mRNA_E-fasciculatus_F_contig13740.2764.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13740.2764.1
Unique NamemRNA_E-fasciculatus_F_contig13740.2764.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: D8LT45_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT45_ECTSI)

HSP 1 Score: 402 bits (1034), Expect = 8.300e-142
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 1
Query:    1 QVFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA 603
            +VFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALA ADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA
Sbjct:    4 KVFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAAADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA 204          
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: A0A6H5JSZ6_9PHAE (Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ6_9PHAE)

HSP 1 Score: 402 bits (1033), Expect = 6.330e-140
Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 1
Query:    4 VFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA 603
            VFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALA ADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA
Sbjct:  117 VFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAAADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA 316          
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: A0A7S2UWP8_9STRA (Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWP8_9STRA)

HSP 1 Score: 191 bits (484), Expect = 7.150e-57
Identity = 93/190 (48.95%), Postives = 127/190 (66.84%), Query Frame = 1
Query:    1 QVFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLF-EGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGT-GVQDDPMLASL 564
            + F+ G+EY TT+ DGTMI GWD  L  ++ G++A I     Y YG EGV P++ PN+ +  ++E+L  EGNI+NPATF D NPLTPRTP  I  AF+S +RR+A  +A+++ LEG  K   W +++Y FGLF EG+TGE+ P  L P ITFP +  + GVAFY V + GGV T+R    V DD  L+S+
Sbjct:  101 KTFAAGEEYRTTVRDGTMIQGWDIALESMKIGEKAKISLAPEYAYGEEGVAPVIEPNSPVDIELEVLAYEGNILNPATFADNNPLTPRTPQAITAAFESTARRQAREEAELEGLEGFAKFEKWYRSLYFFGLFGEGQTGEKPPILLNPFITFPAIFLVVGVAFYIVFVSGGVITERAAESVLDDASLSSI 290          
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: A0A7S0LHF9_9EUKA (Peptidylprolyl isomerase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LHF9_9EUKA)

HSP 1 Score: 154 bits (390), Expect = 4.490e-43
Identity = 74/178 (41.57%), Postives = 106/178 (59.55%), Query Frame = 1
Query:   13 KGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDD 546
            +G  +  TL +G +I GW+ GL+ ++ G++A + C+ +Y YG +G+ P +PP+A L FDVEL+  +       +F D NPL+PRTP  IA+A++ K   K       D   G+D  + WAK+IYIFG F  E GE  PWYL PLITFP +  + G+ FY V+ LGG+         DD
Sbjct:   95 RGKAFSFTLGEGKVIGGWEVGLSSMKAGEKATLVCSPQYAYGPKGIPPTIPPDATLEFDVELISIKMPQSESTSFADDNPLSPRTPKDIAQAYERKLASKE------DSRTGIDGFLDWAKSIYIFGFFADEKGELPPWYLNPLITFPSIFVVVGIGFYLVVALGGLHRGEVAPYGDD 266          
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: A0A7S2DQU6_9STRA (Peptidylprolyl isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DQU6_9STRA)

HSP 1 Score: 149 bits (377), Expect = 7.670e-41
Identity = 80/194 (41.24%), Postives = 115/194 (59.28%), Query Frame = 1
Query:    4 VFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEA-----PWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGA 570
            VF   +  + T+   + I GW+  L  +R G+ A     S YGYG+ G+ P++PPN  L F+VE+ + +GNI+  +TF D +PL PRTP TI   ++ +   KA+ K      EG++  IAWAKNIY+FGLF GET E A      WYL+P+ITFP M+ I GV F+ V + G +T  R     D+ +L ++ A
Sbjct:  107 VFGDSNGIMVTVGSDSAIDGWNAALRTMRTGEVAEFSVASNYGYGSSGIKPVIPPNTPLHFEVEIQDYKGNILLDSTFEDNSPLIPRTPATIKAEYERRQAEKAVKK------EGIEGFIAWAKNIYVFGLF-GETIETARPEDLAWYLRPVITFPAMVAIVGVTFWLVAISGSITLIREVTDVDNYLLDTVTA 293          
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: A0A7S1D6P4_CYCTE (Peptidylprolyl isomerase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6P4_CYCTE)

HSP 1 Score: 147 bits (372), Expect = 3.010e-40
Identity = 87/202 (43.07%), Postives = 115/202 (56.93%), Query Frame = 1
Query:    7 FSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTS-RYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQD--DPMLASLGAYALRQMGEALA 603
            FS+ +     + DG+MI GWD  L  +  G+RA+++      GYGA G  P++PPNA +  DVE+L++E         +  +P TPRT   IA A+D     KAL      + EGL+  +  AKN Y FGLFEGETG+EAPWYLKP ITFP+   I G  FY V ++GG  T+RG  V D  D ++ S  A A      ALA
Sbjct:   82 FSRSERQQMIVGDGSMIDGWDIVLQSMTIGERAVVRIKDPELGYGAAGFPPLIPPNAEIEIDVEVLDSERQRSLNLDEIMLDPSTPRTAADIAAAYDRLLAEKALQPP---KKEGLEGFLEEAKNWYFFGLFEGETGQEAPWYLKPSITFPLAFLIVGATFY-VCVIGGAITERGAQVTDELDEIILSWNAVATTITTIALA 279          
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: A0A7S0CD00_9STRA (Peptidylprolyl isomerase n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CD00_9STRA)

HSP 1 Score: 147 bits (371), Expect = 5.590e-40
Identity = 78/181 (43.09%), Postives = 112/181 (61.88%), Query Frame = 1
Query:    7 FSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTS-RYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDD 546
            F+K +     + +G MI GW+ GL  +R+G+R++I+ +  RYGYG  GV+P++PPNA +  D+++   E  + +  T   A+PL PRTP +IA A++++  + AL   +  + EGLD  I   K  Y FG FEGETGE+ PWYL P ITFPI   + G AF AV L GG   +RG  V D+
Sbjct:   91 FAKSNAEKMIVGEGLMIDGWEFGLQSMRQGERSVIRVSDPRYGYGISGVSPLIPPNAEIEMDIQVSLVEAGV-DLGTIASADPLKPRTPASIAAAYNTRREQAALDALNETD-EGLDYWIKKIKGYYFFGFFEGETGEKPPWYLTPSITFPIAFAVVGAAF-AVSLAGGAIKERGVQVTDE 268          
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: B7G149_PHATC (Peptidylprolyl isomerase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G149_PHATC)

HSP 1 Score: 146 bits (369), Expect = 2.070e-39
Identity = 81/187 (43.32%), Postives = 118/187 (63.10%), Query Frame = 1
Query:    7 FSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTS-RYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATF-VDANPL-----TPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDD 546
            F++       + DG+MI GW+  L  +R G+R++++ T  + GYGA+GV P+VPPNA L  D+ +L+     + PAT  +D + L     TPRT   I+ AF+++      A+ +V ELEGL+  IA A+N Y FGLFEGETGE APW+L+P ITFP+   I G AFY V  +GG  ++RG  ++D+
Sbjct:  110 FARALSQKVVVGDGSMIVGWEKALRSMRVGERSIVRITDPQLGYGAQGVVPVVPPNAVLELDLNVLD-----VQPATTNIDFDTLAMADTTPRTASEISAAFEARQ----AARGEVVELEGLEYWIAKARNFYFFGLFEGETGERAPWFLRPSITFPLAFLIVGAAFY-VSFIGGAISERGAQIKDE 286          
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: A0A7S1GGZ7_9STRA (Peptidylprolyl isomerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1GGZ7_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.110e-38
Identity = 80/188 (42.55%), Postives = 113/188 (60.11%), Query Frame = 1
Query:    7 FSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTS-RYGYGAEGVTPIVPPNANLVFDVELL---ENEGNIMNPATF----VDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDD 546
            FS+ D       DG MI G+D  +  +++G+RA ++ +  +YGYG  GV P VPP A L  D+E+L   E+ G   +PA      +D     PRTP  IA A++ + ++KA+ + +  E EG++ V+   KN Y FGLFEGETG+EAPWYLKP ITFPI   + G AF+A L  GG  ++RG    D+
Sbjct:   84 FSRSDRQRFVAGDGIMIPGFDVAIRSMKEGERASVRISDPKYGYGEAGVPPFVPPMAQLELDLEVLNIEESVGLSADPAEMGALGMDGPINRPRTPAAIAAAYEQRMKQKAMNEPE--EKEGIEWVVDKVKNSYFFGLFEGETGQEAPWYLKPSITFPIAFLVVGAAFWASLA-GGAISERGMPTTDE 268          
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: A0A7S2I8Q8_9STRA (Peptidylprolyl isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I8Q8_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.350e-38
Identity = 75/182 (41.21%), Postives = 106/182 (58.24%), Query Frame = 1
Query:    7 FSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCT--SRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDD 546
            FSK D+    + DG MI GW+  L  +  G+RA I+ +  +++GYG  GV PIVPPNA +  D+E+L  E  +   A F +  PLTPRTP  I  A++++   K     +    EGL   I    + Y FG FEGETG++APW+L+P ITFP+   + G AFY  L  G ++ +RG  V D+
Sbjct:   88 FSKSDKQRMIVGDGQMIEGWELALLSMNVGERATIRISDPNKFGYGEAGVPPIVPPNAPIEMDMEILGAEERLEMGA-FANNEPLTPRTPKAIRAAYEARKEAKIQDAIENPPAEGLQAWIEKFNSFYFFGFFEGETGQQAPWFLRPSITFPLAFAVVGAAFYISLKFGAIS-ERGAQVTDE 267          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT45_ECTSI8.300e-14299.00Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JSZ6_9PHAE6.330e-14099.50Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CC... [more]
A0A7S2UWP8_9STRA7.150e-5748.95Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japoni... [more]
A0A7S0LHF9_9EUKA4.490e-4341.57Peptidylprolyl isomerase n=1 Tax=Coccolithus braar... [more]
A0A7S2DQU6_9STRA7.670e-4141.24Peptidylprolyl isomerase n=1 Tax=Dictyocha speculu... [more]
A0A7S1D6P4_CYCTE3.010e-4043.07Peptidylprolyl isomerase n=1 Tax=Cyclophora tenuis... [more]
A0A7S0CD00_9STRA5.590e-4043.09Peptidylprolyl isomerase n=2 Tax=Proboscia inermis... [more]
B7G149_PHATC2.070e-3943.32Peptidylprolyl isomerase n=2 Tax=Phaeodactylum tri... [more]
A0A7S1GGZ7_9STRA3.110e-3842.55Peptidylprolyl isomerase n=1 Tax=Skeletonema marin... [more]
A0A7S2I8Q8_9STRA3.350e-3841.21Peptidylprolyl isomerase n=1 Tax=Helicotheca tames... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13740contigE-fasciculatus_F_contig13740:171..2826 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score370.5
Seed ortholog evalue4.4e-100
Seed eggNOG ortholog2880.D8LT45
KEGG koko:K09568
GOsGO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005527,GO:0005528,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006457,GO:0006464,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0061077,GO:0071704,GO:0097159,GO:0140096,GO:1901363,GO:1901564
EggNOG free text desc.Peptidyl-prolyl cis-trans isomerase
EggNOG OGsCOG0545@1,KOG0544@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03110
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionFKBP domain protein
Ec32 orthologEc-08_004100.1
Exons4
Model size625
Cds size555
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13740.2764.1prot_E-fasciculatus_F_contig13740.2764.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13740 190..2775 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927867.7587223-UTR-E-fasciculatus_F_contig13740:170..1891622927867.7587223-UTR-E-fasciculatus_F_contig13740:170..189Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13740 171..189 -
1695995730.6501677-UTR-E-fasciculatus_F_contig13740:170..1891695995730.6501677-UTR-E-fasciculatus_F_contig13740:170..189Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13740 171..189 -
1622927867.8711858-UTR-E-fasciculatus_F_contig13740:2775..28261622927867.8711858-UTR-E-fasciculatus_F_contig13740:2775..2826Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13740 2776..2826 -
1695995730.7005389-UTR-E-fasciculatus_F_contig13740:2775..28261695995730.7005389-UTR-E-fasciculatus_F_contig13740:2775..2826Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13740 2776..2826 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927867.7760148-CDS-E-fasciculatus_F_contig13740:189..3541622927867.7760148-CDS-E-fasciculatus_F_contig13740:189..354Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13740 190..354 -
1695995730.663085-CDS-E-fasciculatus_F_contig13740:189..3541695995730.663085-CDS-E-fasciculatus_F_contig13740:189..354Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13740 190..354 -
1622927867.7910407-CDS-E-fasciculatus_F_contig13740:1058..11811622927867.7910407-CDS-E-fasciculatus_F_contig13740:1058..1181Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13740 1059..1181 -
1695995730.6727283-CDS-E-fasciculatus_F_contig13740:1058..11811695995730.6727283-CDS-E-fasciculatus_F_contig13740:1058..1181Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13740 1059..1181 -
1622927867.8093436-CDS-E-fasciculatus_F_contig13740:1943..21481622927867.8093436-CDS-E-fasciculatus_F_contig13740:1943..2148Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13740 1944..2148 -
1695995730.684316-CDS-E-fasciculatus_F_contig13740:1943..21481695995730.684316-CDS-E-fasciculatus_F_contig13740:1943..2148Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13740 1944..2148 -
1622927867.855664-CDS-E-fasciculatus_F_contig13740:2713..27751622927867.855664-CDS-E-fasciculatus_F_contig13740:2713..2775Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13740 2714..2775 -
1695995730.6925712-CDS-E-fasciculatus_F_contig13740:2713..27751695995730.6925712-CDS-E-fasciculatus_F_contig13740:2713..2775Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13740 2714..2775 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13740.2764.1

>prot_E-fasciculatus_F_contig13740.2764.1 ID=prot_E-fasciculatus_F_contig13740.2764.1|Name=mRNA_E-fasciculatus_F_contig13740.2764.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=185bp
MISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELL
ENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGL
DKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLL
LGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA*
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mRNA from alignment at E-fasciculatus_F_contig13740:171..2826-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13740.2764.1 ID=mRNA_E-fasciculatus_F_contig13740.2764.1|Name=mRNA_E-fasciculatus_F_contig13740.2764.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2656bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13740:171..2826- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGGTGTTCTCTAAGGGAGACGAGTACCTCACCACTCTGGAGGACGGGAC GATGATCAGCGGCTGGGACACAGGACTGGCGGGGCTGCGGAAAGGGGACC GCGCGCTAATCAAGTGCGTGCGTGTGTGTGAGGGAGCAGGGTGTCTTTGT GTTTGGCATATCGACCTCACCCGCTAACCGGCTGACCGGTGAACGGACAT CAGTTCTCAGGGCGGCTGAGAAGGGGGCTGAGAAGGGAAGCGCTTCTCAA GTCCATGACGTGTGTGTGTGCGTGTGTGCCTGGGGAAGTTGTTTTCGTTG GCATGGGCCGTGCCTAACCGGGTGGCCAATGAAAAGAACGTCAACTAAAG GAATCGCGAAAGCGCCTTCCAGTCACGTGGCTCCCCCGGCAGAGTTGTGT GCGTGCATGTCGGTATGTGTGCGTGTTGTCTGCTGGCGCATTGACCGCGC CAACCGGCAGACGAAAGAAAAGGCGTGTCTGCGTGTGCACATGGTTAGCT TCCACCGCCCTAACCTGCTAACCGCTGAAAAGTAATACCAGCCTCGTGAC CGAAGGAATCGTGTGTGTGCGCGTGTGTTGCGGTGTTGTTTGTGTTGTCT ATGCGAAAAGGAGTTCGGCGCCCTTTTTTTGATGGACCGACGATGGCATG AACTCGTTCTGAAAAAAAACAAACACAGGTGCACCTCGCGGTATGGGTAC GGCGCCGAGGGCGTCACCCCCATCGTTCCCCCAAACGCCAACCTGGTTTT CGACGTGGAACTCCTGGAGAACGAGGGCAACATCATGAACCCGGCCACGT TCGTCGACGCGAACCCGCTCACCCCCCGTACCCCGGACACCATCGCCGAG GCTTTCGACTCCAAGAGCAGGCGGAAGGCCTTGGTGAGCTTCTCATTGTG CATTGTTTGCCGTTTTAGAAGCAGCGTTTTGGGACTGCTGTAGGCTATCT CCTGCCAGGTCACGCTGCCTTCAGAGAAAAGTTTCATGCCGCCTGGTACT GCTGTAGCACTCGGAGAGCTTAAACCATTACAATGTGGTACTTACTGTAT GCATACGAAGCGGTACTCAAGTCGGCAGCGAGCGGTGTAGAAGGTGTACT GTGTGCGTGTGTGGTGAGATCTGGTGGTGACAAATGGGGTGCGCACCGTT GCGACGGCTCGTGTGTAGCAGGGGGAAGAGCTGGAGGAGTACTCTCGACG TGATGATTATTGTCGCTAGTGCTCCGGTTCAGTCGGCCGCGGGCTGATTG GGTCGTTGTCGCACTCGTGTGGGGTTTGCTTCTTACAAACCGGTGTTTAC GCCTCCTCCGCTTGTCTGTCTTGTTTGTTTCTTTTGTCGCGCGTTCTGTT ATTTTCCGCCTTTGTTATTACTGTTTAACTGGGTAACAAAAGTTGAGCTC CCGCTCAAAATCTTCTTCGGACCAACCTTTTGCACTCCATCCCTCTCCGC TACATTCCCGTTCCAACCCGTCTTCGCCTTTGCCTTTGGGTTCGTCGCTC TCCCTTCAGCTGCCATCTGAAGCTTCGCTGTGCATCTTGTTTTTCTCTGT GCGGTGGTGGGTGTTTTGCCCCCACCTACTTCTTTTCTGTTCACACCGAT TTCCGCCCCCCTCTTGTTTGCTTGTTGCTTGCAAATGCAATTCAGGCGAA GGCCGACGTGGACGAGCTAGAGGGGCTCGACAAGGTGATTGCATGGGCCA AGAACATCTACATCTTCGGGCTGTTCGAGGGGGAGACCGGCGAGGAGGCC CCCTGGTACCTCAAGCCGGTGAGTCAGTCCTGTCCTGTCGTGTAAGTCAT CTCCGTCTTGTTTTCTTGGTCATGTCCGTCTTGTGTTCGTAGTCATGTCC GTCTTGTGTTCGTAGTCATCTCCGTCTTGTTTTCGTAATCCTCTCCGTCG TAGTCTTGTCCGTCTTGTGTTTTGTAGTCTTGTGTTCGCAGTCATGTCCA TTTTGTTTTCCGTCTTGTTTTCGTGGTCATCTCCGTCTTTTCGTAGTCAT GTCCGTTGTTGTCGTTCATGTTGGGTGTACGGCAGCGTTGAGCGTGTATC GCTGTTGCTGTTGTTTGGTAGTGGTCGTTCGTTATGTTTTGTTGTTTTCA ATGGGACAACGACTTGGGTTCCGGCAGCTAGTGCCCTGTGTTTCCTTCGC TGCTGCTGCTGCTGATGCTGCTGCTGCTGCTGCTGCTGATACTGATGATG CTGCTGCTGCTGCTCGCGTGTCATTGGCAACACGAAACGTCTCCGCTACC GACCCTTCCCCGGAACACAAACACGCGCAACGCCACGCGCTCCAACATCA TCATCACCCACGCGCTTGACCAGCGATCGATCCATCTAGCCCCTGCCTAC CCCTCGCAGCTGTTTCCCTCTGTACAAGTGAGCAACGTTCGATCCCCCCT TAACAAACACCCTTGCGTTGTCGTCCGTTCTCTGTCGTGCGGTGGGCCGC CTGGTGGTATAAAAAAACGCAGCTCATCACTTTTCCCATCATGATCACCA TCTGCGGCGTGGCGTTCTACGCGGTCCTTCTCTTGGGAGGCGTGACGACG GACAGGGGTACCGGGGTGCAGGACGACCCAATGCTGGCCTCCCTCGGGGC GTACGCGTTGCGACAAATGGGCGAGGCGCTAGCGTAAAACCACCCACGAA GTGCAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13740:171..2826-

>mRNA_E-fasciculatus_F_contig13740.2764.1 ID=mRNA_E-fasciculatus_F_contig13740.2764.1|Name=mRNA_E-fasciculatus_F_contig13740.2764.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1110bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13740:171..2826- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGATCAGCGGCTGGGACACAGGACTGGCGGGGCTGCGGAAAGGGGACCG
CGCGCTAATCAAATGATCAGCGGCTGGGACACAGGACTGGCGGGGCTGCG
GAAAGGGGACCGCGCGCTAATCAAGTGCACCTCGCGGTATGGGTACGGCG
CCGAGGGCGTCACCCCCATCGTTCCCCCAAACGCCAACCTGGTTTTCGAC
GTGGAACTCCTGGAGAACGAGGGCAACATCATGAACCCGGCCACGTTCGT
CGACGCGAACCCGCTCACCCCCCGTACCCCGGACACCATCGCCGAGGCTT
TCGACTCCAAGAGCAGGCGGAAGGCCTTGGTGCACCTCGCGGTATGGGTA
CGGCGCCGAGGGCGTCACCCCCATCGTTCCCCCAAACGCCAACCTGGTTT
TCGACGTGGAACTCCTGGAGAACGAGGGCAACATCATGAACCCGGCCACG
TTCGTCGACGCGAACCCGCTCACCCCCCGTACCCCGGACACCATCGCCGA
GGCTTTCGACTCCAAGAGCAGGCGGAAGGCCTTGGCGAAGGCCGACGTGG
ACGAGCTAGAGGGGCTCGACAAGGTGATTGCATGGGCCAAGAACATCTAC
ATCTTCGGGCTGTTCGAGGGGGAGACCGGCGAGGAGGCCCCCTGGTACCT
CAAGCCGGCGAAGGCCGACGTGGACGAGCTAGAGGGGCTCGACAAGGTGA
TTGCATGGGCCAAGAACATCTACATCTTCGGGCTGTTCGAGGGGGAGACC
GGCGAGGAGGCCCCCTGGTACCTCAAGCCGCTCATCACTTTTCCCATCAT
GATCACCATCTGCGGCGTGGCGTTCTACGCGGTCCTTCTCTTGGGAGGCG
TGACGACGGACAGGGGTACCGGGGTGCAGGACGACCCAATGCTGGCCTCC
CTCGGGGCGTACGCGTTGCGACAAATGGGCGAGGCGCTAGCGTAACTCAT
CACTTTTCCCATCATGATCACCATCTGCGGCGTGGCGTTCTACGCGGTCC
TTCTCTTGGGAGGCGTGACGACGGACAGGGGTACCGGGGTGCAGGACGAC
CCAATGCTGGCCTCCCTCGGGGCGTACGCGTTGCGACAAATGGGCGAGGC
GCTAGCGTAA
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