mRNA_E-fasciculatus_F_contig1370.2740.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1370.2740.1
Unique NamemRNA_E-fasciculatus_F_contig1370.2740.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1370.2740.1 vs. uniprot
Match: D8LBT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT4_ECTSI)

HSP 1 Score: 470 bits (1209), Expect = 2.320e-159
Identity = 270/325 (83.08%), Postives = 287/325 (88.31%), Query Frame = 1 
Query:    1 MKPQRTGRRREGASAGQRNGGXXXXXXXXXXXXXXXXXXXXXXLVAASA--SRRKAPA--LKRARLGASTATGLVGFKENVFVSDFFDRLGFFPLANQKSVRRAITEVLFKPAQEQLALRGEDESMEGVFSGVLAIHKFGSNTQESKAFSCMLWCTIALGAMTSNLRVDTVRRYIKLAEEAIDGLCTEDVPTAKAYTIMAMVYAWQDNSKLFAEYLQHAQGLVDRMDSSEEIPMELTDIMKELERVRVLHYTEDEDVIHECCNMPDGEPPTMTLAMMSDTGLFHMVRYYTNGVFKAFWRDLHERNSDLPETTRFAEKHRHECLYI 963
            MKPQRT +R+EGASA QRNGGXXXXXXXXXXXXXXXXXXXXXX        SRRKAP+  +KRAR G S ATGLVGFKENV+VSDFFDRLGFFPLANQK+VRRAITEVLF+PA+EQ +LRG  ESMEGVFSG LAIHKFGSNTQESKAFSCMLWCTIALGAMT+NL+V TVRRYIKLAEEA+DGLCTEDVPTAKAYTIMAMVYAWQDNS LFAEYL  AQ LVD +D+SEEIPMELTDIMKELERVRVLHYTEDEDVIH+CC   DGEPPTMTLAM+SD GLFHMVRYYTNGVFKAFWRDLHE NSDLP TTR   K+    LYI
Sbjct:    1 MKPQRTAKRKEGASAAQRNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRKAPSAVMKRARFGPSAATGLVGFKENVYVSDFFDRLGFFPLANQKTVRRAITEVLFRPAEEQGSLRGGAESMEGVFSGALAIHKFGSNTQESKAFSCMLWCTIALGAMTNNLKVATVRRYIKLAEEAVDGLCTEDVPTAKAYTIMAMVYAWQDNSALFAEYLGRAQKLVDSLDASEEIPMELTDIMKELERVRVLHYTEDEDVIHKCCYEADGEPPTMTLAMLSDAGLFHMVRYYTNGVFKAFWRDLHEVNSDLPATTREGLKNSAGALYI 325
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1370.2740.1 vs. uniprot
Match: A0A6H5KY55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY55_9PHAE)

HSP 1 Score: 439 bits (1129), Expect = 2.610e-144
Identity = 238/330 (72.12%), Postives = 268/330 (81.21%), Query Frame = 1 
Query:    1 MKPQRTGRRREGASAGQRNGGXXXXXXXXXXXXXXXXXXXXXXLVAASASRRKAPA--LKRARLGASTATGLVGFKENVFVSDFFDRLGFFPLANQKSVRRAITEVLFKPAQEQLALRGEDESMEGVFSGVLAIHKFGSNTQESKAFSCMLWCTIALGAMTSNLRVDTVRRYIKLAEEAIDGLCTEDVPTAKAYTIMAMVYAWQDNSKLFAEYLQHAQGLVDRMDSSEEIPMELTDIMKELERVRVLHYTEDEDVIHECCNMPDGEPPTMTLAMMSDTGLFHMVRYYTNGVFKAFWRDLHERNSDLPETTRFAEKHRHECLYIEEIANSR 984
            MKP+RT +R+ GASAG                    XXXXXXX        RKAP+  +KRAR+G S ATGLVG++ENVFV DFFDRLGFFPLA+Q++VRRA+TEV+ +PA+EQ + RG  ES EGVF+G  AI KFGSNTQESKA SC++WCTIALGAMT+NL + TVRRY+KLAEEAIDGLCTEDVPTAKAYTIM+MVYAWQDN  LFA+YL  AQ LVD MD+SEEIPM  +DIMKELERVRVLHYTEDEDVI++CC   DGEPPTMTLAMMSD GLFHMVRYYTNGVFKAFWRDLH+ NSDLPETTRFA+KHRHEC  IEEIANSR
Sbjct:  134 MKPRRTAKRKGGASAGX-------------------XXXXXXXXXXXXXXXRKAPSAVMKRARMGPSAATGLVGYEENVFVGDFFDRLGFFPLADQQTVRRALTEVVLRPAEEQSSFRGGAESDEGVFTGAPAIRKFGSNTQESKALSCIMWCTIALGAMTNNLSLLTVRRYVKLAEEAIDGLCTEDVPTAKAYTIMSMVYAWQDNVALFAKYLGRAQELVDSMDASEEIPM-ASDIMKELERVRVLHYTEDEDVINKCCYEADGEPPTMTLAMMSDAGLFHMVRYYTNGVFKAFWRDLHKSNSDLPETTRFADKHRHECSAIEEIANSR 443
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1370.2740.1 vs. uniprot
Match: A0A6H5K8L6_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8L6_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 5.370e-21
Identity = 68/199 (34.17%), Postives = 102/199 (51.26%), Query Frame = 1 
Query:  172 KRARLGASTATGLVGFKENVFVSDFFDRLGFFPLANQKSVRRAITEV-LFKPAQEQLALR-------GEDESMEGVFSGVLAIHKFGSNTQESKAFSCMLWCTIALGAMTSNLRVDTVRRYIKLAEEAIDGLCTE--DVPTAKAYTIMAMVYAWQDNSKLFAEYLQHAQGLVDRMDSSEEIPMELTDIMKELERVRVLH 738
            KRARL AS ATGLVG KEN  +S FF   GFFPL ++  VR AI EV L +P + +   +       G  E  +G                   A +C LWC +A+GA+      + V  Y+ LA  ++   C +   V TA+A+ +MA +Y +  N K+F  YL+ A+G+++R+  +     EL D++   +  R+ H
Sbjct:   98 KRARLSASPATGLVGMKENELLSSFFICFGFFPLTHESLVRGAIMEVVLVRPVEAEDVAQTRPAGAWGNSEPRQGT----------------DAASTCTLWCAVAIGALVQGQPTERVTDYLILARTSVSH-CFDMVTVETARAFMMMAYLYNFLRNEKMFQRYLEFARGVMERLQDTTSQTQELYDLLARGDDTRIFH 279
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1370.2740.1 vs. uniprot
Match: D8LU27_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU27_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 2.910e-19
Identity = 60/160 (37.50%), Postives = 85/160 (53.12%), Query Frame = 1 
Query:  169 LKRARLGASTATGLVGFKENVFVSDFFDRLGFFPLANQKSVRRAITEVL-FKPAQEQLALRGEDESMEGVFSGVLAIHKFGSNTQESKAFS-CMLWCTIALGAMTSNLRVDTVRRYIKLAEEAIDGLCTE-DVPTAKAYTIMAMVYAWQDNSKLFAEYLQ 639
            LKR RL AS ATGLVG +EN F+SDFF  +GF PL  +  VR A+  ++    AQ QL  R  D   +G F  + +     +  Q S   S C  WC + +GA+      ++V  Y +LA  A+D      D   AKA+ I+A +Y +  ++  F EYL+
Sbjct:   93 LKRCRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTRSHVRGAMVRMMAHSAAQHQLRAR-HDTPDQGQFGAIFSEDGITTGNQLSTGPSACTFWCAVGVGALVKGRPAESVTIYSRLARGALDAYTGPVDAEVAKAWAILAYLYGYMGDTAKFEEYLE 251
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1370.2740.1 vs. uniprot
Match: A0A6H5J7P2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P2_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 4.820e-19
Identity = 59/191 (30.89%), Postives = 100/191 (52.36%), Query Frame = 1 
Query:  175 RARLGASTATGLVGFKENVFVSDFFDRLGFFPLANQKSVRRAITEVLFKPAQEQLALRGEDESMEGVFSGVLAIHKFG-------------SNTQESKAFSCMLWCTIALGAMTSNLRVDTVRRYIKLAEEAIDGLCTED--VPTAKAYTIMAMVYAWQDNSKLFAEYLQHAQGLVDRMDSSEEIPMELTD 702
            RARL  S ATGL+G KEN ++ DFF  +GF P+ ++  +R+A+   +F+  QE+       E+  GVF G     +                N  E+ A +C+LW T+ +G +       +V  Y++LA EA+  +C +D    TA+A+T MA+   +  N   F +Y+  A+ +++ +   E++P +L D
Sbjct:   20 RARLSPSPATGLIGLKENAYIGDFFQTMGFLPITSESFIRKAMVNTMFRTMQERDPEFAGPEAG-GVFGGGQGWGEHALVPGGGGGGLARAENAIENAAAACVLWSTVGVGCLIRGRPKSSVEGYVRLAREAL-SVCFDDGTAETARAFTAMALFQDFMGNEDKFIKYIDFAKSIINALPQ-EKVPADLLD 207
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1370.2740.1 vs. uniprot
Match: D7FTC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC3_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 7.510e-19
Identity = 61/199 (30.65%), Postives = 102/199 (51.26%), Query Frame = 1 
Query:  169 LKRARLGASTATGLVGFKENVFVSDFFDRLGFFPLANQKSVRRAITEVLFKPAQEQLALRGEDESMEGVFSG--VLAIHKFGSNTQ-----------------ESKAFSCMLWCTIALGAMTSNLRVDTVRRYIKLAEEAIDGLCTED--VPTAKAYTIMAMVYAWQDNSKLFAEYLQHAQGLVDRMDSSEEIPMELTD 702
            LKRARL  S ATGL+G KEN ++ DFF  +GF P+ ++  +R+A+   +F+  QE+      D    G  +G  V   H +G +                   E+ A +C+LW T+ +G +       +V  Y+ LA EA+  +C +D    TA+A+T MA+   +  N   F +Y+  A+ +++ +   E++P +L D
Sbjct:   30 LKRARLSPSPATGLIGLKENAYIGDFFQTMGFLPITSESFIRKAMVSTMFRTMQER------DPEFPGPEAGGVVGGGHGWGESALVPGXXXXXXLVRAESAVENAAAACVLWSTVGVGCLIRGRPKSSVEGYVHLAREAL-SVCFDDGTAETARAFTAMALFQDFMGNEDKFIKYIDFAKSIINALPP-EKVPADLLD 220
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1370.2740.1 vs. uniprot
Match: A0A6H5JUG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG6_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 6.390e-18
Identity = 61/205 (29.76%), Postives = 108/205 (52.68%), Query Frame = 1 
Query:  166 ALKRARLGASTATGLVGFKENVFVSDFFDRLGFFPLANQKSVRRAITEVLFKPAQEQLALRGEDESMEGVFSGVLAIHKFGSNTQESKAF--SCMLWCTIALGAMTSNLRVDTVRRYIKLAEEAIDGLC-TEDVPTAKAYTIMAMVYAWQDNSKLFAEYLQHAQGLVD---RMDSSEEIPMELTDIMKELERVRVLHYTEDEDVI 762
            A+KR RL AS ATGLVG +EN F++ FF  +GF PL  ++ VR  +  ++    ++Q ++  ED  +E   S  L +     NT E   F  +C  WC +A+GA+     +++   Y + A+EA+       +   AKA+TI+A ++ +  + + F EYL  +   V       S + +P+   +++K  E +++   T +E+ +
Sbjct:   45 AIKRFRLSASPATGLVGMQENSFLTSFFSSVGFLPLTTRRDVRETMVTLMMSATRQQ-SIATEDCDVEEN-SHALVLENKVCNTSEGDDFPKTCTFWCAVAIGALAKGHPIESTNIYFRRAKEAMARYSGPTNFEVAKAWTILAYLHGFIGDMETFHEYLALSDSFVHDSAERGSRDSLPVGFPEVVKHGETIKLFTGTAEEEEV 247
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1370.2740.1 vs. uniprot
Match: D8LU09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU09_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.870e-17
Identity = 59/172 (34.30%), Postives = 89/172 (51.74%), Query Frame = 1 
Query:  169 LKRARLGASTATGLVGFKENVFVSDFFDRLGFFPLANQKSVRRAITEVLFKPAQEQLALRGEDESMEGVFSGVLAIHKFGSNTQESKA-------FSCMLWCTIALGAMTSNLRVDTVRRYIKLAEEAIDGL--CTEDVPTAKAYTIMAMVYAWQDNSKLFAEYLQHAQGLV 657
            LKR RL AS ATGLVG +EN F+SDFF  +GF PL +   +R  + +++  PA  Q +  G      G F GV ++ +     + S+         +C  WC IALGA+     V++V +Y  LA EA+      + D   A A+ ++A VY +  +   F EYL  ++  +
Sbjct:    4 LKRFRLTASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVKIMASPAPLQQSAIG------GAFGGVGSMVRARCWNKASEKPQLPMDPSTCTFWCAIALGALAKGCPVESVAKYRHLAHEALTKSYPSSADAEVATAWAMLAYVYGFMGDLAKFQEYLALSESFL 169
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1370.2740.1 vs. uniprot
Match: A0A6H5L0W7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W7_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 2.400e-17
Identity = 68/201 (33.83%), Postives = 102/201 (50.75%), Query Frame = 1 
Query:  169 LKRARLGASTATGLVGFKENVFVSDFFDRLGFFPLANQKSVRRAITEVLFKPAQEQLALRGEDESMEGVFS---------GVLAIHKFGSNTQESKAFSCMLWCTIALGAMTSNLRVDTVRRYIKLAEEAI-DGLCTEDVPTAKAYTIMAMVYAWQDNSKLFAE---YLQHAQGLVDRMDSSEEIPMELTDIMKELERVRV 732
            LKR RL AS ATGLVG +EN F+  FF  LG  PL  + +VR A+ EV+ +    Q   R     MEG+           G LA      +T       CM+WC IALGA+   + V+ V  Y++LA E++ D      V  A+AY IM+ +++   +  +  +   YL  A  +V ++   E++P EL  ++    ++RV
Sbjct:  162 LKRCRLSASPATGLVGMQENGFLGAFFGCLGILPLTTESTVRNAMVEVMMRQCGGQAYSRTGGSGMEGLAEDEEKGWCGGGALARR----HTLPDHPAKCMMWCAIALGALMRGVPVERVTGYVQLARESLADCFDGRSVEHARAYLIMSFLHSIIHDKAIDDKNERYLSFAVNIVSKL-RPEDVPKELGLMLVTTNKLRV 357
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1370.2740.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 3.970e-17
Identity = 57/159 (35.85%), Postives = 81/159 (50.94%), Query Frame = 1 
Query:  169 LKRARLGASTATGLVGFKENVFVSDFFDRLGFFPLANQKSVRRAITEVLFKPAQEQLALRGEDESMEGVFSGVLAIHKFGSNTQ-ESKAFSCMLWCTIALGAMTSNLRVDTVRRYIKLAEEAIDGL--CTEDVPTAKAYTIMAMVYAWQDNSKLFAEYL 636
            LKR RL AS ATGLVG +EN F+SDFF  +GF PL +   +R  +  ++  PA  Q +  G   S  G        ++     Q    A +C  WC IALGA+     V++V +Y  LA EA+      + D   A A+ ++A +Y +  +   F EYL
Sbjct:  108 LKRFRLSASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVRIMASPAPLQQSAIGGACSEVGTMVRAPCWNEASERNQLPMDASTCTFWCAIALGALAKGSPVESVAKYRHLAHEALTKSYPSSTDAEVATAWAMLAYMYGFMGDLARFQEYL 266
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1370.2740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LBT4_ECTSI2.320e-15983.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KY55_9PHAE2.610e-14472.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8L6_9PHAE5.370e-2134.17Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU27_ECTSI2.910e-1937.50Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5J7P2_9PHAE4.820e-1930.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTC3_ECTSI7.510e-1930.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUG6_9PHAE6.390e-1829.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU09_ECTSI1.870e-1734.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0W7_9PHAE2.400e-1733.83Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JYW4_9PHAE3.970e-1735.85Zn(2)-C6 fungal-type domain-containing protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1370contigE-fasciculatus_F_contig1370:44..4341 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-27_002780.1
Exons7
Model size987
Cds size987
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927864.6216233-CDS-E-fasciculatus_F_contig1370:43..2291622927864.6216233-CDS-E-fasciculatus_F_contig1370:43..229Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1370 44..229 -
1695995729.2476873-CDS-E-fasciculatus_F_contig1370:43..2291695995729.2476873-CDS-E-fasciculatus_F_contig1370:43..229Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1370 44..229 -
1622927864.6397436-CDS-E-fasciculatus_F_contig1370:748..8591622927864.6397436-CDS-E-fasciculatus_F_contig1370:748..859Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1370 749..859 -
1695995729.257609-CDS-E-fasciculatus_F_contig1370:748..8591695995729.257609-CDS-E-fasciculatus_F_contig1370:748..859Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1370 749..859 -
1622927864.6587071-CDS-E-fasciculatus_F_contig1370:1439..15601622927864.6587071-CDS-E-fasciculatus_F_contig1370:1439..1560Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1370 1440..1560 -
1695995729.2682686-CDS-E-fasciculatus_F_contig1370:1439..15601695995729.2682686-CDS-E-fasciculatus_F_contig1370:1439..1560Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1370 1440..1560 -
1622927864.6755571-CDS-E-fasciculatus_F_contig1370:2148..22191622927864.6755571-CDS-E-fasciculatus_F_contig1370:2148..2219Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1370 2149..2219 -
1695995729.2789352-CDS-E-fasciculatus_F_contig1370:2148..22191695995729.2789352-CDS-E-fasciculatus_F_contig1370:2148..2219Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1370 2149..2219 -
1622927864.6891875-CDS-E-fasciculatus_F_contig1370:2749..29631622927864.6891875-CDS-E-fasciculatus_F_contig1370:2749..2963Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1370 2750..2963 -
1695995729.290395-CDS-E-fasciculatus_F_contig1370:2749..29631695995729.290395-CDS-E-fasciculatus_F_contig1370:2749..2963Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1370 2750..2963 -
1622927864.7196887-CDS-E-fasciculatus_F_contig1370:3441..35491622927864.7196887-CDS-E-fasciculatus_F_contig1370:3441..3549Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1370 3442..3549 -
1695995729.298812-CDS-E-fasciculatus_F_contig1370:3441..35491695995729.298812-CDS-E-fasciculatus_F_contig1370:3441..3549Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1370 3442..3549 -
1622927864.7353146-CDS-E-fasciculatus_F_contig1370:4165..43411622927864.7353146-CDS-E-fasciculatus_F_contig1370:4165..4341Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1370 4166..4341 -
1695995729.3071702-CDS-E-fasciculatus_F_contig1370:4165..43411695995729.3071702-CDS-E-fasciculatus_F_contig1370:4165..4341Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1370 4166..4341 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1370.2740.1prot_E-fasciculatus_F_contig1370.2740.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1370 44..4341 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1370.2740.1

>prot_E-fasciculatus_F_contig1370.2740.1 ID=prot_E-fasciculatus_F_contig1370.2740.1|Name=mRNA_E-fasciculatus_F_contig1370.2740.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=329bp
MKPQRTGRRREGASAGQRNGGGASGGQRNDGGAADGASRNSSALVAASAS
RRKAPALKRARLGASTATGLVGFKENVFVSDFFDRLGFFPLANQKSVRRA
ITEVLFKPAQEQLALRGEDESMEGVFSGVLAIHKFGSNTQESKAFSCMLW
CTIALGAMTSNLRVDTVRRYIKLAEEAIDGLCTEDVPTAKAYTIMAMVYA
WQDNSKLFAEYLQHAQGLVDRMDSSEEIPMELTDIMKELERVRVLHYTED
EDVIHECCNMPDGEPPTMTLAMMSDTGLFHMVRYYTNGVFKAFWRDLHER
NSDLPETTRFAEKHRHECLYIEEIANSR*
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mRNA from alignment at E-fasciculatus_F_contig1370:44..4341-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1370.2740.1 ID=mRNA_E-fasciculatus_F_contig1370.2740.1|Name=mRNA_E-fasciculatus_F_contig1370.2740.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4298bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1370:44..4341- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAAGCCACAGCGGACTGGAAGGCGGAGAGAAGGCGCCTCGGCTGGGCA
GCGGAATGGCGGCGGCGCCTCGGGTGGACAGCGGAACGACGGCGGCGCGG
CGGATGGGGCTTCCAGGAATTCTTCCGCTTTGGTTGCAGCCTCAGCTTCG
AGAAGGAAGGCGCCGGCGCTGAAACGGTGAGGTGTTGCTGGTTGAATCTT
TCTTTTTTCTATTTTCTTTTGGTCTCACGAAAACATGCATACCAGTGCAT
GTTGTTTGCGTCGATCGCGCCGACCGGCTGACCACCCGTGAAAAGACGGG
AGTCTTGACTTTGTGTGCGTGACGACTATTTCTATTTTCTCGGCATTTTA
GCGTCGACCACAGCGCTTGTTTTTCGAGAATACTGTACAATGTACACATG
TTTGTTGTTGGTGTTGGGTACTGCTGTTCGCATCCTTACGTGCGGCGGCG
GCGGCGGCGGCGACGGCGGCCGCAAAAAGCTGTGCGCGCCCAAAAGGTAG
GTGATGTGTCGGCAGGGTCTGCTCGCGGGTGAAGATTGTTGAGTTTTGGC
GACAACGGTCGTGCTTGCCGTCCACTGTTGAGTAAATAGGCTTGTGTTTG
TCTTGGTTTTGCCGAGGAAAGAGTGTTGTGAATCACAGCGGAATGTTTGG
TGGCTCCTTCCTGTACGAGTTGTGACGTTTGAAAGGCCATTCGTTTCGTG
TGTGCTACTGCTGCAGCTGACCATGATGAGAACCTCTTGCCGTTTTCATG
CGCACGTCTGCTGTCTTCTGTCGTCGCGCTATCTATACCTAGGGCGCGGT
TGGGCGCTTCGACGGCAACGGGGCTCGTGGGCTTCAAGGAGAACGTGTTC
GTCAGCGACTTCTTCGACCGGCTGGGCTTCTTCCCTCTGGCCAACCAGAA
GTGAGAGGGAGATACTGCTGTAGCAATGGGGGAAGGAAAGGGGAAACTGG
GGACTGTAAATATCAACACCTATCGAGGCATTGGCCACAAGTGTCAGCGG
AAACGGCGCACAGCAGTTGGGGGGTTGAAGGCGGCGTGGCATAGCATCGA
GTTGAGAATCCGAAAGTGGTAAAGGGTAAGGGCACAGGGTTCTGCACACT
CGTCGGGTGAATGATTTGCTCCGAACATAAAAGCCAAACTGCAGCAGCAG
CGGCGGACGCGATGGTCTACAGAGGAAGTGCCACTTTTTGAAACCCCTTC
ACAGAGTAGTCAAATGTCTAACCGTGTGTGTCTCACCCATGGGGCGTTGT
CCACAAGTATGCCATTTTTGTACTTGCGTGACAGTTAACGCTCCTCGAAG
AAAGAAAAGCACCGCCGCCTAATAAACAACACGATTCTCATCCACCAACG
ACGCGAAATTGATCAAAACACGCGACAGGTCGGTCCGGCGGGCTATCACG
GAGGTGCTGTTCAAGCCTGCCCAAGAGCAGCTAGCCCTCCGTGGGGAAGA
CGAGTCGATGGAAGGCGTGTTTTCGGGCGTTCTAGCGATCCACAAGTTTG
GGTCCAACACGCAGGAGAGCAAGGCTTTCTCGTGCATGCTGTGGTGCACG
ATCGCGTTGGGCGCCATGACCAGCAACCTTAGGGTCGACACGGTGAGTCC
CTTGGACGCAGTTCTCTTTGAGGTGTGCGTGTCCTGCTGCAGCGAAGTTG
TTTGTGTGTGTGTGTGTGTGTCGGGGGCGAAACGGCAGAGGGGAATTCTT
GTTTGCCCGGACGGCGTGTGTAAATGTATCCGATGGTAGTCTCGGTATCA
AGCTGAAGTGGACTCGAAAGCAACGCGGCACAGTCGGCATCAGTAGCCAG
TATCCTGTTCGCGTAGACGATTCAGCTGAAGGCGGGTGACCCCCCCCCCC
CCCCCCCACTCTCTCTCCTCAAGCAAGACGCGCACCAGCAGATCTGACTT
GGACACTGAACCAGCCGTGCGTGTACACCAACGTGGCGTACGTGTTGACC
AGCCTCAAGCCGAAAGAAACCCTCCTCCGAAAATAAAAAATGCGTTCATG
GGTGTGCAGCAGCAGCAGCAGTCGGTATTTTGCTCCACCCACCGGCATAC
ATACCCCGCAAAAGTTACCCCAACAGCAAGAGAGACGGCCACTTGTCGAT
TTGTTTCCGCGGTCCGCGACAGGTGAGGCGCTACATCAAGCTGGCGGAGG
AGGCGATAGACGGCTTGTGCACCGAGGACGTGCCCACTGCCAAGTGAGTC
AGTCCTTCGAGGCCGGGTCCGGTTTGAAGGTCTCCGCTGCATTCGGGCGC
GTCGTCATGACGGCTGTATAGCGTTTTGGCTCGTCGTGGTTCTGTTTCCT
ACCTGCGGGGGCTTAGAGAAGAAGGCAGTTCGACGCGTCGTTTATCTACC
GATGCTTGGTATCGATGCGCCTTCCGCGCCGGCGTGCTTTTCTACCATCT
TGTTCTTCGTTCCAGCTCTTGCGGCTTGTGGGGCGGCTGAGTCGGTCCCG
CCGTCCAAAATTTGCGCTGTCTTTTTGCAATTTAGTCTAGTTTTTGTTGC
AAGAGATCATGGCAGGAGAAGACAAGGCGAACGCCCATCACCGCATGGCG
GCCGCACCTGGCTGATGCATGTTGTGCCTGCTGTGTGGTACGTCGCCCGC
TCCTGCCACCTCCTGCCACCTCCTGCCACCCTTCCCCTGTTGCTATCTTT
GTGTAGGGACACTATTTGGCAACAACAACGGGCGTCGTCGAGTACGACGC
GCAGACGACCACGTACCAACGTCAAACTCGTATGCATACAATCGGTGTTT
TTGTTGTTGTTGTTTTCTCGACCTTTTTCAGGGCGTACACGATCATGGCC
ATGGTGTACGCGTGGCAGGACAACAGCAAGCTGTTTGCGGAATATCTCCA
ACACGCCCAGGGCTTGGTTGACCGTATGGACTCGTCAGAGGAAATCCCTA
TGGTGAGTGATAAATGTCTTTCGCACGCGGCGTACCAGCGCATCGCACTC
CGCCCCTCCTTCCCTTTAAGTGCTGATGTATTGCCAAGGAGTTGCAGTGT
TTTTTTTTCCCGTCAAGAAGCAATATTCATATGGCGGCGAAGAGCAAGGT
GGACCATGACGCTTAAGAGCAAATCGAGAGAAAGAGATAACTTCCGTGAA
ATCTCCAGAAGCTTCCCGAACCTCGTCGCGCGGAGATTCCCTCTCTGGTT
GATTTACCGCTCTCTCCGTTGATGCTATCTTGCACTACGACGGCCTCCAA
ATGAATTCTTGCCACATCAGAGGTTTGTTGCCGTGGCAATTAACTAACGT
TTCAACCACAACTGACGGTTGATTGCGTCATGCCCGGGAAAGAGACAGGA
GGGAGATAGTTTGGCATATACCCCAGGGAGTCATGGCACTCATGCTAACG
CCGTGAAGCACAGTTGCAACTCGGTCATTGAACCCCCCCGTGATAATGCT
TTGTTCACCGGGCCGGCAACTCGCTCATACCAACACATGTACCGCATGGC
GCGATGCGCGCATCAATGGGGTTGCACTGCAGGAGCTGACAGACATCATG
AAAGAGCTCGAGCGGGTGCGGGTGCTGCACTACACCGAAGACGAGGATGT
GATCCACGAGTGCTGCAACATGCCCGACGGCGAGCCTCCCACTGTAAGCA
AGGGGGGTGGAGAGCTGGGAACAGGGGGTTTATCCGGGGGGGGAAGGGTT
GGAATGAGGGCGAAGGGTTCTCTTCAAGACCACGGCTGCTTACCTCTTCT
GCTTGGACCACTCCACGGGTCGTTACCGTTGGATGCTCTGGATGAATCGG
CCGCCGTTATCTGTCTTCTGTAACCTCTTGTGACGCGTACAAGTGTGAGC
TTTTGTTTCTTCGAAACCCTGTCCGTCCGTGCCCCCAGTTTGTTGTACCC
TGGATAGTGCAGTGGTCAATTTATTGGTCAGGTTGCAGTCGCCTCTCTCG
TTGTATGCTTGTTTTTTTCGATAGTTGTCGAAAACAACATTGCCAACGAG
CGGGTCGTGAAAACCGCTCGTGTTTCGTCGCCCATCCCCACTAGAGCAGC
GCACAGCAGCAGCAGCTTCTCAGTACGTGCTGTATTGTACTACTGTCGTT
TTGTTGAATAACCACTAGCACACACACCTCGGAAATGCCATTTATGTACG
TGTGTGCGACAGATGACCCTCGCCATGATGAGCGACACCGGGCTTTTCCA
CATGGTTCGCTACTACACGAACGGCGTCTTCAAGGCGTTCTGGAGAGATC
TGCACGAACGCAACTCCGATCTGCCCGAGACGACGAGGTTCGCCGAGAAG
CACCGTCACGAGTGCCTCTACATCGAAGAGATCGCCAACTCGCGGTAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1370:44..4341-

>mRNA_E-fasciculatus_F_contig1370.2740.1 ID=mRNA_E-fasciculatus_F_contig1370.2740.1|Name=mRNA_E-fasciculatus_F_contig1370.2740.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1974bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1370:44..4341- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAAGCCACAGCGGACTGGAAGGCGGAGAGAAGGCGCCTCGGCTGGGCA
GCGGAATGGCGGCGGCGCCTCGGGTGGACAGCGGAACGACGGCGGCGCGG
CGGATGGGGCTTCCAGGAATTCTTCCGCTTTGGTTGCAGCCTCAGCTTCG
AGAAGGAAGGCGCCGGCGCTGAAACGATGAAGCCACAGCGGACTGGAAGG
CGGAGAGAAGGCGCCTCGGCTGGGCAGCGGAATGGCGGCGGCGCCTCGGG
TGGACAGCGGAACGACGGCGGCGCGGCGGATGGGGCTTCCAGGAATTCTT
CCGCTTTGGTTGCAGCCTCAGCTTCGAGAAGGAAGGCGCCGGCGCTGAAA
CGGGCGCGGTTGGGCGCTTCGACGGCAACGGGGCTCGTGGGCTTCAAGGA
GAACGTGTTCGTCAGCGACTTCTTCGACCGGCTGGGCTTCTTCCCTCTGG
CCAACCAGAAGGCGCGGTTGGGCGCTTCGACGGCAACGGGGCTCGTGGGC
TTCAAGGAGAACGTGTTCGTCAGCGACTTCTTCGACCGGCTGGGCTTCTT
CCCTCTGGCCAACCAGAAGTCGGTCCGGCGGGCTATCACGGAGGTGCTGT
TCAAGCCTGCCCAAGAGCAGCTAGCCCTCCGTGGGGAAGACGAGTCGATG
GAAGGCGTGTTTTCGGGCGTTCTAGCGATCCACAAGTTTGGGTCCAACAC
GCAGGAGAGCAAGGCTTTCTCGTGCATGCTGTGGTGCACGATCGCGTTGG
GCGCCATGACCAGCAACCTTAGGGTCGACACGGTCGGTCCGGCGGGCTAT
CACGGAGGTGCTGTTCAAGCCTGCCCAAGAGCAGCTAGCCCTCCGTGGGG
AAGACGAGTCGATGGAAGGCGTGTTTTCGGGCGTTCTAGCGATCCACAAG
TTTGGGTCCAACACGCAGGAGAGCAAGGCTTTCTCGTGCATGCTGTGGTG
CACGATCGCGTTGGGCGCCATGACCAGCAACCTTAGGGTCGACACGGTGA
GGCGCTACATCAAGCTGGCGGAGGAGGCGATAGACGGCTTGTGCACCGAG
GACGTGCCCACTGCCAAGTGAGGCGCTACATCAAGCTGGCGGAGGAGGCG
ATAGACGGCTTGTGCACCGAGGACGTGCCCACTGCCAAGGCGTACACGAT
CATGGCCATGGTGTACGCGTGGCAGGACAACAGCAAGCTGTTTGCGGAAT
ATCTCCAACACGCCCAGGGCTTGGTTGACCGTATGGACTCGTCAGAGGAA
ATCCCTATGGGCGTACACGATCATGGCCATGGTGTACGCGTGGCAGGACA
ACAGCAAGCTGTTTGCGGAATATCTCCAACACGCCCAGGGCTTGGTTGAC
CGTATGGACTCGTCAGAGGAAATCCCTATGGAGCTGACAGACATCATGAA
AGAGCTCGAGCGGGTGCGGGTGCTGCACTACACCGAAGACGAGGATGTGA
TCCACGAGTGCTGCAACATGCCCGACGGCGAGCCTCCCACTGAGCTGACA
GACATCATGAAAGAGCTCGAGCGGGTGCGGGTGCTGCACTACACCGAAGA
CGAGGATGTGATCCACGAGTGCTGCAACATGCCCGACGGCGAGCCTCCCA
CTATGACCCTCGCCATGATGAGCGACACCGGGCTTTTCCACATGGTTCGC
TACTACACGAACGGCGTCTTCAAGGCGTTCTGGAGAGATCTGCACGAACG
CAACTCCGATCTGCCCGAGACGACGAGGTTCGCCGAGAAGCACCGTCACG
AGTGCCTCTACATCGAAGAGATCGCCAACTCGCGGTAAATGACCCTCGCC
ATGATGAGCGACACCGGGCTTTTCCACATGGTTCGCTACTACACGAACGG
CGTCTTCAAGGCGTTCTGGAGAGATCTGCACGAACGCAACTCCGATCTGC
CCGAGACGACGAGGTTCGCCGAGAAGCACCGTCACGAGTGCCTCTACATC
GAAGAGATCGCCAACTCGCGGTAA
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