mRNA_E-fasciculatus_F_contig13705.2742.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13705.2742.1 vs. uniprot
Match: D8LNE1_ECTSI (Galactokinase (Galactose kinase) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNE1_ECTSI) HSP 1 Score: 199 bits (505), Expect = 2.900e-58 Identity = 99/109 (90.83%), Postives = 102/109 (93.58%), Query Frame = 1
Query: 1 HGDDLGSLSVVGEGGVEERVPTAGELLVMARDLYDETFGPPEDVRHVCAGYAPGRVNLIGEHTDYQGGFVLPLALERGTVVYGVGRLVDSDEPTAEGGDRGLCRVVSQT 327
HGD S+SVV EGG+EERVPTAGELLVMARDLYD+TFGPPEDVRHV AGYAPGRVNLIGEHTDYQGGFVLPLALERGTVVYGVGRLVDSDE TAEG DRGLCRVVSQT
Sbjct: 189 HGDGR-SVSVVEEGGIEERVPTAGELLVMARDLYDDTFGPPEDVRHVSAGYAPGRVNLIGEHTDYQGGFVLPLALERGTVVYGVGRLVDSDEATAEGSDRGLCRVVSQT 296
BLAST of mRNA_E-fasciculatus_F_contig13705.2742.1 vs. uniprot
Match: A0A836CBL4_9STRA (Galactokinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL4_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 3.170e-21 Identity = 53/92 (57.61%), Postives = 58/92 (63.04%), Query Frame = 1
Query: 46 VEERVPTAGELLVMARDLYDETFGPPEDVRHVCAGYAPGRVNLIGEHTDYQGGFVLPLALERGTVVYGVGRLVDSDEPTAEGGDRGLCRVVS 321
V +R T ELL ARD + FG P D +H A +APGRVNLIGEHTDY GGFVLP ALERGTVV GRLV +D D G RV S
Sbjct: 46 VADRTRTREELLQAARDGFRAAFGAPPDPQHEYAAWAPGRVNLIGEHTDYNGGFVLPCALERGTVVLAAGRLVRADAA-----DAGRVRVAS 132
BLAST of mRNA_E-fasciculatus_F_contig13705.2742.1 vs. uniprot
Match: A0A7S0C6G9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C6G9_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.750e-15 Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 1
Query: 76 LLVMARDLYDETFGPPEDVRHVCAGYAPGRVNLIGEHTDYQGGFVLPLALERGTVVYGVGRLVDSDEPTAEGGDRGLCRVVS 321
L+ A+ LY +TFG H+ APGRVNLIGEH DY GGFVLP+A+ T+ YG G +V+S + + +CR VS
Sbjct: 67 LIEQAKSLYRKTFGESSHGEHIICTAAPGRVNLIGEHVDYTGGFVLPMAIGFHTICYGFGSMVESKKNSC------VCRFVS 142
BLAST of mRNA_E-fasciculatus_F_contig13705.2742.1 vs. uniprot
Match: A0A7S2E1C8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E1C8_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 7.970e-14 Identity = 42/82 (51.22%), Postives = 51/82 (62.20%), Query Frame = 1
Query: 76 LLVMARDLYDETFGPPEDVRHVCAGYAPGRVNLIGEHTDYQGGFVLPLALERGTVVYGVGRLVDSDEPTAEGGDRGLCRVVS 321
LL A+ + FG + A APGRVNLIGEHTDY GGFVLPLALE+ TVV G+G++V + E D LC +VS
Sbjct: 41 LLGKAKSTFLAAFGEEPTI----AAQAPGRVNLIGEHTDYTGGFVLPLALEKRTVVVGIGKIVPASE------DDSLCSIVS 112
BLAST of mRNA_E-fasciculatus_F_contig13705.2742.1 vs. uniprot
Match: D7FSK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK4_ECTSI) HSP 1 Score: 73.6 bits (179), Expect = 5.280e-13 Identity = 42/83 (50.60%), Postives = 53/83 (63.86%), Query Frame = 1
Query: 73 ELLVMARDLYDETFGPPEDVRHVCAGYAPGRVNLIGEHTDYQGGFVLPLALERGTVVYGVGRLVDSDEPTAEGGDRGLCRVVS 321
EL A L++ +FGP + V +APGRVNLIGEHTDY GGFV+PLAL + TVV G G +V P + G G CR++S
Sbjct: 9 ELTNTATALFEASFGPSDGCAVV---FAPGRVNLIGEHTDYNGGFVMPLALGKKTVVVGRGSMV----PREKAGSAG-CRIIS 83
BLAST of mRNA_E-fasciculatus_F_contig13705.2742.1 vs. uniprot
Match: H3CAN5_TETNG (Galactokinase 1 n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3CAN5_TETNG) HSP 1 Score: 72.8 bits (177), Expect = 9.010e-13 Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 1
Query: 61 PTAGELLVMARDLYDETFGPPEDVRHVCAGYAPGRVNLIGEHTDYQGGFVLPLALERGTVVYG 249
PTA ELLV AR Y++T+G E+ + A APGRVNLIGEHTDY GFVLP+AL TV+ G
Sbjct: 8 PTAAELLVEARRAYEQTYG--EETPRLVAVCAPGRVNLIGEHTDYNQGFVLPMALPLVTVMVG 68
BLAST of mRNA_E-fasciculatus_F_contig13705.2742.1 vs. uniprot
Match: Q4TB90_TETNG ((spotted green pufferfish) hypothetical protein n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4TB90_TETNG) HSP 1 Score: 72.8 bits (177), Expect = 1.030e-12 Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 1
Query: 61 PTAGELLVMARDLYDETFGPPEDVRHVCAGYAPGRVNLIGEHTDYQGGFVLPLALERGTVVYG 249
PTA ELLV AR Y++T+G E+ + A APGRVNLIGEHTDY GFVLP+AL TV+ G
Sbjct: 6 PTAAELLVEARRAYEQTYG--EETPRLVAVCAPGRVNLIGEHTDYNQGFVLPMALPLVTVMVG 66
BLAST of mRNA_E-fasciculatus_F_contig13705.2742.1 vs. uniprot
Match: UPI001B85D087 (galactokinase n=3 Tax=Passeridae TaxID=9158 RepID=UPI001B85D087) HSP 1 Score: 72.0 bits (175), Expect = 1.680e-12 Identity = 37/67 (55.22%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 49 EERVPTAGELLVMARDLYDETFGPPEDVRHVCAGYAPGRVNLIGEHTDYQGGFVLPLALERGTVVYG 249
E + P + LL AR Y+E FG V A +APGRVNLIGEHTDY GFVLP+AL+ GTV+ G
Sbjct: 3 EPQEPGSSSLLAAARRAYEEAFGGAA----VVAAWAPGRVNLIGEHTDYNDGFVLPMALQLGTVLVG 65
BLAST of mRNA_E-fasciculatus_F_contig13705.2742.1 vs. uniprot
Match: UPI000D52F4EF (galactokinase n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=UPI000D52F4EF) HSP 1 Score: 72.0 bits (175), Expect = 1.680e-12 Identity = 39/65 (60.00%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 55 RVPTAGELLVMARDLYDETFGPPEDVRHVCAGYAPGRVNLIGEHTDYQGGFVLPLALERGTVVYG 249
RVP ELL AR LY++ FG + AG APGRVNLIGEHTDY GFVLP+AL TVV G
Sbjct: 4 RVPDVSELLGSARRLYEQVFGEEP----LVAGCAPGRVNLIGEHTDYNHGFVLPMALPLVTVVVG 64
BLAST of mRNA_E-fasciculatus_F_contig13705.2742.1 vs. uniprot
Match: A0A6U4EBP3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EBP3_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.240e-12 Identity = 44/90 (48.89%), Postives = 54/90 (60.00%), Query Frame = 1
Query: 61 PTAGE-LLVMARDLYDETFGPPEDVRHVCAGYAPGRVNLIGEHTDYQGGFVLPLALERGTVVYGVGRLVDSDEPTAEGGDRG--LCRVVS 321
P A E LL A+ L+ T+ PE + +APGRVNLIGEHTDY GFV P+AL TV+ GVG +VD D + G LCR+VS
Sbjct: 6 PEAKEVLLTRAQALFRRTY--PELSADIAV-FAPGRVNLIGEHTDYTNGFVCPMALTAATVIVGVGDVVDEDAVGSAAAAEGDLLCRIVS 92 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13705.2742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13705.2742.1 >prot_E-fasciculatus_F_contig13705.2742.1 ID=prot_E-fasciculatus_F_contig13705.2742.1|Name=mRNA_E-fasciculatus_F_contig13705.2742.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=109bp HGDDLGSLSVVGEGGVEERVPTAGELLVMARDLYDETFGPPEDVRHVCAGback to top mRNA from alignment at E-fasciculatus_F_contig13705:713..2672+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13705.2742.1 ID=mRNA_E-fasciculatus_F_contig13705.2742.1|Name=mRNA_E-fasciculatus_F_contig13705.2742.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1960bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13705:713..2672+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13705:713..2672+ >mRNA_E-fasciculatus_F_contig13705.2742.1 ID=mRNA_E-fasciculatus_F_contig13705.2742.1|Name=mRNA_E-fasciculatus_F_contig13705.2742.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=654bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13705:713..2672+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |