mRNA_E-fasciculatus_F_contig13760.2775.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13760.2775.1 vs. uniprot
Match: A0A6H5KBP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP4_9PHAE) HSP 1 Score: 459 bits (1181), Expect = 1.870e-150 Identity = 410/586 (69.97%), Postives = 423/586 (72.18%), Query Frame = 1
Query: 58 MSKILVGRSENAIKNRFNSLNAKGLAETRANELMSKLAPEEKAALLNIDSDPPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSKNSGSKVKGGDVDXAGGRSKAGSGRKGANKXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXNVDERGDGTREGSNASSALGFGTAAXXXXXXXXXXXXXXXX----DAGVGRSAAMEALMVAARGERTACGGTGDEGNDGGSSWSNSN-NRGGAEAGARWKRGWAPAAGAGAERRGRQETXXXXXXXXAAVAEPGRKAAKRPKGGQARRKTDMARAEAGMSVLAQAAGLLDIEDSVEAADGNSXXXXXXXXXXDAGRNGPDAHGMLATGMVDCRSNFGGGGSYASQY------YGRLQTNGHNGSSAFIDHGSTPPGSXXXXXXXXXXXXXXXXXXX---------------------------------------ASPFGGAXXXCGGRTAGTADAFPVGARGVSSVGGARIIGRNSEYYHVGGESSYGGESGGGERASWGGLP----SSSSSQRWSLHSVPGPWRPYWTGQDGGN 1653
MSKILVGRSENAIKNRFNSLNAKGLAE RANELMSKLAPEEKAALLNIDSDP AP XXXXXXXXXXXXXXXXXX SKVKGGDVD GGRSK GSGRK XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXX VD R D TR+GSNASSA GFGTAA XXXXXXXXXXXXXXX DAG GRSAAMEALMVAARGERTACGG+GDEG+DGG W+ SN R GAEAGARWKRGW P G GAERRGRQET AVAEPGRKAAKRPKGGQARRKTD+ARAEAGMSVLAQAAGLLDIEDSVEAADGNS DAG+NG DA+ MLA +VDCRSNFGG G YGR QT+GHNG+ A+IDHGSTP XXXXXXXXXXXXXXXXXXX AS +GG XXXCGGRTA ADAFPVGARG SS A IGRNSEYYHVGG+SSYGGESGGGERASWGGLP SSSS QRWSLHSVPGPWRPY TGQDGGN
Sbjct: 1 MSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSDPLAPPRPCSSSSATKKKAGANSTHVGKEKXXXXXXXXXXXXXXXXXX---------SKVKGGDVDGTGGRSKVGSGRK------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGRDDRTRKGSNASSATGFGTAAGXXXXXXXXXXXXXXXXXXXDAGFGRSAAMEALMVAARGERTACGGSGDEGHDGGDPWNTSNCKRDGAEAGARWKRGWTPVGGEGAERRGRQETAGGSGGG--AVAEPGRKAAKRPKGGQARRKTDIARAEAGMSVLAQAAGLLDIEDSVEAADGNSNNIGGGGGC-DAGQNGLDANVMLAIDLVDCRSNFGGSGXXXXXXXXXXXXYGRHQTSGHNGA-AYIDHGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGXXXAAGRASSYGGTXXXCGGRTAENADAFPVGARGASSASDATSIGRNSEYYHVGGKSSYGGESGGGERASWGGLPWSSSSSSSPQRWSLHSVPGPWRPYLTGQDGGN 567
BLAST of mRNA_E-fasciculatus_F_contig13760.2775.1 vs. uniprot
Match: D7FZ02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ02_ECTSI) HSP 1 Score: 152 bits (384), Expect = 8.210e-36 Identity = 184/507 (36.29%), Postives = 198/507 (39.05%), Query Frame = 1
Query: 1 QEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAETRANELMSKLAPEEKAALLNIDSDPPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSKNSGSKVKGGDVDXAGGRSKAGSGRKGANKXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXNVDERGDGTREGSNASSALGFGTAAXXXXXXXXXXXXXXXXDAGVGRSAAMEALMVAARGERTACGGTGDEGNDGGSSWSNSNNRGGAEAGARWKRGWAP--AAGAGAERRGRQETXXXXXXXXAAVAEPGRKAAKRPKGGQARRKTDMARAEAGMSVLAQAAGLLDIEDSVEAADGNSXXXXXXXXXXDAGRNGPDAHGMLATGMVDCRSNFGGGGS--YASQYYGRLQTNGHNGSSAFIDHGSTPPGSXXXXXXXXXXXXXXXXXXXASPFGGAXXXCGGRTAGTADAFPVGARGVSSVGGARIIGRNSEYYHVGG 1509
+EDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAE RANELMSKLAPEEKAALLNIDSDPPAP +S+A XXXXXXXXXXXXXX ++ R W+R W P A G E + T A GR+ + G RR+ + V AA S R G G+ +V R NFG YA QYYGRLQTNGHNG+ AFIDHGSTPPGS XXXXXXXX CGGRTAGTADAFPVGARG SS G A IGRNSEYYHVGG
Sbjct: 123 EEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSDPPAPPRPC----------------------------------------------------------------------------------------------------------------------------TSSTANXXXXXXXXXXXXXXXXXXXXMPESAAPRQ---------------------------------------------WRRSWLPLGARGPPVEAAAERVTTAATRGTIAIATGAGRRRGRTGSEGGPRRQ----------EXXXXXXXXXXPREEVAAAPSQS-------------RGGKRRRGLRGGRLVGKR-NFGXXXXXRYAGQYYGRLQTNGHNGA-AFIDHGSTPPGSASPLPSGPASGXXXXXXXXXXXXXXTGGGCGGRTAGTADAFPVGARGASSAGDATSIGRNSEYYHVGG 435
BLAST of mRNA_E-fasciculatus_F_contig13760.2775.1 vs. uniprot
Match: A0A7S2FCN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FCN6_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 1.580e-6 Identity = 28/45 (62.22%), Postives = 40/45 (88.89%), Query Frame = 1
Query: 4 EDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAE 138
ED++L +AQRQ+GNKWSE++++L GR+ENA+KNR+NSL K LA+
Sbjct: 4 EDRVLMDAQRQVGNKWSEIARMLPGRAENAVKNRYNSLITKKLAK 48
BLAST of mRNA_E-fasciculatus_F_contig13760.2775.1 vs. uniprot
Match: W7TQR3_9STRA (Myb-related protein a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQR3_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 4.090e-6 Identity = 28/38 (73.68%), Postives = 36/38 (94.74%), Query Frame = 1
Query: 4 EDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSL 117
ED ILC+AQR+LGNKWSE++K+L GR+EN++KNRFNSL
Sbjct: 260 EDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSL 297
BLAST of mRNA_E-fasciculatus_F_contig13760.2775.1 vs. uniprot
Match: K8YTL3_NANGC (V-myb myeloblastosis viral oncogene-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YTL3_NANGC) HSP 1 Score: 61.6 bits (148), Expect = 4.250e-6 Identity = 28/38 (73.68%), Postives = 36/38 (94.74%), Query Frame = 1
Query: 4 EDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSL 117
ED ILC+AQR+LGNKWSE++K+L GR+EN++KNRFNSL
Sbjct: 131 EDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSL 168
BLAST of mRNA_E-fasciculatus_F_contig13760.2775.1 vs. uniprot
Match: A0A7S1U7N5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7N5_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 4.980e-6 Identity = 32/60 (53.33%), Postives = 46/60 (76.67%), Query Frame = 1
Query: 1 QEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAETRANELMSK--LAP 174
+ED IL +AQ +LGNKWSE+S++L GR+ENA+KNRFNS+ K L++ ++ S+ LAP
Sbjct: 34 EEDTILMDAQHRLGNKWSEISRLLPGRAENAVKNRFNSIITKRLSKGESDAYASRAELAP 93
BLAST of mRNA_E-fasciculatus_F_contig13760.2775.1 vs. uniprot
Match: D8LKP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP8_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 5.240e-6 Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 1
Query: 4 EDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLA 135
ED LCEAQ +LGNKWSE+SK+L GR+ENA+KNRFNS+ K LA
Sbjct: 191 EDMKLCEAQGRLGNKWSEISKLLPGRAENAVKNRFNSIITKRLA 234
BLAST of mRNA_E-fasciculatus_F_contig13760.2775.1 vs. uniprot
Match: A0A6H5KU69_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU69_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 8.820e-6 Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 1
Query: 4 EDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLA 135
ED LCEAQ +LGNKWSE+SK+L GR+ENA+KNRFNS+ K LA
Sbjct: 67 EDVKLCEAQGRLGNKWSEISKLLPGRAENAVKNRFNSIITKRLA 110
BLAST of mRNA_E-fasciculatus_F_contig13760.2775.1 vs. uniprot
Match: F0YHL4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHL4_AURAN) HSP 1 Score: 56.6 bits (135), Expect = 9.760e-6 Identity = 27/43 (62.79%), Postives = 37/43 (86.05%), Query Frame = 1
Query: 4 EDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGL 132
ED +L EAQ+++GNKWSE++++L GR+ENA+KNRFNSL K L
Sbjct: 117 EDAVLLEAQQRVGNKWSEIARLLPGRAENAVKNRFNSLITKRL 159
BLAST of mRNA_E-fasciculatus_F_contig13760.2775.1 vs. uniprot
Match: A0A0K9PQS0_ZOSMR (Uncharacterized protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PQS0_ZOSMR) HSP 1 Score: 58.5 bits (140), Expect = 1.860e-5 Identity = 27/47 (57.45%), Postives = 38/47 (80.85%), Query Frame = 1
Query: 1 QEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAET 141
+ED +LCEAQR GNKW+E+SK++ GR++NA+KNRFN+L+ K T
Sbjct: 73 EEDALLCEAQRIYGNKWTEISKVVSGRTDNAVKNRFNTLSKKRTKHT 119 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13760.2775.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13760.2775.1 >prot_E-fasciculatus_F_contig13760.2775.1 ID=prot_E-fasciculatus_F_contig13760.2775.1|Name=mRNA_E-fasciculatus_F_contig13760.2775.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=381bp MWVRRRLAAAAAAAAAAAAAAAAEARIVAARLRAAMSTEPAGEVRLAAAGback to top mRNA from alignment at E-fasciculatus_F_contig13760:112..2933- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13760.2775.1 ID=mRNA_E-fasciculatus_F_contig13760.2775.1|Name=mRNA_E-fasciculatus_F_contig13760.2775.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2822bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13760:112..2933- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13760:112..2933- >mRNA_E-fasciculatus_F_contig13760.2775.1 ID=mRNA_E-fasciculatus_F_contig13760.2775.1|Name=mRNA_E-fasciculatus_F_contig13760.2775.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2286bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13760:112..2933- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |