mRNA_E-fasciculatus_F_contig1372.2751.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1372.2751.1 vs. uniprot
Match: D7FHS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS7_ECTSI) HSP 1 Score: 864 bits (2232), Expect = 5.350e-306 Identity = 530/627 (84.53%), Postives = 539/627 (85.96%), Query Frame = 2
Query: 131 MSALFDDAERFDSLIVVGDTIRRVKDTTEEHVGPGAYSPSMAKSKDFGHIGVSTSRRSNMDPPLSPRSTEHQRHVTGSVVRDGVWFHPSPFLTAGPGPGAYSPSIISSDYERGRTAKPSSGAVGRQAWDLRGSAGGIPLSNFRNGFSVSSSMGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQIRRERSLSFSGTSSTAKAFLSLASSMARTGPPRSRKEAASGRPDLHLLARHTYPAPGGVGGRGGDGRSASPGRERRCVSPASAMLSSMRGRAAAAANGNGAAATCGFRSGGMSTDTGSRSLSPKTNRGRSGFAIRGAAGGRYGRGDGIGGVGRGSATFHPVSQQXXXXXXXXXXX-QARTTSSGASRGCRSLPPRGRD------GGGRVSPPLRAEPGSSRRKNTNSVSISAPSSPRNSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASYTFDYFGLAGQRGAWRGLESVSAARAEVGIEEPKDNSVDHNRNAQASAGGSGGGDEAQSAARDTVLEGGRGRXXXXXXAKGRRGGPGSLLPERVPAKGVCSPPKETRDDLHTYYAAVNRTTAALDSTSGSSNLPPPPSPRPLQ 1990
MSALFDDAERFDSLIVVGDT+RRVKD TEEHVGPGAYSPSMAKSKDFGHIGVSTSRRSNMDPPLSPRSTEHQRH TGSVVRDGVWFHPSPFL AGPGPGAYSPSIISSD+ERGRTAKPSSGAVGRQAWDLRGSAGG PLSNFRNGFSVSSSMGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQIRRERSLSFSGTSSTAKAFLSLASSMART P RS KEAAS RPDLHLL R+TYPAPGGVGGRGGDGRS SPG+ERR TDTGSRSLSPK NRGRSGFAIRGAAGGRYGRGDGIGGVG G ATFHP+SQQXXXXXXXXXXX QARTTSSGASR CRSL PRGRD GGGR SPPLRAE GSSRRKN SVSISAPSSPRNSRXXXXXXXXXXXXXXXXXXXXXXXXXXX DASYTFDYFGLAGQRG WRGLE+VSAARAEVGIE KDN HN N QASA GS GG+EAQSAA XXXXXXA+GRRG PGSLLPERVPAKGVCSPPKETRDDLHTYYAAVNRTTAALDSTSGS NLPPPPSPR L+
Sbjct: 1 MSALFDDAERFDSLIVVGDTVRRVKDATEEHVGPGAYSPSMAKSKDFGHIGVSTSRRSNMDPPLSPRSTEHQRHATGSVVRDGVWFHPSPFLAAGPGPGAYSPSIISSDHERGRTAKPSSGAVGRQAWDLRGSAGGTPLSNFRNGFSVSSSMGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQIRRERSLSFSGTSSTAKAFLSLASSMARTAPTRSNKEAASCRPDLHLLGRNTYPAPGGVGGRGGDGRSTSPGKERR-------------------------------------TDTGSRSLSPKANRGRSGFAIRGAAGGRYGRGDGIGGVGHGPATFHPISQQXXXXXXXXXXXRQARTTSSGASRECRSLSPRGRDSGGRPVGGGRASPPLRAEHGSSRRKNATSVSISAPSSPRNSRXXXXXXXXXXXXXXXXXXXXXXXXXXXSDASYTFDYFGLAGQRGVWRGLEAVSAARAEVGIEATKDNDDGHNSNKQASATGSRGGNEAQSAAGXXXXXXXXXXXXXXXXARGRRGEPGSLLPERVPAKGVCSPPKETRDDLHTYYAAVNRTTAALDSTSGS-NLPPPPSPRALR 589
BLAST of mRNA_E-fasciculatus_F_contig1372.2751.1 vs. uniprot
Match: A0A6H5JYF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF7_9PHAE) HSP 1 Score: 471 bits (1211), Expect = 1.360e-153 Identity = 313/500 (62.60%), Postives = 326/500 (65.20%), Query Frame = 2
Query: 584 MGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQIRRERSLSFSGTSSTAKAFLSLASSMARTGPPRSRKEAASGRPDLHLLARHTYPAPGGVGGRGGDGRSASPGRERRCVSPASAMLSSMRGRAAAAANGNGAAATCGFRSGGM--------------------STDTGSRSLSPKTNRGRSGFAIRGAAGGR----YGRGDGIGGVGRGSATFHPVSQQXXXXXXXXXXXQARTTSSGASRG---CRSLPPRGRDGGGRVSPPLRAEPGSSRRKNTNSVSISAPSSPRNSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASYTFDYFGLAGQRGAWRGLESVSAARAEVGIEEPKDNSVDHNRNAQASAGGSGGGDEAQSAARDTVLEGGRGRXXXXXXAKGRRGGPGSLLPERVPAKGVCSPPKETRDDLHTYYAAVNRTTAALDSTSGSSNLPPPPSPRPLQQGPV 2002
MGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQ+RRERSLSFSGTSSTAKAFLSLASSMART P RS KEAAS RPDLHLL R+TYPAPGGVGGRGGDGRS PG+ERRCVSPASAMLSS+RGRAAAAANGNGAAAT G RSGGM + GS+S P G + A+ A + RG+ H A T + G S C P G SPPLRAEPGSSRRKNT SVSISAPSSPRNSR DASYTFDYFGLAGQRG WRGLES+SAARAEVGIE KDN XXXXXXAKGRRGGPGSLLPER PAKGVCSPPKETRDDLHTYYAAVNRTTAALDSTSGS NLPPPPSPR L+QGP
Sbjct: 1 MGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQVRRERSLSFSGTSSTAKAFLSLASSMARTNPTRSNKEAASCRPDLHLLTRNTYPAPGGVGGRGGDGRSTFPGKERRCVSPASAMLSSLRGRAAAAANGNGAAATFGLRSGGMRFFIVHLWPMAPAASLRRRTAAAPGSQSAGPPV--GATAAAMTSVASAAVPSLFTLFLSSSSSSRGAVARHGRQAAGRAGGAVPCHRMAVTAAGGRSAAGGRCSLGQPVGA-----ASPPLRAEPGSSRRKNTTSVSISAPSSPRNSRRSTAKKYAPTTGGITGAVVGGRGGSNGSDASYTFDYFGLAGQRGVWRGLESISAARAEVGIEATKDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXAKGRRGGPGSLLPERAPAKGVCSPPKETRDDLHTYYAAVNRTTAALDSTSGS-NLPPPPSPRALRQGPA 491 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1372.2751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1372.2751.1 >prot_E-fasciculatus_F_contig1372.2751.1 ID=prot_E-fasciculatus_F_contig1372.2751.1|Name=mRNA_E-fasciculatus_F_contig1372.2751.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=625bp MSALFDDAERFDSLIVVGDTIRRVKDTTEEHVGPGAYSPSMAKSKDFGHIback to top mRNA from alignment at E-fasciculatus_F_contig1372:8682..17780- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1372.2751.1 ID=mRNA_E-fasciculatus_F_contig1372.2751.1|Name=mRNA_E-fasciculatus_F_contig1372.2751.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9099bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1372:8682..17780- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1372:8682..17780- >mRNA_E-fasciculatus_F_contig1372.2751.1 ID=mRNA_E-fasciculatus_F_contig1372.2751.1|Name=mRNA_E-fasciculatus_F_contig1372.2751.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3750bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1372:8682..17780- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |