mRNA_E-fasciculatus_F_contig13740.2764.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: D8LT45_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT45_ECTSI) HSP 1 Score: 402 bits (1034), Expect = 8.300e-142 Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 1
Query: 1 QVFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA 603
+VFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALA ADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA
Sbjct: 4 KVFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAAADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA 204
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: A0A6H5JSZ6_9PHAE (Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ6_9PHAE) HSP 1 Score: 402 bits (1033), Expect = 6.330e-140 Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 1
Query: 4 VFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA 603
VFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALA ADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA
Sbjct: 117 VFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAAADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA 316
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: A0A7S2UWP8_9STRA (Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWP8_9STRA) HSP 1 Score: 191 bits (484), Expect = 7.150e-57 Identity = 93/190 (48.95%), Postives = 127/190 (66.84%), Query Frame = 1
Query: 1 QVFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLF-EGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGT-GVQDDPMLASL 564
+ F+ G+EY TT+ DGTMI GWD L ++ G++A I Y YG EGV P++ PN+ + ++E+L EGNI+NPATF D NPLTPRTP I AF+S +RR+A +A+++ LEG K W +++Y FGLF EG+TGE+ P L P ITFP + + GVAFY V + GGV T+R V DD L+S+
Sbjct: 101 KTFAAGEEYRTTVRDGTMIQGWDIALESMKIGEKAKISLAPEYAYGEEGVAPVIEPNSPVDIELEVLAYEGNILNPATFADNNPLTPRTPQAITAAFESTARRQAREEAELEGLEGFAKFEKWYRSLYFFGLFGEGQTGEKPPILLNPFITFPAIFLVVGVAFYIVFVSGGVITERAAESVLDDASLSSI 290
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: A0A7S0LHF9_9EUKA (Peptidylprolyl isomerase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LHF9_9EUKA) HSP 1 Score: 154 bits (390), Expect = 4.490e-43 Identity = 74/178 (41.57%), Postives = 106/178 (59.55%), Query Frame = 1
Query: 13 KGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDD 546
+G + TL +G +I GW+ GL+ ++ G++A + C+ +Y YG +G+ P +PP+A L FDVEL+ + +F D NPL+PRTP IA+A++ K K D G+D + WAK+IYIFG F E GE PWYL PLITFP + + G+ FY V+ LGG+ DD
Sbjct: 95 RGKAFSFTLGEGKVIGGWEVGLSSMKAGEKATLVCSPQYAYGPKGIPPTIPPDATLEFDVELISIKMPQSESTSFADDNPLSPRTPKDIAQAYERKLASKE------DSRTGIDGFLDWAKSIYIFGFFADEKGELPPWYLNPLITFPSIFVVVGIGFYLVVALGGLHRGEVAPYGDD 266
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: A0A7S2DQU6_9STRA (Peptidylprolyl isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DQU6_9STRA) HSP 1 Score: 149 bits (377), Expect = 7.670e-41 Identity = 80/194 (41.24%), Postives = 115/194 (59.28%), Query Frame = 1
Query: 4 VFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEA-----PWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGA 570
VF + + T+ + I GW+ L +R G+ A S YGYG+ G+ P++PPN L F+VE+ + +GNI+ +TF D +PL PRTP TI ++ + KA+ K EG++ IAWAKNIY+FGLF GET E A WYL+P+ITFP M+ I GV F+ V + G +T R D+ +L ++ A
Sbjct: 107 VFGDSNGIMVTVGSDSAIDGWNAALRTMRTGEVAEFSVASNYGYGSSGIKPVIPPNTPLHFEVEIQDYKGNILLDSTFEDNSPLIPRTPATIKAEYERRQAEKAVKK------EGIEGFIAWAKNIYVFGLF-GETIETARPEDLAWYLRPVITFPAMVAIVGVTFWLVAISGSITLIREVTDVDNYLLDTVTA 293
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: A0A7S1D6P4_CYCTE (Peptidylprolyl isomerase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6P4_CYCTE) HSP 1 Score: 147 bits (372), Expect = 3.010e-40 Identity = 87/202 (43.07%), Postives = 115/202 (56.93%), Query Frame = 1
Query: 7 FSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTS-RYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQD--DPMLASLGAYALRQMGEALA 603
FS+ + + DG+MI GWD L + G+RA+++ GYGA G P++PPNA + DVE+L++E + +P TPRT IA A+D KAL + EGL+ + AKN Y FGLFEGETG+EAPWYLKP ITFP+ I G FY V ++GG T+RG V D D ++ S A A ALA
Sbjct: 82 FSRSERQQMIVGDGSMIDGWDIVLQSMTIGERAVVRIKDPELGYGAAGFPPLIPPNAEIEIDVEVLDSERQRSLNLDEIMLDPSTPRTAADIAAAYDRLLAEKALQPP---KKEGLEGFLEEAKNWYFFGLFEGETGQEAPWYLKPSITFPLAFLIVGATFY-VCVIGGAITERGAQVTDELDEIILSWNAVATTITTIALA 279
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: A0A7S0CD00_9STRA (Peptidylprolyl isomerase n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CD00_9STRA) HSP 1 Score: 147 bits (371), Expect = 5.590e-40 Identity = 78/181 (43.09%), Postives = 112/181 (61.88%), Query Frame = 1
Query: 7 FSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTS-RYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDD 546
F+K + + +G MI GW+ GL +R+G+R++I+ + RYGYG GV+P++PPNA + D+++ E + + T A+PL PRTP +IA A++++ + AL + + EGLD I K Y FG FEGETGE+ PWYL P ITFPI + G AF AV L GG +RG V D+
Sbjct: 91 FAKSNAEKMIVGEGLMIDGWEFGLQSMRQGERSVIRVSDPRYGYGISGVSPLIPPNAEIEMDIQVSLVEAGV-DLGTIASADPLKPRTPASIAAAYNTRREQAALDALNETD-EGLDYWIKKIKGYYFFGFFEGETGEKPPWYLTPSITFPIAFAVVGAAF-AVSLAGGAIKERGVQVTDE 268
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: B7G149_PHATC (Peptidylprolyl isomerase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G149_PHATC) HSP 1 Score: 146 bits (369), Expect = 2.070e-39 Identity = 81/187 (43.32%), Postives = 118/187 (63.10%), Query Frame = 1
Query: 7 FSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTS-RYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATF-VDANPL-----TPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDD 546
F++ + DG+MI GW+ L +R G+R++++ T + GYGA+GV P+VPPNA L D+ +L+ + PAT +D + L TPRT I+ AF+++ A+ +V ELEGL+ IA A+N Y FGLFEGETGE APW+L+P ITFP+ I G AFY V +GG ++RG ++D+
Sbjct: 110 FARALSQKVVVGDGSMIVGWEKALRSMRVGERSIVRITDPQLGYGAQGVVPVVPPNAVLELDLNVLD-----VQPATTNIDFDTLAMADTTPRTASEISAAFEARQ----AARGEVVELEGLEYWIAKARNFYFFGLFEGETGERAPWFLRPSITFPLAFLIVGAAFY-VSFIGGAISERGAQIKDE 286
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: A0A7S1GGZ7_9STRA (Peptidylprolyl isomerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1GGZ7_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.110e-38 Identity = 80/188 (42.55%), Postives = 113/188 (60.11%), Query Frame = 1
Query: 7 FSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTS-RYGYGAEGVTPIVPPNANLVFDVELL---ENEGNIMNPATF----VDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDD 546
FS+ D DG MI G+D + +++G+RA ++ + +YGYG GV P VPP A L D+E+L E+ G +PA +D PRTP IA A++ + ++KA+ + + E EG++ V+ KN Y FGLFEGETG+EAPWYLKP ITFPI + G AF+A L GG ++RG D+
Sbjct: 84 FSRSDRQRFVAGDGIMIPGFDVAIRSMKEGERASVRISDPKYGYGEAGVPPFVPPMAQLELDLEVLNIEESVGLSADPAEMGALGMDGPINRPRTPAAIAAAYEQRMKQKAMNEPE--EKEGIEWVVDKVKNSYFFGLFEGETGQEAPWYLKPSITFPIAFLVVGAAFWASLA-GGAISERGMPTTDE 268
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Match: A0A7S2I8Q8_9STRA (Peptidylprolyl isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I8Q8_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.350e-38 Identity = 75/182 (41.21%), Postives = 106/182 (58.24%), Query Frame = 1
Query: 7 FSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCT--SRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAKADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDD 546
FSK D+ + DG MI GW+ L + G+RA I+ + +++GYG GV PIVPPNA + D+E+L E + A F + PLTPRTP I A++++ K + EGL I + Y FG FEGETG++APW+L+P ITFP+ + G AFY L G ++ +RG V D+
Sbjct: 88 FSKSDKQRMIVGDGQMIEGWELALLSMNVGERATIRISDPNKFGYGEAGVPPIVPPNAPIEMDMEILGAEERLEMGA-FANNEPLTPRTPKAIRAAYEARKEAKIQDAIENPPAEGLQAWIEKFNSFYFFGFFEGETGQQAPWFLRPSITFPLAFAVVGAAFYISLKFGAIS-ERGAQVTDE 267 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13740.2764.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13740.2764.1 >prot_E-fasciculatus_F_contig13740.2764.1 ID=prot_E-fasciculatus_F_contig13740.2764.1|Name=mRNA_E-fasciculatus_F_contig13740.2764.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=185bp MISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLback to top mRNA from alignment at E-fasciculatus_F_contig13740:171..2826- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13740.2764.1 ID=mRNA_E-fasciculatus_F_contig13740.2764.1|Name=mRNA_E-fasciculatus_F_contig13740.2764.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2656bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13740:171..2826- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13740:171..2826- >mRNA_E-fasciculatus_F_contig13740.2764.1 ID=mRNA_E-fasciculatus_F_contig13740.2764.1|Name=mRNA_E-fasciculatus_F_contig13740.2764.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1110bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13740:171..2826- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |