPPRRRVSPRAGSLPSTTTEPLSTGTRNTRRSVRGGTTLKNGPENGAQPLGGSS-YLGGERGASSVDDGGDPGAATVLTAKQ---TAGAGSEKAEDAADAPKNGVVATAPT---SHEKTAAASPTSXXXXXXXXXXXXXXXSPMNTPELNANKIRLGDNTEAQGQGAPPEENARMEAPPATPPAGPPTRSRLRRAAAGVQPQPNEGSGSGKA---APMVVLLEGGKTWDPYAGEETHRVAVWEPKSRRMIGGVSAPMRRELRAFLAEGKYEIYNGQDGKNTGPVTFSKTGTPSNDPRGRGRGRPPNSAAPVAVLLTSPCRETTTGETTGSPSACLPNTRARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EKRGRGGKRSSPRLLSDESGTEGDPAGE 753 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13764.2778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13764.2778.1 >prot_E-fasciculatus_F_contig13764.2778.1 ID=prot_E-fasciculatus_F_contig13764.2778.1|Name=mRNA_E-fasciculatus_F_contig13764.2778.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=614bp PCADPANKNQNDEPDETPGAQAKRKDDAKRADDSSDATQGDADAKVAEANback to top mRNA from alignment at E-fasciculatus_F_contig13764:63..2169+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13764.2778.1 ID=mRNA_E-fasciculatus_F_contig13764.2778.1|Name=mRNA_E-fasciculatus_F_contig13764.2778.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2107bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13764:63..2169+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13764:63..2169+ >mRNA_E-fasciculatus_F_contig13764.2778.1 ID=mRNA_E-fasciculatus_F_contig13764.2778.1|Name=mRNA_E-fasciculatus_F_contig13764.2778.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3684bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13764:63..2169+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |