mRNA_E-fasciculatus_F_contig13731.2760.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13731.2760.1
Unique NamemRNA_E-fasciculatus_F_contig13731.2760.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: D7FRF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF7_ECTSI)

HSP 1 Score: 537 bits (1383), Expect = 1.390e-189
Identity = 290/334 (86.83%), Postives = 296/334 (88.62%), Query Frame = 1
Query:    1 MSARRSPRLSPGKATTATEPVAGGGGHDARXXXXXXXXXXXXXXXXXXXXXARAASLEGKRPDKEEEDGPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNRIYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFDAQGTAAAAAAAS-PRSPRIEGDVSMEATNGNLDGTVRLRQMMGGLVGRYDRDGIEEDYELAEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
            MSARRSPRLSPGKATTA EPVAGGGG  AR                 XXXX RAAS EGK+PDKEEE+GPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPN++YPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGF AQGTAAA      PRSPRIEGDVSMEATN  LDGTVRLRQMMGGLVGRYDRDG EEDYELAEPDDALKRL  L VEETGVCKVVRERAYSTTWHPS DKLLLAVGDKV GNVGLWTVDETDD DAAHGVFQFKPHTGAVPRMTFDPLDGNK+LSTSYDGTVR+MDVEKGAFEQV
Sbjct:    1 MSARRSPRLSPGKATTAIEPVAGGGGRGARGPPNAKRLRRATAPEAAXXXXXRAASQEGKKPDKEEENGPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNKVYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFGAQGTAAAXXXXXXPRSPRIEGDVSMEATNSTLDGTVRLRQMMGGLVGRYDRDGNEEDYELAEPDDALKRLSCLKVEETGVCKVVRERAYSTTWHPSGDKLLLAVGDKV-GNVGLWTVDETDDRDAAHGVFQFKPHTGAVPRMTFDPLDGNKLLSTSYDGTVRRMDVEKGAFEQV 333          
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: A0A6H5K3Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y8_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 2.580e-127
Identity = 241/341 (70.67%), Postives = 256/341 (75.07%), Query Frame = 1
Query:    1 MSARRSPRLSPGKATTATEPVAGGGGHDARXXXXXXXXXXXXXXXXXXXXXARAASLEGKRPDKEEEDGPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNRIYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFDAQGTAAAAAAA----SPRSPRIEGDVSMEATNGNLDGTVRLRQMMGGLVGRYDRDGIEEDYELAEPDDALKRLRGLNVEETG-----VCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQ 996
            MSARRSPRLSPGK  TATEPVAGGGGH ARXXXXXXXXXXXXXXXXXXXXX               E+GPSAYELQRLAKMKENAMMMASLGLGGAKD+MRKAVNSDAAQRAKARGLGPRPN++YPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFD QGT AAA       SPRSPRIEGDVSME TNG LDGTVRLRQ  G  +  +          L  P    + +   +          VC + R ++ +     +  K         VGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVR+MDVEKGAFEQ
Sbjct:    1 MSARRSPRLSPGKVMTATEPVAGGGGHGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENGPSAYELQRLAKMKENAMMMASLGLGGAKDSMRKAVNSDAAQRAKARGLGPRPNKVYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFDGQGTTAAAXXXXXXXSPRSPRIEGDVSMEETNGTLDGTVRLRQA-GHCIACF----------LLTPKARERAVTSASAARCSKCTMPVCALSRRKSDADECGVNPSKA------DEVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRRMDVEKGAFEQ 324          
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: K3W540_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W540_GLOUD)

HSP 1 Score: 104 bits (260), Expect = 2.610e-21
Identity = 83/274 (30.29%), Postives = 139/274 (50.73%), Query Frame = 1
Query:  202 DGPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNRIYPAR-SRESARVRGKTPEGLPMEDPEEAFNRRRQGFDAQGTAAAAAAASPRSPRIEGDVSMEATN-GNLDGTVRLRQMMGGLVGR-----YDRDGIEE-DYELAEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
            D  + YE +RL  ++ N   M S+G+  AK   R AV    A +A ++G+  +     P + +R+S R++GK  E L +       +  R GF+A+          PR+ R + +++ EA N  +  G   L  + GG+  +      D  G+E  +Y+L+  D               + K   ER YS  +H  +DKL++A GDK  GN+ LW+ DE   +DA   V  ++PHT  + ++ F P D  K++S S+DG++R+ D++ GAF ++
Sbjct:   30 DEMTEYERKRLENIQRNLDFMKSMGVSTAKIAARTAVG---AVKAPSKGIPTKRKPSEPPQPTRKSRRIQGKQSENLALPASWPVNDVPRAGFNAED---------PRTGRFDVNLTAEAVNVSSASGRSFLDSIAGGVEEKESDLKVDATGVETVNYQLSSED---------------IVKATEERIYSIVFHSRQDKLVVATGDKR-GNLSLWSADEP--SDAEDVVVMYRPHTLPITQLHFAPEDSTKLVSASFDGSIREFDLKAGAFSEL 273          
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: A0A7S1J3R6_9EUGL (Guanine nucleotide-binding protein subunit beta-like protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J3R6_9EUGL)

HSP 1 Score: 103 bits (258), Expect = 6.350e-21
Identity = 103/290 (35.52%), Postives = 140/290 (48.28%), Query Frame = 1
Query:  154 ARAASLEGKRPDKEEEDGPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGP--RPNRIYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFD---AQGTAAAAAAASPRSPR-IEGDVSMEATNG-NLDGTVRLRQMMGGLVGRYDRDGIEEDY-ELAEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
            AR A   G  PD EE    S  E +R++ M  NA  + +LGL  +K   R  V+    ++A  +GLG   R +       R S R+ G  P G  + D E A   +  G D   A   AA    A  +S R I   +++E+TN  +  G   L  +        D   + +     AE    L   RG    ET V KVV ER YS  +HPS  KLL+A GDK  GN+GLW VD   + D    VF +KPH   +  + + P D +K+++ SYDGTVR MDV KG F ++
Sbjct:   69 ARKAKARG--PDGEE---LSELEAERISIMANNAAFLENLGLADSKSAFRAVVDQKTVKKAAVKGLGSTRRTSSYSDEPPRRSGRLTGAKPSGFYI-DSETASRIQIAGPDGVLADNAAARGKEAVRQSAREIPEILTLESTNTTDKHGADFLASLCALSSQAVDAAPVSDSVLTYAEKVSRLDVDRG----ET-VAKVVPERIYSCAFHPSTSKLLVAAGDKQ-GNLGLWNVDAAAEVDP---VFLYKPHGSVIGALQYKPDDSSKLVTWSYDGTVRCMDVVKGEFARM 343          
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: UPI001113D61F (WD repeat-containing protein 76 n=1 Tax=Echeneis naucrates TaxID=173247 RepID=UPI001113D61F)

HSP 1 Score: 102 bits (255), Expect = 1.420e-20
Identity = 84/265 (31.70%), Postives = 130/265 (49.06%), Query Frame = 1
Query:  205 GPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNRIYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFDAQGTAAAAAAASPRSPRIEGDVSMEATNGNLDGTVRLRQMMGGLVGRYDRDGIEEDYELAEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
            G SAYEL+RL  +++N   ++S+ L  A + +++      +QR   R   P    + P  +R+S R++ K  E L +  PE++                A  ++P   +  G + M+  N    G  +L   +  L     R+  +E  +L E    LK +R   + E  V KVV++R  S T+HP    LL+A GDK  G VGLW +D    +D   GV  F PHT +V  + F      ++L+ SYDG++R MDVEK  F+ V
Sbjct:   80 GLSAYELERLENIRQNQAFLSSINLLQATEEIKELARQKPSQRGLVRSQAPA-KEMMP--TRKSLRLQHKDAEPLTL-PPEQSL---------------AVNSTPAIKKCAGPLPMDPVNMEEGG--KLPSQLLQLCSEDTREERKEAQDLKEYQSNLKNMR---ITEDKVAKVVKDRILSATFHPCNSSLLMAAGDKW-GRVGLWNLDGGWGDD---GVLLFHPHTRSVGCLAFSRAQPTQLLTLSYDGSLRCMDVEKTVFDDV 316          
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: E9H8N0_DAPPU (WD repeat-containing protein 76 n=3 Tax=Daphnia TaxID=6668 RepID=E9H8N0_DAPPU)

HSP 1 Score: 101 bits (251), Expect = 5.230e-20
Identity = 52/125 (41.60%), Postives = 76/125 (60.80%), Query Frame = 1
Query:  637 IEEDYEL----AEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
            +E++ EL    A+  D LK ++  ++ E GV KV + R YS  WHPS  KLL+AVGD+  GN+G W +D+ DD     GV  FK H   +  +TFD  +  ++L+TSYDG VR +D+    F++V
Sbjct:  221 LEKEGELEKLPADQQDFLKLMKSFSINEEGVAKVSKSRIYSLAWHPSNCKLLVAVGDRD-GNIGFWDIDKLDDKH--QGVRAFKVHNQPINCITFDKFNSTRLLTTSYDGYVRCLDLHSNVFDEV 342          
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: A0A087YDR8_POEFO (WD repeat-containing protein 76 n=7 Tax=Poeciliinae TaxID=586240 RepID=A0A087YDR8_POEFO)

HSP 1 Score: 99.0 bits (245), Expect = 3.300e-19
Identity = 83/271 (30.63%), Postives = 128/271 (47.23%), Query Frame = 1
Query:  187 DKEEEDGPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNRIYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFDAQGTAAAAAAASPRSPRIEGDVSMEATNGNLDGTVRLRQMMGGLVGRYDRDGIEEDYELAEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
            D+  + G SAYEL+RL  +K+N   ++S+ L  A++++ +      +QR    GL P+         R+S R++ K  E L +          ++  D+     A     P        ++ E   G       LRQ+          D  EE  +L +  + +  L+ L + E  V KVV++R +S  +HP    LLLA GDK  G +GLW +     +D   GV  F+PH+  V  M F     N++LS SYDG++R MDVEK  F+ V
Sbjct:  119 DQTNDGGLSAYELERLENIKKNQAFLSSINLLQAREDLHQTTRPKPSQR----GLRPQSAVKEALPPRKSLRLQNKPAEKLTLP---------KEPIDSLHPDLARILKKPSGALHMNPINQE---GGFKLPPELRQLCS-------EDSKEEQMKL-DLKEYISALKSLKMGEDDVVKVVKDRIFSAAFHPCSSSLLLAAGDKW-GKIGLWNMGAEWGDD---GVLLFEPHSRPVGSMAFSRCHPNQLLSASYDGSLRCMDVEKAVFDDV 361          
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: UPI001176A884 (WD repeat-containing protein 76 n=1 Tax=Salarias fasciatus TaxID=181472 RepID=UPI001176A884)

HSP 1 Score: 98.2 bits (243), Expect = 5.560e-19
Identity = 86/273 (31.50%), Postives = 129/273 (47.25%), Query Frame = 1
Query:  184 PDKEEEDGPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNRIYPARSRESARVRGKTPEGLPME-DPEEAFNRRRQGFDAQGTAAAAAAASPRSPRIEGDVSMEATNGNLDGTVRLRQMMGGLVGRYDRDGIEEDYELAEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
            P  +E  G SAYEL+RL  +++N   ++S+ L  A D + +      + R  AR        + P   R+S R++ K  E L +  +P   F   R   + +          P  P     V+ME      DG V+L   +  L  +   +  +   +L E   ALK +R   + E  V KVV+ R +S  +HP    LL+A GDK  G +GLW +     +D   GV  F+PHT  V  M F     +++LS SYDG++R MDV+K  F+ V
Sbjct:   84 PPADESGGLSAYELERLENIRQNQAFLSSINLFQATDELNQVTKPKPSHRGLARPKATVKEVLPP---RKSLRLQNKEAEVLTLPPEPSGTFVSERVSPEKK----------PAGPLPMDPVNME------DG-VKLPSQLLELCSQDPSEDRKTIPDLKEYCSALKNMR---ITEAQVAKVVKHRIFSAAFHPCTSSLLVAAGDKW-GQIGLWNLGGDWGDD---GVLLFEPHTRPVTCMAFSVAQPSQLLSLSYDGSLRCMDVQKSVFDDV 329          
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: UPI0009E33BCB (WD repeat-containing protein 76-like isoform X1 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E33BCB)

HSP 1 Score: 97.8 bits (242), Expect = 7.280e-19
Identity = 83/285 (29.12%), Postives = 142/285 (49.82%), Query Frame = 1
Query:  211 SAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLG--PRPNRIYPAR-SRESARVRGKTPEGL-----PME-----DPEEAFNRRRQGFDAQG----TAAAAAAASPRSPRIEGDVSMEATNGNLDGT-----VRLRQMMGGLVGRYDRDGIEEDYELAEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
            S YE  R   ++ N    A L L  AK ++  A++S    + K RGL    + +++ P   +R+S R+R K P G+     P+E     D    F    +   A G    ++  A+     SPR  G + M+  N N++ T     V    ++  ++ +  ++  E+  +    +   K L  L ++E  + K+V  R +S  +HP++ K L+  GDK  GN+G+W VD T  +D   GV+ ++PH+  +  M+FDP +  K+L+ SYDGT+R  D +   F++V
Sbjct:   32 SEYERMRQENIRRNNEYFAGLNLSQAKLDLNMAMSSSGTTKVKERGLSRPKKSSKVGPLLPTRQSLRLRNKDPNGIALPDQPLEISQPVDEHRTFRYFPRPVKAVGLKRISSVVASQTFTESPRKLGPLEMKPCN-NVEETHAQEFVDELTVLANILHKA-KENREDTVKDMNVESYKKCLGSLKIKEGHIAKLVPHRIFSMAFHPAKYKTLVVAGDKW-GNLGIWDVDSTKGDD---GVYLYEPHSRPINCMSFDPDNCGKLLTCSYDGTLRCCDFKSATFQEV 310          
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Match: A0A3Q2YBT1_HIPCM (WD repeat-containing protein 76 n=3 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2YBT1_HIPCM)

HSP 1 Score: 97.4 bits (241), Expect = 8.140e-19
Identity = 91/271 (33.58%), Postives = 135/271 (49.82%), Query Frame = 1
Query:  205 GPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRP---NRIYPARSRESARVRGKTPE--GLPMEDPEEAFNRRRQGFDAQGTAAAAAAASPRSPRIEGDVSMEATNGNLDGTVRLRQMMGGLVGRYDRD-GIEEDYELAEPDDALKRLRGLNVEETGVCKVVRERAYSTTWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQV 999
            G SAYEL+RL  +++N   ++SL L  A  ++++   S A ++   RGL  +P     + P  SR S R++ K  E   LP E  E    +                   ++ +  G + ME  N   +G+    Q +        R+ G+E D  L E    LK++R   + E  V KVV+ER +S  +HP+   LL+A GDK  G VG+W+V     +D   GV  F+PHT  V  + F      ++LS SYDG++R MDVEKGAF+ V
Sbjct:   27 GLSAYELERLENIRQNQAFLSSLKLFQASKDLKQ---SSARRQPSKRGLTRKPAVVKEVVP--SRRSLRLQNKQAEVLTLPPEPRETEVVK-------------------QTKKPPGPLPMEPVN-MAEGSELPPQFLQLCSEVSSRERGVELD--LKEYCSLLKKMR---ISEDQVAKVVKERIFSAAFHPASTSLLMAAGDKY-GKVGIWSVGGDWGDD---GVLLFEPHTRPVGCLAFSKAHPAQLLSLSYDGSLRCMDVEKGAFDDV 263          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13731.2760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRF7_ECTSI1.390e-18986.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3Y8_9PHAE2.580e-12770.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K3W540_GLOUD2.610e-2130.29Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S1J3R6_9EUGL6.350e-2135.52Guanine nucleotide-binding protein subunit beta-li... [more]
UPI001113D61F1.420e-2031.70WD repeat-containing protein 76 n=1 Tax=Echeneis n... [more]
E9H8N0_DAPPU5.230e-2041.60WD repeat-containing protein 76 n=3 Tax=Daphnia Ta... [more]
A0A087YDR8_POEFO3.300e-1930.63WD repeat-containing protein 76 n=7 Tax=Poeciliina... [more]
UPI001176A8845.560e-1931.50WD repeat-containing protein 76 n=1 Tax=Salarias f... [more]
UPI0009E33BCB7.280e-1929.12WD repeat-containing protein 76-like isoform X1 n=... [more]
A0A3Q2YBT1_HIPCM8.140e-1933.58WD repeat-containing protein 76 n=3 Tax=Hippocampu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13731contigE-fasciculatus_F_contig13731:49..3512 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score545.8
Seed ortholog evalue1.4e-152
Seed eggNOG ortholog2880.D7FRF7
KEGG rclassRC00508
KEGG koko:K08678
KEGG ReactionR01384
KEGG Pathwayko00520,ko01100,map00520,map01100
KEGG ModuleM00361
GOsGO:0000228,GO:0000785,GO:0000790,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0008150,GO:0031974,GO:0031981,GO:0034399,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051726,GO:0065007,GO:0070013,GO:0080134,GO:0080135,GO:0097159,GO:1901363,GO:1901976,GO:2000001,GO:2001020
EggNOG free text desc.cellular response to DNA damage stimulus
EggNOG OGsKOG4328@1,KOG4328@2759
EC4.1.1.35
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionWD40-repeat-containing domain
Ec32 orthologEc-08_000770.1
Exons5
Model size1002
Cds size1002
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13731.2760.1prot_E-fasciculatus_F_contig13731.2760.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13731 49..3512 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927867.3208034-CDS-E-fasciculatus_F_contig13731:48..2491622927867.3208034-CDS-E-fasciculatus_F_contig13731:48..249Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13731 49..249 -
1695995730.4786067-CDS-E-fasciculatus_F_contig13731:48..2491695995730.4786067-CDS-E-fasciculatus_F_contig13731:48..249Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13731 49..249 -
1622927867.3320272-CDS-E-fasciculatus_F_contig13731:595..7131622927867.3320272-CDS-E-fasciculatus_F_contig13731:595..713Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13731 596..713 -
1695995730.4910016-CDS-E-fasciculatus_F_contig13731:595..7131695995730.4910016-CDS-E-fasciculatus_F_contig13731:595..713Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13731 596..713 -
1622927867.3420658-CDS-E-fasciculatus_F_contig13731:1326..14121622927867.3420658-CDS-E-fasciculatus_F_contig13731:1326..1412Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13731 1327..1412 -
1695995730.4999437-CDS-E-fasciculatus_F_contig13731:1326..14121695995730.4999437-CDS-E-fasciculatus_F_contig13731:1326..1412Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13731 1327..1412 -
1622927867.3580115-CDS-E-fasciculatus_F_contig13731:1933..21411622927867.3580115-CDS-E-fasciculatus_F_contig13731:1933..2141Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13731 1934..2141 -
1695995730.509272-CDS-E-fasciculatus_F_contig13731:1933..21411695995730.509272-CDS-E-fasciculatus_F_contig13731:1933..2141Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13731 1934..2141 -
1622927867.372938-CDS-E-fasciculatus_F_contig13731:3123..35121622927867.372938-CDS-E-fasciculatus_F_contig13731:3123..3512Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13731 3124..3512 -
1695995730.519351-CDS-E-fasciculatus_F_contig13731:3123..35121695995730.519351-CDS-E-fasciculatus_F_contig13731:3123..3512Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13731 3124..3512 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13731.2760.1

>prot_E-fasciculatus_F_contig13731.2760.1 ID=prot_E-fasciculatus_F_contig13731.2760.1|Name=mRNA_E-fasciculatus_F_contig13731.2760.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=334bp
MSARRSPRLSPGKATTATEPVAGGGGHDARGSPKAKRQRRATATEAAASG
GARAASLEGKRPDKEEEDGPSAYELQRLAKMKENAMMMASLGLGGAKDNM
RKAVNSDAAQRAKARGLGPRPNRIYPARSRESARVRGKTPEGLPMEDPEE
AFNRRRQGFDAQGTAAAAAAASPRSPRIEGDVSMEATNGNLDGTVRLRQM
MGGLVGRYDRDGIEEDYELAEPDDALKRLRGLNVEETGVCKVVRERAYST
TWHPSRDKLLLAVGDKVVGNVGLWTVDETDDNDAAHGVFQFKPHTGAVPR
MTFDPLDGNKMLSTSYDGTVRKMDVEKGAFEQVI
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mRNA from alignment at E-fasciculatus_F_contig13731:49..3512-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13731.2760.1 ID=mRNA_E-fasciculatus_F_contig13731.2760.1|Name=mRNA_E-fasciculatus_F_contig13731.2760.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3464bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13731:49..3512- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGTGCGAGGCGTTCGCCCAGACTGTCTCCAGGAAAAGCAACGACCGC CACCGAACCAGTAGCAGGCGGCGGTGGCCATGACGCTCGCGGGTCGCCGA AGGCCAAGCGGCAGAGACGCGCTACCGCCACCGAGGCCGCAGCTAGCGGC GGCGCTCGTGCTGCAAGCCTAGAGGGAAAGAGGCCGGACAAGGAAGAGGA GGACGGACCCTCGGCCTACGAGCTGCAGAGGCTCGCCAAGATGAAAGAGA ACGCGATGATGATGGCCTCGCTGGGCCTCGGCGGCGCCAAGGATAACATG CGCAAGGCTGTCAACAGCGACGCGGCGCAGAGGGCGAAGGCGCGGGGCCT GGGGCCCCGGCCGAACAGGATCTATCCTGCCAGAAGCAGGTGAGTATGTG CCGGTTGTTGGTGATTTCTGATTTTTCTATGCAAATTATGTCGAACTGTA AACCATTGGGGTGCAACGGACTTGAGAAGGAGGTGAACGAAGGGGAAAGA AAACACCCAAACAAGTGCAGACTGCGTCACCACTTGAGAATCTGGGAGTT GCGAGCTTCAGACTCAAGAAAATCGAAGCGTAAGAAGGTTATTACAAGCG GGAGAGATTCTAGCCCAAAACCAGAAGGTTTCCGAGGTTTCTGACTGCAC CACCAGGGCGTAGGCTATGCCCTCGCTAAACGATATGAAAACAACACGGA AAGGCCCCGTAGTGGGTCAAGATATGTCGATGTGCTTATTCGTAGATGTG TTTGTGTGTGTTAATTTATTCTATGGGCATTTCGTTTAGTCTTACTGTGT TTTTTTAGGTTTTGTTTTGCGTTCGTCTCTCTTACTTTTTTGGTTTTGGG GAAGACACACATACACCGCATCAGTGTCCACAAGCGGTGCTCGAAGGCAC ACCTTATGTAGCGGGTCTCGTACCAGCAGCACACTCATGCTAGGTTTCAT ATTTACGGTTTATGCTTGCGCACCAACCACGCAGAGCAACCAAGGTTTGG GAGTTGGGGGGATGGAACACCGCGTACAGCTTTCCGTGTAAGACTGCTGT CTGCAGAATTTTCTGTTGGTTGGCTGAGATTCGCTGAGCTGCTCGAGTCA AATCTCGTCAGCTGTGTGAGCTGTTGAGCTTGGGAAACGTCACAACCAAC AAGCAACCAGCTTTCGGTGCGGTCTTGCTGCCTTCTTTTATTTTCAACTT TTGCATAATCCCTTGATGACGCTGCTGTTCTCTCATGAGCCCACCCATCC TTTCACTGCAAGACTCTTAATGCTTATGATTTTCATCTCGCTCTTATAGC TTTGAGCTCAATAAAGTCACATCTGATTGTTCGTCTGACCACGAACCTTA TCATGCCACCCCAACACGCAGGGAGTCTGCGCGCGTGCGAGGCAAAACGC CGGAGGGTTTGCCGATGGAGGACCCCGAAGAGGCGTTCAATCGCAGGAGG CAGGGCTTCGACGCTCAGGGAACGGCTGCGGCGGCGGCAGCGGCATCACC TAGGTCGCCTCGCATTGAGGGAGACGTTTCCATGGAGGCAACCAACGGCA ACCTAGACGGGACTGTGCGCCTGAGACAGGTACGATAACGCTGCAATATC CTCGACTCTTCCGGAATCTTTGGACTTATGACATTATCAGGGTTTGGCGT GTCGGGGGGTCCCGTCCGATGGATACGGCGGGTGTCTATGGTTTGATTGG GACTGCTGTGACGTAGTGATCGCTGTGACCTTTCGAGCCATCGTTCTGCT CAGGCGGGTAATCGTATCGCCTGGTTGCTGCTCACCCCGAAGGCCCGGGA AAGGGCGGCCACCTCGGCTCGCGCCGCCCGTTGTGCGAAGTGCGCAATGC GGCGTAACTCCTCGCAAGGCGGATGAGTTAGTGCCGTTTGAGTCGCTCGC CAGGACGGGCTGGAACTGAGATTCGTTTCGGCTGGAAGAGAAGGCCGTTG TACCGATTATCGAACAAAAGATGACCCGCAGCCTGGTGTTGTGCAACTTT GCGTGCGCAGATAAGTGACTCGTATGCTTCGAATCTTGTCTCACTATTGT TATACGTTGTCGTGACGCCTCAACGTTGCTGTGTGTGTGGTGCTCGTAAG ATGATGGGCGGGCTTGTTGGTCGTTACGACAGGGACGGCATCGAAGAGGA CTATGAGCTAGCCGAGCCGGACGACGCCTTGAAAAGGTATTGCTAGTTAT AAACCTCGTTTTGAGTGCTGCTCCTATTTCAGTGCTGCGATTCCTGTTTC AGTGCTGCAATCCCTATTCCATTGCTGTCTAGAAAATATCTTATAAGTGG TTGGGGGACGTTGCTGGATAGGCCAATCAAACCAAATTCTGGATTGTTGT GAGGTCGGCACAACCGCTTCTCGCTGTCCGTTTCTGTTTCGATGACGGAC AGCTTCCTGATGAAGGGTATGTTTTGATCAGCAGCAACGCCTTGAGAATG CTCGGTGTGTTTCTGTGTGCTGGCTCTGGAGAACCAACTGTGGTGGGGCG CATCGGATATACATGCGCAATACAATCGACTAAAAATCAAAATACACTAA AAAAGTCTGGCCAGTGTAGGAAATTTGTCGCAACAGGTACGTCTTGAACT GCACAAGAGTTTTTCTTTTGTTTTTCGTGGCGCGAAGAGAGGCAGTGTCG TTTTTTTCTGCGGTGTGTTCAGTCAAGGCGACAAGTTCTCCTCGCCTCAC TTGGCTGCTGTTGTTGCGGAGAGCTGCTTTAAATTGATGGCCGAGTCCTC GCCTTGCGTCATGCGCGTGCGCTTGCCTGGCGGACGGCCTACTCTAAAGG TTACGCGGCCTAAATGTGGAGGAGACGGGCGTGTGCAAGGTTGTGAGGGA GCGAGCGTATAGCACGACGTGGCACCCTTCCAGGGACAAGCTTCTTCTTG CTGTGGGAGACAAGGTCGTTAGATGTTAACAGTGGGAGACAAGAGATACG TTAATATATCGTGCTGTGGGAGACGAGGTTGCTAGATACCAGTGTTAGCA GTGGGAGACAAGGGATAGTGTTAAAATATCTTGCAGTGGGAACCAAGGTT GTTAGACATGTTTACAAGGCTTACTGTGGGAGACAAGACTGTAAAGTGTT AATAAACTTGCTGCAGACATCTGCACGAGGATGGAAAAATTGTTTTCTGT AGCGCAGCTACGAATTGAGAAAAAACACGATCTCTACCTACCGACACCTT GATGTCTCTGTTTTGTTTTTTAATGTCCGGGCATTGTATGTACCGCGGTT TGTTTTCCTAAAGGTGGGAAACGTGGGGTTGTGGACCGTGGATGAGACCG ACGACAACGACGCAGCGCATGGGGTGTTCCAGTTCAAGCCTCACACGGGG GCAGTGCCCCGCATGACTTTCGACCCATTGGACGGCAACAAGATGCTCTC CACCTCCTACGACGGGACTGTCAGAAAGATGGACGTCGAGAAGGGTGCCT TCGAACAGGTGATC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13731:49..3512-

>mRNA_E-fasciculatus_F_contig13731.2760.1 ID=mRNA_E-fasciculatus_F_contig13731.2760.1|Name=mRNA_E-fasciculatus_F_contig13731.2760.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2004bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13731:49..3512- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGTGCGAGGCGTTCGCCCAGACTGTCTCCAGGAAAAGCAACGACCGC
CACCGAACCAGTAGCAGGCGGCGGTGGCCATGACGCTCGCGGGTCGCCGA
AGGCCAAGCGGCAGAGACGCGCTACCGCCACCGAGGCCGCAGCTAGCGGC
GGCGCTCGTGCTGCAAGCCTAGAGGGAAAGAGGCCGGACAAGGAAGAGGA
GGACGGACCCTCGGCCTACGAGCTGCAGAGGCTCGCCAAGATGAAAGAGA
ACGCGATGATGATGGCCTCGCTGGGCCTCGGCGGCGCCAAGGATAACATG
CGCAAGGCTGTCAACAGCGACGCGGCGCAGAGGGCGAAGGCGCGGGGCCT
GGGGCCCCGGCCGAACAGGATCTATCCTGCCAGAAGCAGATGAGTGCGAG
GCGTTCGCCCAGACTGTCTCCAGGAAAAGCAACGACCGCCACCGAACCAG
TAGCAGGCGGCGGTGGCCATGACGCTCGCGGGTCGCCGAAGGCCAAGCGG
CAGAGACGCGCTACCGCCACCGAGGCCGCAGCTAGCGGCGGCGCTCGTGC
TGCAAGCCTAGAGGGAAAGAGGCCGGACAAGGAAGAGGAGGACGGACCCT
CGGCCTACGAGCTGCAGAGGCTCGCCAAGATGAAAGAGAACGCGATGATG
ATGGCCTCGCTGGGCCTCGGCGGCGCCAAGGATAACATGCGCAAGGCTGT
CAACAGCGACGCGGCGCAGAGGGCGAAGGCGCGGGGCCTGGGGCCCCGGC
CGAACAGGATCTATCCTGCCAGAAGCAGGGAGTCTGCGCGCGTGCGAGGC
AAAACGCCGGAGGGTTTGCCGATGGAGGACCCCGAAGAGGCGTTCAATCG
CAGGAGGCAGGGCTTCGACGCTCAGGGAACGGCTGCGGCGGCGGCAGCGG
CATCACCTAGGTCGCCTCGCATTGAGGGAGACGTTTCCATGGAGGCAACC
AACGGCAACCTAGACGGGACTGTGCGCCTGAGACAGGGAGTCTGCGCGCG
TGCGAGGCAAAACGCCGGAGGGTTTGCCGATGGAGGACCCCGAAGAGGCG
TTCAATCGCAGGAGGCAGGGCTTCGACGCTCAGGGAACGGCTGCGGCGGC
GGCAGCGGCATCACCTAGGTCGCCTCGCATTGAGGGAGACGTTTCCATGG
AGGCAACCAACGGCAACCTAGACGGGACTGTGCGCCTGAGACAGATGATG
GGCGGGCTTGTTGGTCGTTACGACAGGGACGGCATCGAAGAGGACTATGA
GCTAGCCGAGCCGGACGACGCCTTGAAAAGATGATGGGCGGGCTTGTTGG
TCGTTACGACAGGGACGGCATCGAAGAGGACTATGAGCTAGCCGAGCCGG
ACGACGCCTTGAAAAGGTTACGCGGCCTAAATGTGGAGGAGACGGGCGTG
TGCAAGGTTGTGAGGGAGCGAGCGTATAGCACGACGTGGCACCCTTCCAG
GGACAAGCTTCTTCTTGCTGTGGGAGACAAGGTCGTTACGCGGCCTAAAT
GTGGAGGAGACGGGCGTGTGCAAGGTTGTGAGGGAGCGAGCGTATAGCAC
GACGTGGCACCCTTCCAGGGACAAGCTTCTTCTTGCTGTGGGAGACAAGG
TCGTGGGAAACGTGGGGTTGTGGACCGTGGATGAGACCGACGACAACGAC
GCAGCGCATGGGGTGTTCCAGTTCAAGCCTCACACGGGGGCAGTGCCCCG
CATGACTTTCGACCCATTGGACGGCAACAAGATGCTCTCCACCTCCTACG
ACGGGACTGTCAGAAAGATGGACGTCGAGAAGGGTGCCTTCGAACAGGTG
ATCGTGGGAAACGTGGGGTTGTGGACCGTGGATGAGACCGACGACAACGA
CGCAGCGCATGGGGTGTTCCAGTTCAAGCCTCACACGGGGGCAGTGCCCC
GCATGACTTTCGACCCATTGGACGGCAACAAGATGCTCTCCACCTCCTAC
GACGGGACTGTCAGAAAGATGGACGTCGAGAAGGGTGCCTTCGAACAGGT
GATC
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