prot_E-fasciculatus_F_contig13741.2765.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13741.2765.1
Unique Nameprot_E-fasciculatus_F_contig13741.2765.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length228
Homology
BLAST of mRNA_E-fasciculatus_F_contig13741.2765.1 vs. uniprot
Match: D8LJQ9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ9_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 6.390e-65
Identity = 164/226 (72.57%), Postives = 175/226 (77.43%), Query Frame = 0
Query:    1 RKVDDLFNISKELMIVTMLFLVLSVGLECGLYFDVSSWTGSNLNFFITAAAFWVSVVGPLRRLAVDPLAGIKQSRTDRASLARRESRSTMRTASSCVSDSEDVSSSAKATADIRGSSRAVRVASRKLEEGFYGAGVDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSLYDEPPPANLSPXXXXXXXXXXXXXXXGIHFCTSXXXXXXXXXXXXXXXXXGGEEMV 226
            RKVDDLFNIS+EL+IVT+LFL+L++G++CGLYF+V  WTG NLNFFITAA F VSVVGPLRRLAVDPLAG KQ  T RA LARRE+RS            EDVS SAKATADIRGSSRAVRVASRKLEEGFYG GVDEDXXXXXXXXXXXXXXXXXXXXXXXXX   TSLYDEPPPANLSP               GI+FCTS         XXXXXXXXGGEEMV
Sbjct:  130 RKVDDLFNISRELIIVTILFLILAIGIKCGLYFEVDMWTGGNLNFFITAAVFGVSVVGPLRRLAVDPLAGSKQRCTGRAVLARRETRS------------EDVSYSAKATADIRGSSRAVRVASRKLEEGFYGGGVDEDXXXXXXXXXXXXXXXXXXXXXXXXX---TSLYDEPPPANLSPSPSPGDPGAGNWQYQGINFCTSRGGGADGGRXXXXXXXXGGEEMV 340          
BLAST of mRNA_E-fasciculatus_F_contig13741.2765.1 vs. uniprot
Match: A0A6H5L7K1_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7K1_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 6.970e-57
Identity = 134/202 (66.34%), Postives = 148/202 (73.27%), Query Frame = 0
Query:    2 KVDDLFNISKELMIVTMLFLVLSVGLECGLYFDVSSWTGSNLNFFITAAAFWVSVVGPLRRLAVDPLAGIKQSRTDRASLARRESRSTMRTASSCVSDSEDVSSSAKATADIRGSSRAVRVASRKLEEGFYGAGVDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSLYDEPPPANLSPXXXXXXXXXXXXXXXGIHFCTS 203
            KVDDLFNIS+EL+IVT+LFL+L++G++CGLY++V  WTG NLNFFITAA F VSVVGPLR LAVDPLAG KQ   DRA LARR++RS            EDVS SAKATADIRGSSRAVRVASRKLEEG YG GVDE+         XXXXXXXXXXXXXXX    TSLYDEPPPANLSP               GI+FCTS
Sbjct:  102 KVDDLFNISRELIIVTILFLILAIGIKCGLYYEVDMWTGGNLNFFITAAVFGVSVVGPLRLLAVDPLAGSKQRCMDRAVLARRDTRS------------EDVSYSAKATADIRGSSRAVRVASRKLEEGLYGDGVDENDDDGCDTTPXXXXXXXXXXXXXXXA---TSLYDEPPPANLSPSPSPGDPGAGNWQYQGINFCTS 288          
BLAST of mRNA_E-fasciculatus_F_contig13741.2765.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 2.800e-14
Identity = 58/143 (40.56%), Postives = 81/143 (56.64%), Query Frame = 0
Query:    1 RKVDDLFNISKELMIVTMLFLVLSV----GLECGLYFDVSSWTGSNLNFFITAAAFWVSVVGPLRRLAVDPLAGIKQSRTDRASLARRESRSTMRTASSCVSDSEDVSSSAKATADIRGSSRAVRVASRKLEEGFYGAGVDED 139
            R VDDLFNISKEL++VT+  + L+V      E G  ++   W G+N++ FI A  F +S+V PLRRLA+DPLA  K++  DR  L+R    ST+RTAS   S      S  +A ++             +LEEG  G  +D+D
Sbjct:  137 RNVDDLFNISKELLLVTVAIVCLAVVQKAAAEWGGVYE-QRWVGNNISIFIAAVLFGISIVDPLRRLAMDPLAATKRNYADRVLLSRTAPDSTVRTASGVSSGRSRDPSRIRANSEEEA----------RLEEGDLGGVLDKD 268          
BLAST of mRNA_E-fasciculatus_F_contig13741.2765.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 8.910e-10
Identity = 43/93 (46.24%), Postives = 58/93 (62.37%), Query Frame = 0
Query:    1 RKVDDLFNISKELMIVTMLFLVLSVGLEC----GLYFDVSSWTGSNLNFFITAAAFWVSVVGPLRRLAVDPLAGIKQSRTDRASLARRESRST 89
            R VDDLFNIS EL+ VT+  +V+++  E     G  F+   W  SN++    A  F +S+V PLRRLA+DPLA  K++  DR  L+R ES ST
Sbjct:  231 RNVDDLFNISTELITVTVTIVVVTIVQEVVDKWGGNFE-QRWLTSNISVVFVAVLFCISIVAPLRRLALDPLAATKRNYADRVLLSRTESHST 322          
BLAST of mRNA_E-fasciculatus_F_contig13741.2765.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 1.470e-6
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 0
Query:    1 RKVDDLFNISKELMIVTMLFLVLSVGLEC-----GLYFDVSSWTGSNLNFFITAAAFWVSVVGPLRRLAVDPLAGIKQSRTDRASLARRESRSTMR 91
            R VDDLF+ISKE++IVT   ++L++         G+Y     W   +++    A  F VS+V PLRRLA DPLA  + +  +R  L+R E  +++R
Sbjct:  108 RNVDDLFSISKEIIIVTAAVVILAIEQNVVDKWGGVY--ERRWIDKSVSILFVAVLFGVSIVDPLRRLAFDPLAATQHNHANRILLSRTEPHNSVR 201          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13741.2765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LJQ9_ECTSI6.390e-6572.57Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L7K1_9PHAE6.970e-5766.34RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2T7_ECTSI2.800e-1440.56RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G2T8_ECTSI8.910e-1046.24RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTW1_ECTSI1.470e-638.54RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..65
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..228
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 45..65
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13741contigE-fasciculatus_F_contig13741:51..2321 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13741.2765.1mRNA_E-fasciculatus_F_contig13741.2765.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13741 51..2321 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13741.2765.1 ID=prot_E-fasciculatus_F_contig13741.2765.1|Name=mRNA_E-fasciculatus_F_contig13741.2765.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=228bp
RKVDDLFNISKELMIVTMLFLVLSVGLECGLYFDVSSWTGSNLNFFITAA
AFWVSVVGPLRRLAVDPLAGIKQSRTDRASLARRESRSTMRTASSCVSDS
EDVSSSAKATADIRGSSRAVRVASRKLEEGFYGAGVDEDDDDDDDSCDTT
PTAPTPAAVAAAIAAVATSLYDEPPPANLSPSPSPGNPGAGNWQYQGIHF
CTSRGAGGGGGGGGGGRGRGGGEEMVEA
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