mRNA_E-fasciculatus_F_contig1370.2741.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1370.2741.1 vs. uniprot
Match: D8LBT3_ECTSI (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT3_ECTSI) HSP 1 Score: 275 bits (704), Expect = 4.010e-88 Identity = 144/184 (78.26%), Postives = 147/184 (79.89%), Query Frame = 1
Query: 58 MRGQARLSALLSRVKPLFVPSTTKAGRWVHTEAVDGFGGNNASFYETTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVQIVEGAGEAIPIPDSSARALVAAQSFHWMSSVVTLREVHRVLVPGGLFALVWNTRDCTRPWVR 609
MRGQARLSALLSRV+P FVP +TKAGRWVHTEAV GFGGNNASFYE TRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTR ILPFALSEG AGEAIPIPDSSARALVA QSFHWMSS TLREVHRVLVPGGLF L+WNTRDCTRPWVR
Sbjct: 1 MRGQARLSALLSRVRPPFVPPSTKAGRWVHTEAVGGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTRNILPFALSEG----------------------------AGEAIPIPDSSARALVAPQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVR 156
BLAST of mRNA_E-fasciculatus_F_contig1370.2741.1 vs. uniprot
Match: A0A7V7E654_9PROT (Class I SAM-dependent methyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7V7E654_9PROT) HSP 1 Score: 174 bits (442), Expect = 1.040e-47 Identity = 120/285 (42.11%), Postives = 151/285 (52.98%), Query Frame = 1
Query: 142 VHTEAVDGFGGNNASFYETTRPGYPAHALRAIEAE-IRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVQIVEGAGEAIPIPDSSARALVAAQSFHWMSSVVTLREVHRVLVPGGLFALVWNTRDCTRPWVRALEDIIDPFYGDDVPRQHGGSWRQSFRDLEQSRLDKRPANGQKYRSFFGGLTEQHFKHSELLTLEE-LEGRMRSISVIATRPEPERADASLRAQRLVETHPDTRDGLRLSGRVELF--YDTEVYWCNK 984
VH A GF A Y RP YPA A++ I + GL+ SG +VDLGAGTGKFTR +L + G + VEPV AMR QF PG +++G EAIP+PD SA ALV AQSFHW +++V L E+ RVL PGG+ LVWN RD T WV ++ II PF G PR H G WRQ F PA G FG L + F H +E+ L R+ S+S IA PE + + THPD L+G+ E+ Y TE + C +
Sbjct: 4 VHEAASVGFS-IQAEAYRRGRPDYPA----AVDGWLIGQLGLS-SGRSVVDLGAGTGKFTRRLL----ATGARVTAVEPVAAMRAQFVLTAPGTLVLDGTAEAIPLPDGSADALVCAQSFHWFANLVALSEIRRVLKPGGVLGLVWNVRDETVDWVASVGRIIQPFEGS-TPRYHKGDWRQLF-----------PAEG------FGQLEQTVFPHGHQGAVEQVLIDRILSVSFIAALPESMHNLVAAELRHFAATHPD------LAGQKEIIFPYRTEAFCCRR 254
BLAST of mRNA_E-fasciculatus_F_contig1370.2741.1 vs. uniprot
Match: A0A2S5KHR5_9PROT (SAM-dependent methyltransferase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2S5KHR5_9PROT) HSP 1 Score: 174 bits (442), Expect = 1.200e-47 Identity = 115/282 (40.78%), Postives = 154/282 (54.61%), Query Frame = 1
Query: 142 VHTEAVDGFGGNNASFYETTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVQIVEGAGEAIPIPDSSARALVAAQSFHWMSSVVTLREVHRVLVPGGLFALVWNTRDCTRPWVRALEDIIDPFYGDDVPRQHGGSWRQSFRDLEQSRLDKRPANGQKYRSFFGGLTEQHFKHSELLTLEE-LEGRMRSISVIATRPEPERADASLRAQRLVETHPDTRDGLRLSGRVELFYDTEVYWCNK 984
VH A G+ +A+ Y RP YPA + A + GL G +VDLGAGTGKFTR ++ + G ++ VEPV AMR + + A+P VQ +EG AIP+PD+S LV AQSFHW ++ TL EV RVL PGG FAL+WN RD WV A+ +II P+ GD PR + G WRQ QS L ++ F L +Q + H+ L + EE + R S+S IA P+ E+ + L+ +P RD L+ Y+TE YWC K
Sbjct: 4 VHDAAQSGYSQASAT-YRRGRPEYPAEVDSWLTATL---GL-GPSATVVDLGAGTGKFTRRLV----ATGAEVIAVEPVAAMRAELQQALPQVQALEGNAAAIPLPDASVDVLVCAQSFHWFATEATLAEVARVLKPGGRFALIWNVRDERVDWVAAITEIITPYEGD-APRFYKGDWRQPL----QSAL---------FQQTFTPLQQQLWPHAHLGSSEEVIIARSLSVSFIAALPQTEQDKVEAALRGLISRYPQLRDQQELA----FPYNTEAYWCQK 258
BLAST of mRNA_E-fasciculatus_F_contig1370.2741.1 vs. uniprot
Match: A0A7U9Q2G0_PSEFL (Methyltransf_11 domain-containing protein n=23 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A7U9Q2G0_PSEFL) HSP 1 Score: 171 bits (434), Expect = 1.620e-46 Identity = 109/282 (38.65%), Postives = 150/282 (53.19%), Query Frame = 1
Query: 142 VHTEAVDGFGGNNASFYETTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVQIVEGAGEAIPIPDSSARALVAAQSFHWMSSVVTLREVHRVLVPGGLFALVWNTRDCTRPWVRALEDIIDPFYGDDVPRQHGGSWRQSFRDLEQSRLDKRPANGQKYRSFFGGLTEQHFKHSELLTLEE-LEGRMRSISVIATRPEPERADASLRAQRLVETHPDTRDGLRLSGRVELFYDTEVYWCNK 984
+H A DG+ A Y RP YP A+E +R + G G ++VDLGAGTGKFT +L + G ++ VEPV+ MR + AA P Q++EG+ EA+P+ D+S LV AQ+FHW + L E+HRVL PGG ALVWN RD PWV L+ I++ D PR + G+WRQ+F P G FG L EQHF T E+ + R+RS S IA P+ ER + L+++ P LR +V + Y T ++C +
Sbjct: 6 IHHAAADGYQ-QAADTYVRGRPDYPP----ALEPWLRETLGLGPGRVVVDLGAGTGKFTGRLL----ATGAQVIAVEPVEQMRARLAAAQPEAQVLEGSAEALPLKDASVDVLVCAQAFHWFAHRAALEEIHRVLKPGGKLALVWNLRDARVPWVARLDAIVNALQAD-TPRYYTGAWRQAF-----------PHPG------FGPLQEQHFTQGHSGTPEDVIFNRVRSTSFIAALPQAEREAVDRQIVALIDSEPQ----LRGKAQVTVPYTTAAFYCTR 256
BLAST of mRNA_E-fasciculatus_F_contig1370.2741.1 vs. uniprot
Match: A0A3G8GE75_9BURK (Class I SAM-dependent methyltransferase n=7 Tax=Burkholderiales TaxID=80840 RepID=A0A3G8GE75_9BURK) HSP 1 Score: 170 bits (430), Expect = 6.760e-46 Identity = 110/283 (38.87%), Postives = 152/283 (53.71%), Query Frame = 1
Query: 142 VHTEAVDGFGGNNASFYETTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVQIVEGAGEAIPIPDSSARALVAAQSFHWMSSVVTLREVHRVLVPGGLFALVWNTRDCTRPWVRALEDIIDPFYGDDVPRQHGGSWRQSFRDLEQSRLDKRPANGQKYRSFFGGLTEQHFKHSELLTLEE-LEGRMRSISVIATRPEPERADASLRAQRLVETHPDTRDGLRLSGRVELFYDTEVYWCNKT 987
+H A DG+ A Y RP YP I +R + +G ++DLGAGTGKFT P L+ G S++ VEPV AM D+ AA PGV+ + G +AIP+PD+S +V AQ+FHW ++ L E+HRVL PGG LVWN RD PWV A++ I++ F GD PR + G+WRQ+F P G FG + E+H+ + + E+ + R+RS S I+ P +RA R Q L++ P+ LR V L YDT Y +T
Sbjct: 7 IHHSAADGYT-KGADTYVRGRPDYPPE----IAWWLRDTLGLHAGATVLDLGAGTGKFT----PRLLATGASVIAVEPVAAMLDKLAAAHPGVRPLVGTADAIPLPDASVDVVVCAQAFHWFATAEALDEIHRVLKPGGRLGLVWNMRDANVPWVAAIDRIVNEFEGD-APRYYTGAWRQAF-----------PHPG------FGPMDERHYANGHTGSPEDVILNRVRSTSFISALPPEQRAGVDQRLQALIQAEPE----LRGHAAVTLPYDTAAYCLART 258
BLAST of mRNA_E-fasciculatus_F_contig1370.2741.1 vs. uniprot
Match: UPI000469508D (class I SAM-dependent methyltransferase n=1 Tax=Pseudomonas sp. PH1b TaxID=1397282 RepID=UPI000469508D) HSP 1 Score: 168 bits (425), Expect = 3.330e-45 Identity = 111/284 (39.08%), Postives = 150/284 (52.82%), Query Frame = 1
Query: 142 VHTEAVDGFGGNNASFYETTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVQIVEGAGEAIPIPDSSARALVAAQSFHWMSSVVTLREVHRVLVPGGLFALVWNTRDCTRPWVRALEDIIDPFYGDDVPRQHGGSWRQSFRDLEQSRLDKRPANGQKYRSFFGGLTEQHFKHSELLTLEE-LEGRMRSISVIATRPEPERADASLRAQRLVETHPDTRDGLRLSGRVELF--YDTEVYWCNK 984
+H A DG+ A Y RP YP+ A++ +R + G ++VDLGAGTGKFT +L + G ++ VEPV MR + AA+P Q ++G+ EAIP+ D+S LV AQ+FHW +S L E+HRVL PGG ALVWN RD PWV L+ I++ GD PR + G+WRQ F P G FG L EQHF ++E + R+RS S IA PE ER + L+++ P R GR E+ Y+T + C K
Sbjct: 6 IHHAAADGYQ-QAADTYVRGRPDYPS----ALDPWLRETLGLEPGRVVVDLGAGTGKFTGRLL----ATGAQVIAVEPVAEMRARLAAALPLAQALDGSAEAIPLRDASVDVLVCAQAFHWFASNAALDEIHRVLKPGGKLALVWNLRDARVPWVARLDGIVNALQGD-TPRYYTGAWRQVF-----------PHPG------FGPLQEQHFSQGHSGSVENVIFNRVRSTSFIAALPEAERQAVDRQIAALIDSEPQLR------GRAEVTVPYETAAFHCVK 256
BLAST of mRNA_E-fasciculatus_F_contig1370.2741.1 vs. uniprot
Match: A0A126S4J6_PSEPU (Methyltransferase n=17 Tax=Pseudomonas TaxID=286 RepID=A0A126S4J6_PSEPU) HSP 1 Score: 167 bits (422), Expect = 8.600e-45 Identity = 108/281 (38.43%), Postives = 145/281 (51.60%), Query Frame = 1
Query: 142 VHTEAVDGFGGNNASFYETTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVQIVEGAGEAIPIPDSSARALVAAQSFHWMSSVVTLREVHRVLVPGGLFALVWNTRDCTRPWVRALEDIIDPFYGDDVPRQHGGSWRQSFRDLEQSRLDKRPANGQKYRSFFGGLTEQHFKHSELLTLEELEGRMRSISVIATRPEPERADASLRAQRLVETHPDTRDGLRLSGRVELFYDTEVYWCNK 984
VHT A GF +S YE RP YP A++ +R + +G ++DLGAGTGKFTR + A L VEPV AMR++F +P V ++EG + IP+ D+S + LV AQ+FHW + LRE+HRVL PGG L+WN RD T WV + +II P+ GD PR H G WR +F S L H + + + LE R+RS+S IA P+ E+ R Q LV+ HP L+ RV Y T+ Y C +
Sbjct: 4 VHTSASTGFS-RQSSNYEQGRPDYPV----ALQGWLRDTLGIDAGTPVLDLGAGTGKFTRLLTALAPR----LTAVEPVAAMRERFHERLPEVPVLEGTAQHIPLADASQQVLVCAQAFHWFADAAALREMHRVLAPGGRLGLIWNVRDETVDWVARITEIITPYEGD-TPRFHTGRWRDAFAGSRFSAPQ------------LTTLPHVHEGNPQTVILE----RLRSVSFIAALPQAEQDRVMARLQDLVDNHP----ALKGRERVAFPYQTQAYVCQR 254
BLAST of mRNA_E-fasciculatus_F_contig1370.2741.1 vs. uniprot
Match: UPI001B32B7EE (methyltransferase domain-containing protein n=1 Tax=Pseudomonas sp. Tri1 TaxID=2823875 RepID=UPI001B32B7EE) HSP 1 Score: 166 bits (421), Expect = 1.200e-44 Identity = 106/273 (38.83%), Postives = 146/273 (53.48%), Query Frame = 1
Query: 175 NNASFYETTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVQIVEGAGEAIPIPDSSARALVAAQSFHWMSSVVTLREVHRVLVPGGLFALVWNTRDCTRPWVRALEDIIDPFYGDDVPRQHGGSWRQSFRDLEQSRLDKRPANGQKYRSFFGGLTEQHFKHSELLTLEE-LEGRMRSISVIATRPEPERADASLRAQRLVETHPDTRDGLRLSGR--VELFYDTEVYWCNK 984
+ A+ Y RP YPA + E+ G+ G ++DLGAGTGKFTR + S G+ +V VEPV+AMR +F ++P V IVEG E IP +A+ALV AQ+FHW ++ L E+HRVL P G L+WN RD T WV A+ DII P+ GD PR H G+WR F ++F F+++ T +E + R S+S IA P ERA + + Q+L++THP R GR +E Y T+ Y C +
Sbjct: 14 SQANTYAAGRPSYPAELSTWLTKEL---GVL-PGSAVIDLGAGTGKFTRLLK----SMGIDVVAVEPVEAMRTEFAKSLPDVGIVEGTAECIPFGSGTAQALVCAQAFHWFANEKALAEIHRVLRPNGRLGLIWNVRDETVDWVAAITDIITPYEGD-APRFHTGAWRSPFTG-----------------NYFSAPELTCFQYTHSGTAKEVIIDRFLSVSFIAALPPAERAKVTEQLQQLIDTHPSLR------GREIIEFPYQTQAYACRR 254
BLAST of mRNA_E-fasciculatus_F_contig1370.2741.1 vs. uniprot
Match: Q1I8Z5_PSEE4 (Methyltransf_11 domain-containing protein n=4 Tax=Pseudomonas entomophila TaxID=312306 RepID=Q1I8Z5_PSEE4) HSP 1 Score: 166 bits (419), Expect = 2.350e-44 Identity = 105/281 (37.37%), Postives = 147/281 (52.31%), Query Frame = 1
Query: 142 VHTEAVDGFGGNNASFYETTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVQIVEGAGEAIPIPDSSARALVAAQSFHWMSSVVTLREVHRVLVPGGLFALVWNTRDCTRPWVRALEDIIDPFYGDDVPRQHGGSWRQSFRDLEQSRLDKRPANGQKYRSFFGGLTEQHFKHSELLTLEELEGRMRSISVIATRPEPERADASLRAQRLVETHPDTRDGLRLSGRVELFYDTEVYWCNK 984
VH A GF + + YE RP YP A++ +R + G+G ++DLGAGTGKFTR + P A L VEPV AMR++F +P V ++EG + +P+ D+S + LV AQ+FHW + L E+HRVL PGG LVWN RD + WV + +II P+ GD PR H G WR++F R P L H + + +E R+RS+S IA P+ E+ R Q L++ HPD L+ R+ Y T+ Y C +
Sbjct: 4 VHASASTGFTRQSGN-YEQGRPDYPI----ALQGWLRDTLGVGNGTTVLDLGAGTGKFTRLLTPLAPR----LTAVEPVAAMRERFHEQLPEVPVLEGTAQHMPVADASQQVLVCAQAFHWFADAAALAEMHRVLAPGGRLGLVWNVRDESVDWVARITEIITPYEGD-TPRFHTGRWREAF----DGRWFSAPT--------LTTLPHVHEGSPQTVIIE----RLRSVSFIAALPQVEQDKVMARLQDLIDHHPD----LKGRERIAFPYQTQAYRCQR 254
BLAST of mRNA_E-fasciculatus_F_contig1370.2741.1 vs. uniprot
Match: A0A3P4AWJ1_9BURK (Putative methyltransferase YcgJ n=1 Tax=Pigmentiphaga humi TaxID=2478468 RepID=A0A3P4AWJ1_9BURK) HSP 1 Score: 166 bits (419), Expect = 2.560e-44 Identity = 109/280 (38.93%), Postives = 150/280 (53.57%), Query Frame = 1
Query: 142 VHTEAVDGFGGNNASFYETTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVGVEPVKAMRDQFEAAVPGVQIVEGAGEAIPIPDSSARALVAAQSFHWMSSVVTLREVHRVLVPGGLFALVWNTRDCTRPWVRALEDIIDPFYGDDVPRQHGGSWRQSFRDLEQSRLDKRPANGQKYRSFFGGLTEQHFKHSELLTLEE-LEGRMRSISVIATRPEPERADASLRAQRLVETHPDTRDGLRLSGRVELF--YDTEVY 972
+H A DG+ A Y RP YP I+ +R + +G +VDLGAGTGKFT P + G +++ VEPV +M D+ AA+PGV+ + G EAIP+PD+SA A+V AQ+FHW + L E+HRVL PGG ALVWN RD PWV L+ I++ Y +D PR + G+WR +F P G FG L E+H+ + E + R+RS S IA PE ER + + L++ P+ L GR E+ YDT +
Sbjct: 7 IHHAAADGYT-QQADAYVRGRPDYPTQ----IDGWLRDAVGLRAGTTVVDLGAGTGKFT----PRLAATGATVIAVEPVPSMLDKLTAALPGVRALTGTAEAIPLPDASADAVVCAQAFHWFAHAAALDEIHRVLKPGGRLALVWNMRDARVPWVARLDAIVNA-YENDAPRFYTGAWRAAF-----------PHAG------FGPLDERHYPNRHAGPPEHVILDRVRSTSFIAALPERERTQVDTQLRALIDAEPE------LHGRPEVAVPYDTAAF 253 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1370.2741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1370.2741.1 >prot_E-fasciculatus_F_contig1370.2741.1 ID=prot_E-fasciculatus_F_contig1370.2741.1|Name=mRNA_E-fasciculatus_F_contig1370.2741.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=315bp MRGQARLSALLSRVKPLFVPSTTKAGRWVHTEAVDGFGGNNASFYETTRPback to top mRNA from alignment at E-fasciculatus_F_contig1370:7583..12917+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1370.2741.1 ID=mRNA_E-fasciculatus_F_contig1370.2741.1|Name=mRNA_E-fasciculatus_F_contig1370.2741.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5335bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1370:7583..12917+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1370:7583..12917+ >mRNA_E-fasciculatus_F_contig1370.2741.1 ID=mRNA_E-fasciculatus_F_contig1370.2741.1|Name=mRNA_E-fasciculatus_F_contig1370.2741.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1890bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1370:7583..12917+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |