prot_E-fasciculatus_F_contig13760.2775.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13760.2775.1
Unique Nameprot_E-fasciculatus_F_contig13760.2775.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length381
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13760.2775.1 vs. uniprot
Match: D7FZ02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ02_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 1.910e-21
Identity = 75/107 (70.09%), Postives = 76/107 (71.03%), Query Frame = 0 
Query:  134 MPESAAPRQWRRSWSPLGARGPPVEALATRATTVVARGATAI-TGAGRRRGRAGSEGGPXXXXXXXXXXXXXXXREEVAXXXXXXXXXXXXXXRGLRGGRLVGKRTW 239
            MPESAAPRQWRRSW PLGARGPPVEA A R TT   RG  AI TGAGRRRGR GSEGGP    XXXXXXXXXX REEVA              RGLRGGRLVGKR +
Sbjct:  227 MPESAAPRQWRRSWLPLGARGPPVEAAAERVTTAATRGTIAIATGAGRRRGRTGSEGGPRRQEXXXXXXXXXXPREEVAAAPSQSRGGKRR--RGLRGGRLVGKRNF 331
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13760.2775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZ02_ECTSI1.910e-2170.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..380
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..30
score: 8.041

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13760contigE-fasciculatus_F_contig13760:1063..2641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13760.2775.1mRNA_E-fasciculatus_F_contig13760.2775.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13760 112..2933 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13760.2775.1 ID=prot_E-fasciculatus_F_contig13760.2775.1|Name=mRNA_E-fasciculatus_F_contig13760.2775.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=381bp
MWVRRRLAAAAAAAAAAAAAAAAEARIVAARLRAAMSTEPAGEVRLAAAG
RVRTRRAAATAAATTTTTAVVVVTATVATVERATVAAAAAAATWTRGATA
PARAATPRQRWASGRPLGEARATTMLPPPLAEAMPESAAPRQWRRSWSPL
GARGPPVEALATRATTVVARGATAITGAGRRRGRAGSEGGPRRRERGRRG
GDGRRPREEVAAPPPPSQSRGGKRRRGLRGGRLVGKRTWRGRRRECLSWP
RRPACSTSRTRSKQRMATAIATAAAAAAATLDGMVPMPTACSPLVWSIAE
ATSAVAAATPASTTADSKLTATTAPPPLSTTGPPRPEAPARPPAAPRQGV
GDRQPVEPPPLAEPAAAAAVARPGRLTRSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006311TAT_signal