mRNA_E-fasciculatus_F_contig13752.2770.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13752.2770.1
Unique NamemRNA_E-fasciculatus_F_contig13752.2770.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13752.2770.1 vs. uniprot
Match: A0A6H5L4Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Z9_9PHAE)

HSP 1 Score: 347 bits (889), Expect = 9.120e-99
Identity = 389/711 (54.71%), Postives = 409/711 (57.52%), Query Frame = 1 
Query:  259 NAATMFATPARVGRGGAAXXXXXXXXXXXXXXXXXXXXXXXN----------------------KSTADMXXXXXXXXXS-----GRFTGGKKRHNRIMCSSFEEEGEEEDEAFGDGNDGGAGASPAGKHGLGVDAGCFGRPSNNNNGAGNGNGIRRKGSGMIRNIVDAVTPGRERRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAASAGAAVATXXXXXXXXXXXXXXXXXXXXXXXTASVPIAAAEVVPARDGGAATEQKAGGXXGIGRADAVAAEAAASVKAQKXXXXXXXXXSAETVSEEVAVSADAVTATVRDGSVQEEVAEQEVGDEEEEVVVVAVVTEEPKGEGEAIVKPQPEQEVEEVEEDDR--------------------------------LVVGDEQSSDQSSDRKMLVSEGVVMERAEIAGADLVLVKGEVEGAMDVKNLDIEKGAIVRGDVLADYVTVKGSFDGNIECKDLLIVRRGGTCSGKVSYAQMRVEPGANVEATMRLLGAADAKDKDGNPTILSLPA-VFTVAPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEELISTELPSPARRSWTWAEVRAARAGGAAAGGL 2211
            N A MFATPAR GRGGAAXXXXXXXXXXXXXXXXXXXXXXX                       K+T   XXXXXXXXXS     GRFTGGKKRHNRIMCSSFEEEGEEED+AFGDGNDGGAGA PAGKHGLGVDAGCFGRPSNNN   GNG+GIRRKGSGMIRNIVDAVTPGRE                                                                                                            ASVPI AAEVVPA DG  A E+      G+GRA+AVAA+AAAS+KA+ XXXXXXXXX                                                                                                           +VV      +QSSDRKMLVSEGVVMERA+IAGADLVLVKG++EGAM+VKNLDIEKGAIV+GDVLADYVTVKGSFDGNIECKDLLIVRRGGTCSGKVSYA+MRVEPGANVEATMRLLGAADAKDKDG PT+LSLPA VF VAP+   XXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              ELISTELPSP+RRSWTWAEVRAARAGGAAAGGL
Sbjct: 1149 NGAAMFATPARAGRGGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGDAADYKNTXXXXXXXXXXXXSRAGRSGRFTGGKKRHNRIMCSSFEEEGEEEDQAFGDGNDGGAGAPPAGKHGLGVDAGCFGRPSNNN---GNGSGIRRKGSGMIRNIVDAVTPGRE---------------------------------------------------------------------------------------------------PTPEPTPAIASVPITAAEVVPAVDGATAAEKNERSDDGVGRANAVAAKAAASIKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVV----EGEQSSDRKMLVSEGVVMERADIAGADLVLVKGQLEGAMNVKNLDIEKGAIVKGDVLADYVTVKGSFDGNIECKDLLIVRRGGTCSGKVSYAEMRVEPGANVEATMRLLGAADAKDKDGYPTVLSLPAGVFAVAPTAAAXXXXXXXXXXXXXXPDTTSVVPPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------ELISTELPSPSRRSWTWAEVRAARAGGAAAGGL 1739
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BLAST of mRNA_E-fasciculatus_F_contig13752.2770.1 vs. uniprot
Match: D7FLR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLR9_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 9.040e-68
Identity = 212/310 (68.39%), Postives = 225/310 (72.58%), Query Frame = 1 
Query: 1249 ATVRDGSVQEEVAEQE--VGDEEEEVVVVAVVTEEPKGEGEAIVKPQPEQEVEEVEEDDRLVVGDEQSSDQSSDRKMLVSEGVVMERAEIAGADLVLVKGEVEGAMDVKNLDIEKGAIVRGDVLADYVTVKGSFDGNIECKDLLIVRRGGTCSGKVSYAQMRVEPGANVEATMRLLGAADAKDKDGNPTILSLPA-VFTVAPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEELISTELPSPARRSWTWAE 2169
            AT RD SV     EQE  VG EEE VVVV  V EE KGE +AIVKPQ +    E+EE D +VV      +QSSDRKMLVSEGVVMERA+IAGADLVLVKG++EGAMDVKNLDIEKGAIV+GDVLAD VTV   FDGNIECKDLLIVRRGGTCSGKVSYA+MRVEPGANVEATMRLLGAADAKDKDG PT+LSLPA  F VAP+   XXXXX               XXXXXXX       X                 XXXXXXXXXXXXXXXXXXXXXXXXXX     P ELISTELPSP+RRSWTWAE
Sbjct: 1265 ATTRDESVXXXXXEQETHVGGEEE-VVVVDAVAEELKGENDAIVKPQQQ----EMEEGDGVVV----EGEQSSDRKMLVSEGVVMERADIAGADLVLVKGQLEGAMDVKNLDIEKGAIVKGDVLADCVTVXXXFDGNIECKDLLIVRRGGTCSGKVSYAEMRVEPGANVEATMRLLGAADAKDKDGYPTVLSLPAGAFAVAPTAAAXXXXXTTVVPTATAITAMAPXXXXXXXSAVPPPSXTSASGEEGPETAATSTPXXXXXXXXXXXXXXXXXXXXXXXXXXTA---PAELISTELPSPSRRSWTWAE 1562
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13752.2770.1 vs. uniprot
Match: A0A521YIH3_9PROT (Polymer-forming cytoskeletal protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521YIH3_9PROT)

HSP 1 Score: 69.3 bits (168), Expect = 6.590e-10
Identity = 34/117 (29.06%), Postives = 66/117 (56.41%), Query Frame = 1 
Query: 1435 DEQSSDQSSDRKMLVSEGVVMERAEIAGADLVLVKGEVEGAMDVKNLDIEKGAIVRGDVLADYVTVKGSFDGNIECKDLLIVRRGGTCSGKVSYAQMRVEPGANVEATMRLLGAADA 1785
            D +S D+  + K++V   + ++  EI+  D ++V+G +E  +D + L+I +  + +G +  D   V G F+G +  +  LI+   G  SGK+ YA+++VE GA +   + +L  A +
Sbjct:   50 DTRSGDERKEAKLVVGPQIKIKGVEISDCDTLVVEGRIEATLDSRVLEITEHGVFQGTIAVDNAEVHGRFEGELTVRKQLIIHATGKVSGKIRYAKIKVEEGAELAGEISVLEKAQS 166
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BLAST of mRNA_E-fasciculatus_F_contig13752.2770.1 vs. uniprot
Match: A0A0S8AVV2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8AVV2_9PROT)

HSP 1 Score: 69.3 bits (168), Expect = 8.840e-10
Identity = 31/110 (28.18%), Postives = 60/110 (54.55%), Query Frame = 1 
Query: 1450 DQSSDRKMLVSEGVVMERAEIAGADLVLVKGEVEGAMDVKNLDIEKGAIVRGDVLADYVTVKGSFDGNIECKDLLIVRRGGTCSGKVSYAQMRVEPGANVEATMRLLGAA 1779
            D+  + K++V   + M+  E++  D ++V+G +E  +D + L I    + +G V  D   + G+ +G +  +  L+V   G  SGK+ YA+++VE GA +   + +L  A
Sbjct:   63 DERKEAKLIVGPDIKMKGVEVSDCDTLVVEGRIEATLDARVLQIASNGVFQGTVAVDVAEIHGALEGELTVRKQLVVHATGRVSGKIRYAKIKVEEGAEISGEIGMLDKA 172
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BLAST of mRNA_E-fasciculatus_F_contig13752.2770.1 vs. uniprot
Match: A0A537A1N9_9PROT (Polymer-forming cytoskeletal protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537A1N9_9PROT)

HSP 1 Score: 65.9 bits (159), Expect = 8.960e-9
Identity = 30/111 (27.03%), Postives = 62/111 (55.86%), Query Frame = 1 
Query: 1447 SDQSSDRKMLVSEGVVMERAEIAGADLVLVKGEVEGAMDVKNLDIEKGAIVRGDVLADYVTVKGSFDGNIECKDLLIVRRGGTCSGKVSYAQMRVEPGANVEATMRLLGAA 1779
            +++  + K++V   + ++  EI+  D ++V+G VE  +D + L+I    + +G +  D   + G F+G +  +  L++   G  SGK+ YA+++VE GA +   + +L  A
Sbjct:   52 TNERKEAKLVVGPDIKLKGVEISDCDTLIVEGRVEATLDSRVLEITPHGVFQGTIAVDNAEIHGRFEGELTVRKQLVIYGAGKVSGKIRYAKIKVEEGAELSGEISMLDKA 162
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BLAST of mRNA_E-fasciculatus_F_contig13752.2770.1 vs. uniprot
Match: A0A536Y7L0_9PROT (Polymer-forming cytoskeletal protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536Y7L0_9PROT)

HSP 1 Score: 66.2 bits (160), Expect = 9.950e-9
Identity = 30/101 (29.70%), Postives = 57/101 (56.44%), Query Frame = 1 
Query: 1468 KMLVSEGVVMERAEIAGADLVLVKGEVEGAMDVKNLDIEKGAIVRGDVLADYVTVKGSFDGNIECKDLLIVRRGGTCSGKVSYAQMRVEPGANVEATMRLL 1770
            K++V   + ++  EI+  D ++V+G VE  +D + L+I    + +G +  D   + G F+G +  +  LI+   G  SGK+ YA+++VE GA +   + +L
Sbjct:   79 KLVVGPDIKLKGVEISDCDTLIVEGRVEATLDSRVLEITPNGVFQGTIAVDNAEIHGRFEGELTVRKQLIIYGAGKASGKIRYAKIKVEEGAELSGEISML 179
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BLAST of mRNA_E-fasciculatus_F_contig13752.2770.1 vs. uniprot
Match: A0A1F4F3M2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4F3M2_9PROT)

HSP 1 Score: 65.9 bits (159), Expect = 1.080e-8
Identity = 30/114 (26.32%), Postives = 60/114 (52.63%), Query Frame = 1 
Query: 1438 EQSSDQSSDRKMLVSEGVVMERAEIAGADLVLVKGEVEGAMDVKNLDIEKGAIVRGDVLADYVTVKGSFDGNIECKDLLIVRRGGTCSGKVSYAQMRVEPGANVEATMRLLGAA 1779
            E   ++  + K++V   + M+  E+   D ++V+G +E  +D + L I +  + +G V  D   + G  +G +  +  L++   G  SGK+ YA+++VE GA +   + +L  A
Sbjct:   49 EHKGEERKEAKLIVGPDIKMKGVEVTDCDTLVVEGRMEATLDSRVLQIAQNGVFQGTVAVDQAEIHGKLEGELTVRKQLVIHGTGKVSGKIRYAKIKVEEGAEIAGEIAMLDKA 162
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BLAST of mRNA_E-fasciculatus_F_contig13752.2770.1 vs. uniprot
Match: A0A1F4F539_9PROT (Uncharacterized protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4F539_9PROT)

HSP 1 Score: 65.5 bits (158), Expect = 1.300e-8
Identity = 31/107 (28.97%), Postives = 57/107 (53.27%), Query Frame = 1 
Query: 1450 DQSSDRKMLVSEGVVMERAEIAGADLVLVKGEVEGAMDVKNLDIEKGAIVRGDVLADYVTVKGSFDGNIECKDLLIVRRGGTCSGKVSYAQMRVEPGANVEATMRLL 1770
            ++  + K++V   + M+  E+   D + V+G +E  +D + + I +  +  G V  D   + G  +G +  + LL+V   G  SGKV YA+++VE GA +   + LL
Sbjct:   55 EERKEAKLVVGPDIKMKGVEVTDCDTLAVEGRIEATLDCRVIQIAEHGVFAGTVAVDTAEIHGRLEGELTVRKLLVVHATGKVSGKVRYARIKVEEGAELSGEVNLL 161
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13752.2770.1 vs. uniprot
Match: A0A537BHL4_9PROT (Polymer-forming cytoskeletal protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BHL4_9PROT)

HSP 1 Score: 62.4 bits (150), Expect = 3.560e-8
Identity = 28/97 (28.87%), Postives = 55/97 (56.70%), Query Frame = 1 
Query: 1495 MERAEIAGADLVLVKGEVEGAMDVKNLDIEKGAIVRGDVLADYVTVKGSFDGNIECKDLLIVRRGGTCSGKVSYAQMRVEPGANVEATMRLLGAADA 1785
            M+ AEI+  D ++V+G +E  +D + L+I +  + +G +  D   + G F+G +  +  L +   G  SGK+ YA++++E GA +   + +L  + A
Sbjct:    1 MKGAEISDCDTLVVEGRMEATLDSRVLEIAQNGVFQGTIAVDNAEINGRFEGELTVRKQLTIHGTGKVSGKIRYAKIKIEEGAELAGEISVLDKSQA 97
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BLAST of mRNA_E-fasciculatus_F_contig13752.2770.1 vs. uniprot
Match: A0A521VD19_9PROT (Polymer-forming cytoskeletal protein n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521VD19_9PROT)

HSP 1 Score: 62.8 bits (151), Expect = 1.150e-7
Identity = 29/100 (29.00%), Postives = 55/100 (55.00%), Query Frame = 1 
Query: 1450 DQSSDRKMLVSEGVVMERAEIAGADLVLVKGEVEGAMDVKNLDIEKGAIVRGDVLADYVTVKGSFDGNIECKDLLIVRRGGTCSGKVSYAQMRVEPGANV 1749
            ++  + K++V   + M+  E+   D ++V+G +E  +D + + I +  I  G V  D   + G  +G +  + LL++   G  SGKV YA+++VE GA +
Sbjct:   57 EERKEAKLVVGPDIKMKGVEVTDCDTLVVEGRIEATLDSRVIQIAEHGIFAGTVAVDSAEIHGRLEGELTVRKLLVIHATGKVSGKVRYARIKVEEGAEL 156
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13752.2770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5L4Z9_9PHAE9.120e-9954.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLR9_ECTSI9.040e-6868.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A521YIH3_9PROT6.590e-1029.06Polymer-forming cytoskeletal protein n=2 Tax=uncla... [more]
A0A0S8AVV2_9PROT8.840e-1028.18Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A537A1N9_9PROT8.960e-927.03Polymer-forming cytoskeletal protein n=1 Tax=Betap... [more]
A0A536Y7L0_9PROT9.950e-929.70Polymer-forming cytoskeletal protein n=2 Tax=Betap... [more]
A0A1F4F3M2_9PROT1.080e-826.32Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A1F4F539_9PROT1.300e-828.97Uncharacterized protein n=2 Tax=unclassified Betap... [more]
A0A537BHL4_9PROT3.560e-828.87Polymer-forming cytoskeletal protein n=2 Tax=Betap... [more]
A0A521VD19_9PROT1.150e-729.00Polymer-forming cytoskeletal protein n=3 Tax=uncla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13752contigE-fasciculatus_F_contig13752:21..3383 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score77.0
Seed ortholog evalue4.2e-11
Seed eggNOG ortholog1238182.C882_3269
EggNOG free text desc.Polymer-forming cytoskeletal
EggNOG OGs1N26P@1224,2JTDQ@204441,2UD9Q@28211,COG1664@1,COG1664@2
COG Functional cat.M
Best tax levelRhodospirillales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein of unknown function DUF583
Ec32 orthologEc-03_005270.1
Exons4
Model size2322
Cds size2313
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13752.2770.1prot_E-fasciculatus_F_contig13752.2770.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13752 30..3383 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927868.6186986-UTR-E-fasciculatus_F_contig13752:20..291622927868.6186986-UTR-E-fasciculatus_F_contig13752:20..29Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13752 21..29 +
1695995730.9909623-UTR-E-fasciculatus_F_contig13752:20..291695995730.9909623-UTR-E-fasciculatus_F_contig13752:20..29Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13752 21..29 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927868.631216-CDS-E-fasciculatus_F_contig13752:29..12231622927868.631216-CDS-E-fasciculatus_F_contig13752:29..1223Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13752 30..1223 +
1695995731.000894-CDS-E-fasciculatus_F_contig13752:29..12231695995731.000894-CDS-E-fasciculatus_F_contig13752:29..1223Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13752 30..1223 +
1622927868.64162-CDS-E-fasciculatus_F_contig13752:1352..17381622927868.64162-CDS-E-fasciculatus_F_contig13752:1352..1738Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13752 1353..1738 +
1695995731.0090835-CDS-E-fasciculatus_F_contig13752:1352..17381695995731.0090835-CDS-E-fasciculatus_F_contig13752:1352..1738Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13752 1353..1738 +
1622927868.6529603-CDS-E-fasciculatus_F_contig13752:2225..23181622927868.6529603-CDS-E-fasciculatus_F_contig13752:2225..2318Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13752 2226..2318 +
1695995731.0191138-CDS-E-fasciculatus_F_contig13752:2225..23181695995731.0191138-CDS-E-fasciculatus_F_contig13752:2225..2318Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13752 2226..2318 +
1622927868.67065-CDS-E-fasciculatus_F_contig13752:2743..33831622927868.67065-CDS-E-fasciculatus_F_contig13752:2743..3383Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13752 2744..3383 +
1695995731.0290525-CDS-E-fasciculatus_F_contig13752:2743..33831695995731.0290525-CDS-E-fasciculatus_F_contig13752:2743..3383Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13752 2744..3383 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13752.2770.1

>prot_E-fasciculatus_F_contig13752.2770.1 ID=prot_E-fasciculatus_F_contig13752.2770.1|Name=mRNA_E-fasciculatus_F_contig13752.2770.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=771bp
MNQFFDTILESSLGNDLDEYSATDSAAAVAAAAAGITAPSNSVVVTPRAL
SSIVQAGPPPAQAPEPPSTPRARSSSSDDDDKKNAATMFATPARVGRGGA
ADDKRNVVAVFATPARAGRGDAADNKSTADMFTTPARAGRSGRFTGGKKR
HNRIMCSSFEEEGEEEDEAFGDGNDGGAGASPAGKHGLGVDAGCFGRPSN
NNNGAGNGNGIRRKGSGMIRNIVDAVTPGRERRRARHRHGATATTAAAAT
TAAAAAAATATAGAATPTAGDGAGAVATAGSAAATATAGDVATATATTTT
AGDGAAASAGAAVATAGAAVDDADTAQDTAATTEPSPATASVPIAAAEVV
PARDGGAATEQKAGGGGGIGRADAVAAEAAASVKAQKDAAAAAAAVSAET
VSEEVAVSADAVTATVRDGSVQEEVAEQEVGDEEEEVVVVAVVTEEPKGE
GEAIVKPQPEQEVEEVEEDDRLVVGDEQSSDQSSDRKMLVSEGVVMERAE
IAGADLVLVKGEVEGAMDVKNLDIEKGAIVRGDVLADYVTVKGSFDGNIE
CKDLLIVRRGGTCSGKVSYAQMRVEPGANVEATMRLLGAADAKDKDGNPT
ILSLPAVFTVAPSTTTTTTTTTTTTTTTDAPVAPTALATTAPLVAPATTS
AMPPPSPTAASGEEEQEAEAAATPSASSETPAAVAAAVAPAPPAAAAAAP
EELISTELPSPARRSWTWAEVRAARAGGAAAGGLAGMRAARARRAAAANA
VASAVSKGTALAKEEAAAAPA
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mRNA from alignment at E-fasciculatus_F_contig13752:21..3383+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13752.2770.1 ID=mRNA_E-fasciculatus_F_contig13752.2770.1|Name=mRNA_E-fasciculatus_F_contig13752.2770.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3363bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13752:21..3383+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGAATCGACATGAACCAGTTCTTCGATACCATCCTCGAGTCCTCCTTGGG
TAACGACCTCGACGAGTACTCGGCTACGGACTCCGCGGCAGCCGTAGCCG
CCGCGGCAGCCGGCATCACGGCACCTTCGAACTCCGTGGTCGTCACCCCG
CGCGCCCTCTCCTCCATCGTCCAGGCAGGCCCGCCCCCTGCCCAGGCGCC
GGAGCCCCCGTCAACTCCGCGTGCCCGCTCCTCCTCCTCCGACGACGACG
ACAAGAAGAACGCCGCCACCATGTTTGCAACTCCCGCGAGGGTCGGTAGA
GGCGGTGCAGCCGACGACAAGAGAAACGTCGTTGCCGTGTTTGCAACTCC
GGCGAGGGCCGGTAGGGGCGACGCCGCCGACAACAAGAGCACCGCCGACA
TGTTCACGACTCCAGCGCGGGCCGGTAGGAGCGGACGGTTCACCGGAGGA
AAGAAGCGGCACAACCGAATCATGTGCTCGTCGTTCGAAGAAGAGGGGGA
AGAAGAGGACGAGGCATTTGGGGACGGGAATGACGGCGGCGCGGGTGCGT
CTCCCGCCGGAAAGCACGGCCTCGGGGTTGACGCCGGGTGTTTCGGGAGA
CCGAGCAACAACAACAACGGCGCCGGCAACGGCAACGGGATCCGGCGGAA
GGGGAGCGGGATGATCAGGAACATCGTCGACGCCGTGACGCCCGGCCGCG
AGCGTCGGCGAGCGCGGCACCGCCATGGGGCCACCGCTACCACTGCTGCT
GCTGCTACCACTGCTGCTGCTGCTGCTGCTGCTACCGCTACCGCGGGTGC
TGCTACTCCTACCGCTGGTGATGGTGCTGGTGCTGTTGCTACTGCTGGTT
CTGCTGCTGCTACTGCTACTGCTGGTGATGTTGCTACTGCTACTGCCACC
ACTACTACTGCTGGTGATGGTGCTGCTGCCTCCGCTGGTGCTGCTGTTGC
TACTGCTGGTGCTGCTGTGGATGACGCCGACACCGCCCAAGATACCGCAG
CAACTACCGAGCCATCTCCCGCCACCGCGTCCGTCCCCATCGCTGCTGCT
GAGGTTGTCCCCGCTAGAGATGGGGGCGCCGCGACTGAGCAAAAGGCGGG
TGGTGGCGGTGGGATCGGTCGCGCGGATGCCGTGGCGGCCGAAGCCGCCG
CTTCCGTGAAGGCCCAGAAGGATGCGGCCGCCGCTGCTGCTGCCGTTAGC
GCCGTGATCGCGGCGAAGAAGGCGGAGGACAAGAAGAAGGAGGCCGAGGA
AGCGGCCGCCGCTGCCGCTGCTGCCGCCGCCGCCGCTGCCGCCGCCGCCG
CTGCCGCCGCCGCTACCGCCGCTGCCGGTGAGGAGACGGTCTCGGAAGAG
GTTGCTGTTTCGGCGGATGCAGTTACAGCAACGGTTCGTGACGGGAGTGT
GCAAGAAGAGGTGGCGGAACAGGAGGTAGGAGACGAGGAGGAAGAGGTGG
TTGTAGTCGCTGTCGTGACCGAAGAGCCGAAGGGGGAAGGCGAGGCTATC
GTCAAGCCGCAGCCGGAGCAAGAGGTGGAGGAGGTAGAGGAGGACGATCG
TTTGGTTGTGGGGGACGAGCAGTCGAGCGACCAGTCGAGCGACCGAAAGA
TGCTCGTCAGCGAGGGCGTGGTGATGGAGCGGGCCGAGATCGCTGGCGCT
GACCTTGTCCTGGTGAAGGGCGAGGTGGAGGGGGCCATGGACGTGAAGAA
CTTGGACATCGAGAAAGGGTGAGTGGCTTGACGGCAATAAAGTGATAAAG
TAGGGGGAGGTTTGTTGGTTGATTTGGTGGGATTGGTTTCGCAAGAGGTG
GCGAGAGAAGGAACCCATATTCTCTGTCGCTTCCTTCCTCTTTATTTGTT
CTCCCTCTTCTGGTAAGAGTACGCATAGAAGGAATTCGTTCTGTATGTAG
AAAACTTCCGTGTCAGGTTGATGCGCATGTGTGTGTTGTCCTGGCTGCCG
AGCGCCCGCCCCACCTTTCTGCGTTGCCGGCATACAGTAGTGGAATGCAG
CGTGAGCCCGCTTGTTCGGTGTTTGATCTCGGGCATACGTTTTCCGTGTG
CCAAACTTCATACCTGGTGCTTTATTTCCCTATCGGGGGCACTCCAAACG
GCTAACTCCATGATTCACTGAATCCTTCCTTATACCCGACTTCGGTATCC
CTCCGTACCCCCCCACCGACCCGCCTGTCCCACGCTATCCATGAATCAAT
CGCAGAGCCATCGTGAGGGGCGACGTGCTCGCCGACTACGTGACCGTGAA
GGGCAGCTTCGATGGGAACATCGAGTGCAAGGACCTGTTGATCGTCAGGT
GGGTTTTCTTGACGGGAGTGCGACGAGAACAGAACCCGTCCACCGACGAT
GACCGGCAGGCAGCCTTTGCTAGCCTTTGCTCGCTTGTGTGTGTTGTGGT
TGTTGGTTGGAATGTGGGGTTGTTGTACTGTATTGGTGTTTCATGTTTCG
GGTATGTTCCATGATGCTGTCGTTGAAAATGATGTTGTCGTTGAAAATGA
TGTTGGCGGGACTAGTGTCCTAGAGGAAAACTCTAAATTAGGCGCCACGG
ACCGTTTTTGTATCATGACGCGACTCAACAACGAATTTTGCACAAGAGGC
AATACGTTTCGCGACAGCAATACGTACCCCAACCAAAGCACACCCCGTCT
CACGATGGTACCCGGTACCCACCATCTCCTACCCTCCCTGACGTCTTGTC
TGTCTTTGCTGAAAATATTGCAGGCGCGGCGGTACGTGCTCTGGAAAGGT
GTCCTACGCTCAGATGAGGGTTGAGCCCGGGGCTAACGTGGAGGCCACCA
TGCGACTCCTTGGCGCCGCCGACGCCAAGGACAAGGACGGCAACCCCACC
ATCCTCTCTCTGCCCGCTGTCTTCACGGTCGCACCCTCCACTACCACTAC
CACCACCACTACCACCACCACCACCACCACAACCGACGCCCCCGTTGCCC
CGACGGCATTGGCGACGACGGCACCGCTGGTCGCACCGGCTACTACTTCG
GCTATGCCGCCGCCGTCGCCTACGGCCGCATCCGGAGAGGAGGAACAGGA
GGCGGAGGCGGCGGCGACGCCTTCGGCATCGTCGGAAACGCCTGCAGCTG
TAGCTGCCGCCGTTGCCCCCGCTCCTCCCGCCGCCGCCGCCGCCGCTCCC
GAGGAGTTGATCTCGACGGAACTCCCGAGCCCGGCGAGGCGGTCGTGGAC
CTGGGCGGAGGTGCGCGCCGCCAGGGCCGGGGGCGCCGCCGCTGGGGGGC
TCGCCGGGATGCGGGCCGCGCGGGCCAGGCGGGCGGCGGCGGCGAACGCT
GTTGCCTCTGCTGTGTCGAAGGGGACCGCGCTCGCGAAGGAGGAGGCGGC
GGCGGCGCCTGCG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13752:21..3383+

>mRNA_E-fasciculatus_F_contig13752.2770.1 ID=mRNA_E-fasciculatus_F_contig13752.2770.1|Name=mRNA_E-fasciculatus_F_contig13752.2770.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4626bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13752:21..3383+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAACCAGTTCTTCGATACCATCCTCGAGTCCTCCTTGGGTAACGACCT
CGACGAGTACTCGGCTACGGACTCCGCGGCAGCCGTAGCCGCCGCGGCAG
CCGGCATCACGGCACCTTCGAACTCCGTGGTCGTCACCCCGCGCGCCCTC
TCCTCCATCGTCCAGGCAGGCCCGCCCCCTGCCCAGGCGCCGGAGCCCCC
GTCAACTCCGCGTGCCCGCTCCTCCTCCTCCGACGACGACGACAAGAAGA
ACGCCGCCACCATGTTTGCAACTCCCGCGAGGGTCGGTAGAGGCGGTGCA
GCCGACGACAAGAGAAACGTCGTTGCCGTGTTTGCAACTCCGGCGAGGGC
CGGTAGGGGCGACGCCGCCGACAACAAGAGCACCGCCGACATGTTCACGA
CTCCAGCGCGGGCCGGTAGGAGCGGACGGTTCACCGGAGGAAAGAAGCGG
CACAACCGAATCATGTGCTCGTCGTTCGAAGAAGAGGGGGAAGAAGAGGA
CGAGGCATTTGGGGACGGGAATGACGGCGGCGCGGGTGCGTCTCCCGCCG
GAAAGCACGGCCTCGGGGTTGACGCCGGGTGTTTCGGGAGACCGAGCAAC
AACAACAACGGCGCCGGCAACGGCAACGGGATCCGGCGGAAGGGGAGCGG
GATGATCAGGAACATCGTCGACGCCGTGACGCCCGGCCGCGAGCGTCGGC
GAGCGCGGCACCGCCATGGGGCCACCGCTACCACTGCTGCTGCTGCTACC
ACTGCTGCTGCTGCTGCTGCTGCTACCGCTACCGCGGGTGCTGCTACTCC
TACCGCTGGTGATGGTGCTGGTGCTGTTGCTACTGCTGGTTCTGCTGCTG
CTACTGCTACTGCTGGTGATGTTGCTACTGCTACTGCCACCACTACTACT
GCTGGTGATGGTGCTGCTGCCTCCGCTGGTGCTGCTGTTGCTACTGCTGG
TGCTGCTGTGGATGACGCCGACACCGCCCAAGATACCGCAGCAACTACCG
AGCCATCTCCCGCCACCGCGTCCGTCCCCATCGCTGCTGCTGAGGTTGTC
CCCGCTAGAGATGGGGGCGCCGCGACTGAGCAAAAGGCGGGTGGTGGCGG
TGGGATCGGTCGCGCGGATGCCGTGGCGGCCGAAGCCGCCGCTTCCGTGA
AGGCCCAGAAGGATGCGGCCGCCGCTGCTGCTGCCGTTAGCGCCATGAAC
CAGTTCTTCGATACCATCCTCGAGTCCTCCTTGGGTAACGACCTCGACGA
GTACTCGGCTACGGACTCCGCGGCAGCCGTAGCCGCCGCGGCAGCCGGCA
TCACGGCACCTTCGAACTCCGTGGTCGTCACCCCGCGCGCCCTCTCCTCC
ATCGTCCAGGCAGGCCCGCCCCCTGCCCAGGCGCCGGAGCCCCCGTCAAC
TCCGCGTGCCCGCTCCTCCTCCTCCGACGACGACGACAAGAAGAACGCCG
CCACCATGTTTGCAACTCCCGCGAGGGTCGGTAGAGGCGGTGCAGCCGAC
GACAAGAGAAACGTCGTTGCCGTGTTTGCAACTCCGGCGAGGGCCGGTAG
GGGCGACGCCGCCGACAACAAGAGCACCGCCGACATGTTCACGACTCCAG
CGCGGGCCGGTAGGAGCGGACGGTTCACCGGAGGAAAGAAGCGGCACAAC
CGAATCATGTGCTCGTCGTTCGAAGAAGAGGGGGAAGAAGAGGACGAGGC
ATTTGGGGACGGGAATGACGGCGGCGCGGGTGCGTCTCCCGCCGGAAAGC
ACGGCCTCGGGGTTGACGCCGGGTGTTTCGGGAGACCGAGCAACAACAAC
AACGGCGCCGGCAACGGCAACGGGATCCGGCGGAAGGGGAGCGGGATGAT
CAGGAACATCGTCGACGCCGTGACGCCCGGCCGCGAGCGTCGGCGAGCGC
GGCACCGCCATGGGGCCACCGCTACCACTGCTGCTGCTGCTACCACTGCT
GCTGCTGCTGCTGCTGCTACCGCTACCGCGGGTGCTGCTACTCCTACCGC
TGGTGATGGTGCTGGTGCTGTTGCTACTGCTGGTTCTGCTGCTGCTACTG
CTACTGCTGGTGATGTTGCTACTGCTACTGCCACCACTACTACTGCTGGT
GATGGTGCTGCTGCCTCCGCTGGTGCTGCTGTTGCTACTGCTGGTGCTGC
TGTGGATGACGCCGACACCGCCCAAGATACCGCAGCAACTACCGAGCCAT
CTCCCGCCACCGCGTCCGTCCCCATCGCTGCTGCTGAGGTTGTCCCCGCT
AGAGATGGGGGCGCCGCGACTGAGCAAAAGGCGGGTGGTGGCGGTGGGAT
CGGTCGCGCGGATGCCGTGGCGGCCGAAGCCGCCGCTTCCGTGAAGGCCC
AGAAGGATGCGGCCGCCGCTGCTGCTGCCGTTAGCGCCGAGACGGTCTCG
GAAGAGGTTGCTGTTTCGGCGGATGCAGTTACAGCAACGGTTCGTGACGG
GAGTGTGCAAGAAGAGGTGGCGGAACAGGAGGTAGGAGACGAGGAGGAAG
AGGTGGTTGTAGTCGCTGTCGTGACCGAAGAGCCGAAGGGGGAAGGCGAG
GCTATCGTCAAGCCGCAGCCGGAGCAAGAGGTGGAGGAGGTAGAGGAGGA
CGATCGTTTGGTTGTGGGGGACGAGCAGTCGAGCGACCAGTCGAGCGACC
GAAAGATGCTCGTCAGCGAGGGCGTGGTGATGGAGCGGGCCGAGATCGCT
GGCGCTGACCTTGTCCTGGTGAAGGGCGAGGTGGAGGGGGCCATGGACGT
GAAGAACTTGGACATCGAGAAAGGGAGACGGTCTCGGAAGAGGTTGCTGT
TTCGGCGGATGCAGTTACAGCAACGGTTCGTGACGGGAGTGTGCAAGAAG
AGGTGGCGGAACAGGAGGTAGGAGACGAGGAGGAAGAGGTGGTTGTAGTC
GCTGTCGTGACCGAAGAGCCGAAGGGGGAAGGCGAGGCTATCGTCAAGCC
GCAGCCGGAGCAAGAGGTGGAGGAGGTAGAGGAGGACGATCGTTTGGTTG
TGGGGGACGAGCAGTCGAGCGACCAGTCGAGCGACCGAAAGATGCTCGTC
AGCGAGGGCGTGGTGATGGAGCGGGCCGAGATCGCTGGCGCTGACCTTGT
CCTGGTGAAGGGCGAGGTGGAGGGGGCCATGGACGTGAAGAACTTGGACA
TCGAGAAAGGAGCCATCGTGAGGGGCGACGTGCTCGCCGACTACGTGACC
GTGAAGGGCAGCTTCGATGGGAACATCGAGTGCAAGGACCTGTTGATCGT
CAGAGCCATCGTGAGGGGCGACGTGCTCGCCGACTACGTGACCGTGAAGG
GCAGCTTCGATGGGAACATCGAGTGCAAGGACCTGTTGATCGTCAGGCGC
GGCGGTACGTGCTCTGGAAAGGTGTCCTACGCTCAGATGAGGGTTGAGCC
CGGGGCTAACGTGGAGGCCACCATGCGACTCCTTGGCGCCGCCGACGCCA
AGGACAAGGACGGCAACCCCACCATCCTCTCTCTGCCCGCTGTCTTCACG
GTCGCACCCTCCACTACCACTACCACCACCACTACCACCACCACCACCAC
CACAACCGACGCCCCCGTTGCCCCGACGGCATTGGCGACGACGGCACCGC
TGGTCGCACCGGCTACTACTTCGGCTATGCCGCCGCCGTCGCCTACGGCC
GCATCCGGAGAGGAGGAACAGGAGGCGGAGGCGGCGGCGACGCCTTCGGC
ATCGTCGGAAACGCCTGCAGCTGTAGCTGCCGCCGTTGCCCCCGCTCCTC
CCGCCGCCGCCGCCGCCGCTCCCGAGGAGTTGATCTCGACGGAACTCCCG
AGCCCGGCGAGGCGGTCGTGGACCTGGGCGGAGGTGCGCGCCGCCAGGGC
CGGGGGCGCCGCCGCTGGGGGGCTCGCCGGGATGCGGGCCGCGCGGGCCA
GGCGGGCGGCGGCGGCGAACGCTGTTGCCTCTGCTGTGTCGAAGGGGACC
GCGCTCGCGAAGGAGGAGGCGGCGGCGGCGCCTGCGGCGCGGCGGTACGT
GCTCTGGAAAGGTGTCCTACGCTCAGATGAGGGTTGAGCCCGGGGCTAAC
GTGGAGGCCACCATGCGACTCCTTGGCGCCGCCGACGCCAAGGACAAGGA
CGGCAACCCCACCATCCTCTCTCTGCCCGCTGTCTTCACGGTCGCACCCT
CCACTACCACTACCACCACCACTACCACCACCACCACCACCACAACCGAC
GCCCCCGTTGCCCCGACGGCATTGGCGACGACGGCACCGCTGGTCGCACC
GGCTACTACTTCGGCTATGCCGCCGCCGTCGCCTACGGCCGCATCCGGAG
AGGAGGAACAGGAGGCGGAGGCGGCGGCGACGCCTTCGGCATCGTCGGAA
ACGCCTGCAGCTGTAGCTGCCGCCGTTGCCCCCGCTCCTCCCGCCGCCGC
CGCCGCCGCTCCCGAGGAGTTGATCTCGACGGAACTCCCGAGCCCGGCGA
GGCGGTCGTGGACCTGGGCGGAGGTGCGCGCCGCCAGGGCCGGGGGCGCC
GCCGCTGGGGGGCTCGCCGGGATGCGGGCCGCGCGGGCCAGGCGGGCGGC
GGCGGCGAACGCTGTTGCCTCTGCTGTGTCGAAGGGGACCGCGCTCGCGA
AGGAGGAGGCGGCGGCGGCGCCTGCG
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