mRNA_E-fasciculatus_F_contig13731.2760.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: D7FRF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF7_ECTSI) HSP 1 Score: 537 bits (1383), Expect = 1.390e-189 Identity = 290/334 (86.83%), Postives = 296/334 (88.62%), Query Frame = 1
Query: 1 MSARRSPRLSPGKATTATEPVAGGGGHDARXXXXXXXXXXXXXXXXXXXXXARAASLEGKRPDKEEEDGPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNRIYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFDAQGTAAAAAAAS-PRSPRIEGDVSMEATNGNLDGTVRLRQMMGGLVGRYDRDGIEEDYELAEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
MSARRSPRLSPGKATTA EPVAGGGG AR XXXX RAAS EGK+PDKEEE+GPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPN++YPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGF AQGTAAA PRSPRIEGDVSMEATN LDGTVRLRQMMGGLVGRYDRDG EEDYELAEPDDALKRL L VEETGVCKVVRERAYSTTWHPS DKLLLAVGDKV GNVGLWTVDETDD DAAHGVFQFKPHTGAVPRMTFDPLDGNK+LSTSYDGTVR+MDVEKGAFEQV
Sbjct: 1 MSARRSPRLSPGKATTAIEPVAGGGGRGARGPPNAKRLRRATAPEAAXXXXXRAASQEGKKPDKEEENGPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNKVYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFGAQGTAAAXXXXXXPRSPRIEGDVSMEATNSTLDGTVRLRQMMGGLVGRYDRDGNEEDYELAEPDDALKRLSCLKVEETGVCKVVRERAYSTTWHPSGDKLLLAVGDKV-GNVGLWTVDETDDRDAAHGVFQFKPHTGAVPRMTFDPLDGNKLLSTSYDGTVRRMDVEKGAFEQV 333
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: A0A6H5K3Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y8_9PHAE) HSP 1 Score: 376 bits (965), Expect = 2.580e-127 Identity = 241/341 (70.67%), Postives = 256/341 (75.07%), Query Frame = 1
Query: 1 MSARRSPRLSPGKATTATEPVAGGGGHDARXXXXXXXXXXXXXXXXXXXXXARAASLEGKRPDKEEEDGPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNRIYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFDAQGTAAAAAAA----SPRSPRIEGDVSMEATNGNLDGTVRLRQMMGGLVGRYDRDGIEEDYELAEPDDALKRLRGLNVEETG-----VCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQ 996
MSARRSPRLSPGK TATEPVAGGGGH ARXXXXXXXXXXXXXXXXXXXXX E+GPSAYELQRLAKMKENAMMMASLGLGGAKD+MRKAVNSDAAQRAKARGLGPRPN++YPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFD QGT AAA SPRSPRIEGDVSME TNG LDGTVRLRQ G + + L P + + + VC + R ++ + + K VGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVR+MDVEKGAFEQ
Sbjct: 1 MSARRSPRLSPGKVMTATEPVAGGGGHGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENGPSAYELQRLAKMKENAMMMASLGLGGAKDSMRKAVNSDAAQRAKARGLGPRPNKVYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFDGQGTTAAAXXXXXXXSPRSPRIEGDVSMEETNGTLDGTVRLRQA-GHCIACF----------LLTPKARERAVTSASAARCSKCTMPVCALSRRKSDADECGVNPSKA------DEVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRRMDVEKGAFEQ 324
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: K3W540_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W540_GLOUD) HSP 1 Score: 104 bits (260), Expect = 2.610e-21 Identity = 83/274 (30.29%), Postives = 139/274 (50.73%), Query Frame = 1
Query: 202 DGPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNRIYPAR-SRESARVRGKTPEGLPMEDPEEAFNRRRQGFDAQGTAAAAAAASPRSPRIEGDVSMEATN-GNLDGTVRLRQMMGGLVGR-----YDRDGIEE-DYELAEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
D + YE +RL ++ N M S+G+ AK R AV A +A ++G+ + P + +R+S R++GK E L + + R GF+A+ PR+ R + +++ EA N + G L + GG+ + D G+E +Y+L+ D + K ER YS +H +DKL++A GDK GN+ LW+ DE +DA V ++PHT + ++ F P D K++S S+DG++R+ D++ GAF ++
Sbjct: 30 DEMTEYERKRLENIQRNLDFMKSMGVSTAKIAARTAVG---AVKAPSKGIPTKRKPSEPPQPTRKSRRIQGKQSENLALPASWPVNDVPRAGFNAED---------PRTGRFDVNLTAEAVNVSSASGRSFLDSIAGGVEEKESDLKVDATGVETVNYQLSSED---------------IVKATEERIYSIVFHSRQDKLVVATGDKR-GNLSLWSADEP--SDAEDVVVMYRPHTLPITQLHFAPEDSTKLVSASFDGSIREFDLKAGAFSEL 273
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: A0A7S1J3R6_9EUGL (Guanine nucleotide-binding protein subunit beta-like protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J3R6_9EUGL) HSP 1 Score: 103 bits (258), Expect = 6.350e-21 Identity = 103/290 (35.52%), Postives = 140/290 (48.28%), Query Frame = 1
Query: 154 ARAASLEGKRPDKEEEDGPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGP--RPNRIYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFD---AQGTAAAAAAASPRSPR-IEGDVSMEATNG-NLDGTVRLRQMMGGLVGRYDRDGIEEDY-ELAEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
AR A G PD EE S E +R++ M NA + +LGL +K R V+ ++A +GLG R + R S R+ G P G + D E A + G D A AA A +S R I +++E+TN + G L + D + + AE L RG ET V KVV ER YS +HPS KLL+A GDK GN+GLW VD + D VF +KPH + + + P D +K+++ SYDGTVR MDV KG F ++
Sbjct: 69 ARKAKARG--PDGEE---LSELEAERISIMANNAAFLENLGLADSKSAFRAVVDQKTVKKAAVKGLGSTRRTSSYSDEPPRRSGRLTGAKPSGFYI-DSETASRIQIAGPDGVLADNAAARGKEAVRQSAREIPEILTLESTNTTDKHGADFLASLCALSSQAVDAAPVSDSVLTYAEKVSRLDVDRG----ET-VAKVVPERIYSCAFHPSTSKLLVAAGDKQ-GNLGLWNVDAAAEVDP---VFLYKPHGSVIGALQYKPDDSSKLVTWSYDGTVRCMDVVKGEFARM 343
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: UPI001113D61F (WD repeat-containing protein 76 n=1 Tax=Echeneis naucrates TaxID=173247 RepID=UPI001113D61F) HSP 1 Score: 102 bits (255), Expect = 1.420e-20 Identity = 84/265 (31.70%), Postives = 130/265 (49.06%), Query Frame = 1
Query: 205 GPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNRIYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFDAQGTAAAAAAASPRSPRIEGDVSMEATNGNLDGTVRLRQMMGGLVGRYDRDGIEEDYELAEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
G SAYEL+RL +++N ++S+ L A + +++ +QR R P + P +R+S R++ K E L + PE++ A ++P + G + M+ N G +L + L R+ +E +L E LK +R + E V KVV++R S T+HP LL+A GDK G VGLW +D +D GV F PHT +V + F ++L+ SYDG++R MDVEK F+ V
Sbjct: 80 GLSAYELERLENIRQNQAFLSSINLLQATEEIKELARQKPSQRGLVRSQAPA-KEMMP--TRKSLRLQHKDAEPLTL-PPEQSL---------------AVNSTPAIKKCAGPLPMDPVNMEEGG--KLPSQLLQLCSEDTREERKEAQDLKEYQSNLKNMR---ITEDKVAKVVKDRILSATFHPCNSSLLMAAGDKW-GRVGLWNLDGGWGDD---GVLLFHPHTRSVGCLAFSRAQPTQLLTLSYDGSLRCMDVEKTVFDDV 316
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: E9H8N0_DAPPU (WD repeat-containing protein 76 n=3 Tax=Daphnia TaxID=6668 RepID=E9H8N0_DAPPU) HSP 1 Score: 101 bits (251), Expect = 5.230e-20 Identity = 52/125 (41.60%), Postives = 76/125 (60.80%), Query Frame = 1
Query: 637 IEEDYEL----AEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
+E++ EL A+ D LK ++ ++ E GV KV + R YS WHPS KLL+AVGD+ GN+G W +D+ DD GV FK H + +TFD + ++L+TSYDG VR +D+ F++V
Sbjct: 221 LEKEGELEKLPADQQDFLKLMKSFSINEEGVAKVSKSRIYSLAWHPSNCKLLVAVGDRD-GNIGFWDIDKLDDKH--QGVRAFKVHNQPINCITFDKFNSTRLLTTSYDGYVRCLDLHSNVFDEV 342
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: A0A087YDR8_POEFO (WD repeat-containing protein 76 n=7 Tax=Poeciliinae TaxID=586240 RepID=A0A087YDR8_POEFO) HSP 1 Score: 99.0 bits (245), Expect = 3.300e-19 Identity = 83/271 (30.63%), Postives = 128/271 (47.23%), Query Frame = 1
Query: 187 DKEEEDGPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNRIYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFDAQGTAAAAAAASPRSPRIEGDVSMEATNGNLDGTVRLRQMMGGLVGRYDRDGIEEDYELAEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
D+ + G SAYEL+RL +K+N ++S+ L A++++ + +QR GL P+ R+S R++ K E L + ++ D+ A P ++ E G LRQ+ D EE +L + + + L+ L + E V KVV++R +S +HP LLLA GDK G +GLW + +D GV F+PH+ V M F N++LS SYDG++R MDVEK F+ V
Sbjct: 119 DQTNDGGLSAYELERLENIKKNQAFLSSINLLQAREDLHQTTRPKPSQR----GLRPQSAVKEALPPRKSLRLQNKPAEKLTLP---------KEPIDSLHPDLARILKKPSGALHMNPINQE---GGFKLPPELRQLCS-------EDSKEEQMKL-DLKEYISALKSLKMGEDDVVKVVKDRIFSAAFHPCSSSLLLAAGDKW-GKIGLWNMGAEWGDD---GVLLFEPHSRPVGSMAFSRCHPNQLLSASYDGSLRCMDVEKAVFDDV 361
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: UPI001176A884 (WD repeat-containing protein 76 n=1 Tax=Salarias fasciatus TaxID=181472 RepID=UPI001176A884) HSP 1 Score: 98.2 bits (243), Expect = 5.560e-19 Identity = 86/273 (31.50%), Postives = 129/273 (47.25%), Query Frame = 1
Query: 184 PDKEEEDGPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNRIYPARSRESARVRGKTPEGLPME-DPEEAFNRRRQGFDAQGTAAAAAAASPRSPRIEGDVSMEATNGNLDGTVRLRQMMGGLVGRYDRDGIEEDYELAEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
P +E G SAYEL+RL +++N ++S+ L A D + + + R AR + P R+S R++ K E L + +P F R + + P P V+ME DG V+L + L + + + +L E ALK +R + E V KVV+ R +S +HP LL+A GDK G +GLW + +D GV F+PHT V M F +++LS SYDG++R MDV+K F+ V
Sbjct: 84 PPADESGGLSAYELERLENIRQNQAFLSSINLFQATDELNQVTKPKPSHRGLARPKATVKEVLPP---RKSLRLQNKEAEVLTLPPEPSGTFVSERVSPEKK----------PAGPLPMDPVNME------DG-VKLPSQLLELCSQDPSEDRKTIPDLKEYCSALKNMR---ITEAQVAKVVKHRIFSAAFHPCTSSLLVAAGDKW-GQIGLWNLGGDWGDD---GVLLFEPHTRPVTCMAFSVAQPSQLLSLSYDGSLRCMDVQKSVFDDV 329
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: UPI0009E33BCB (WD repeat-containing protein 76-like isoform X1 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E33BCB) HSP 1 Score: 97.8 bits (242), Expect = 7.280e-19 Identity = 83/285 (29.12%), Postives = 142/285 (49.82%), Query Frame = 1
Query: 211 SAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLG--PRPNRIYPAR-SRESARVRGKTPEGL-----PME-----DPEEAFNRRRQGFDAQG----TAAAAAAASPRSPRIEGDVSMEATNGNLDGT-----VRLRQMMGGLVGRYDRDGIEEDYELAEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
S YE R ++ N A L L AK ++ A++S + K RGL + +++ P +R+S R+R K P G+ P+E D F + A G ++ A+ SPR G + M+ N N++ T V ++ ++ + ++ E+ + + K L L ++E + K+V R +S +HP++ K L+ GDK GN+G+W VD T +D GV+ ++PH+ + M+FDP + K+L+ SYDGT+R D + F++V
Sbjct: 32 SEYERMRQENIRRNNEYFAGLNLSQAKLDLNMAMSSSGTTKVKERGLSRPKKSSKVGPLLPTRQSLRLRNKDPNGIALPDQPLEISQPVDEHRTFRYFPRPVKAVGLKRISSVVASQTFTESPRKLGPLEMKPCN-NVEETHAQEFVDELTVLANILHKA-KENREDTVKDMNVESYKKCLGSLKIKEGHIAKLVPHRIFSMAFHPAKYKTLVVAGDKW-GNLGIWDVDSTKGDD---GVYLYEPHSRPINCMSFDPDNCGKLLTCSYDGTLRCCDFKSATFQEV 310
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: A0A3Q2YBT1_HIPCM (WD repeat-containing protein 76 n=3 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2YBT1_HIPCM) HSP 1 Score: 97.4 bits (241), Expect = 8.140e-19 Identity = 91/271 (33.58%), Postives = 135/271 (49.82%), Query Frame = 1
Query: 205 GPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRP---NRIYPARSRESARVRGKTPE--GLPMEDPEEAFNRRRQGFDAQGTAAAAAAASPRSPRIEGDVSMEATNGNLDGTVRLRQMMGGLVGRYDRD-GIEEDYELAEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
G SAYEL+RL +++N ++SL L A ++++ S A ++ RGL +P + P SR S R++ K E LP E E + ++ + G + ME N +G+ Q + R+ G+E D L E LK++R + E V KVV+ER +S +HP+ LL+A GDK G VG+W+V +D GV F+PHT V + F ++LS SYDG++R MDVEKGAF+ V
Sbjct: 27 GLSAYELERLENIRQNQAFLSSLKLFQASKDLKQ---SSARRQPSKRGLTRKPAVVKEVVP--SRRSLRLQNKQAEVLTLPPEPRETEVVK-------------------QTKKPPGPLPMEPVN-MAEGSELPPQFLQLCSEVSSRERGVELD--LKEYCSLLKKMR---ISEDQVAKVVKERIFSAAFHPASTSLLMAAGDKY-GKVGIWSVGGDWGDD---GVLLFEPHTRPVGCLAFSKAHPAQLLSLSYDGSLRCMDVEKGAFDDV 263 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13731.2760.1 >prot_E-fasciculatus_F_contig13731.2760.1 ID=prot_E-fasciculatus_F_contig13731.2760.1|Name=mRNA_E-fasciculatus_F_contig13731.2760.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=334bp MSARRSPRLSPGKATTATEPVAGGGGHDARGSPKAKRQRRATATEAAASGback to top mRNA from alignment at E-fasciculatus_F_contig13731:49..3512- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13731.2760.1 ID=mRNA_E-fasciculatus_F_contig13731.2760.1|Name=mRNA_E-fasciculatus_F_contig13731.2760.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3464bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13731:49..3512- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13731:49..3512- >mRNA_E-fasciculatus_F_contig13731.2760.1 ID=mRNA_E-fasciculatus_F_contig13731.2760.1|Name=mRNA_E-fasciculatus_F_contig13731.2760.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2004bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13731:49..3512- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |