mRNA_E-fasciculatus_F_contig137.2739.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig137.2739.1 vs. uniprot
Match: D7FMH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH0_ECTSI) HSP 1 Score: 783 bits (2022), Expect = 5.490e-266 Identity = 445/581 (76.59%), Postives = 457/581 (78.66%), Query Frame = 1
Query: 1 QELWGPARSGHRTLANNPRVKEGAVRNTMERIIAESKLLREAAPKFEHFDRFGDSNGGSDQPKGNPPPTLQKSGGDGDGAGHHSSTNASVTAPAATKAGRTHPHFFHGLGPNARKLFMELYTENRSRLLAPISRRSAVVDGPVASSGRHLPAAPAPSDDTSLPSPATARNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVRHAAGAFAASGPPPDLDAGVLDRYGVLLGRLVEAATRIQRVRRLGGLPRAARRLRRRQRAVLAVQRIFRGHLGRRYASMWKVVAVLAATRLSAGWRRFSAQRKFLAFRALARAGAIGLQALFRGHVARRYAAWVASHYFAARNIQRGGRGFTARQVGCRARCKRATRAFELSGLPAILLIQKSIRGFLVRKAYKRRFQEAVRVKVIVPSAGVLQKCWRGKKGREEGALRRRMWAAAIEIQRHMRGFSKRMWWARVLFCRLEHAMATRIAAVGRGYIDRELVKARRAQRHFLHTITPACVLIQSQWRGYTRRRDLAMHKQRWLAALFIQVAYRGAVFRRHARRRYQAWLVRHKGFSATKIQ 1743
+ELWGPARSGHRTLANNPRVKEGAVR+TMERIIAESK LREAAPKFEHFDRFG+SNG +DQ KGNPPP +KSGG+ GAGH +TN SV PAATKAGRTHPHFFHGLGPNARKLFMELYTENRSRLLAPISRRSA V GPVASSGRHL AAPAP D TSLPSP TARN S XXXXXXXXXXX VRHAAGAFAASGPPPDLDAGVLDRYGVLLGRLVEAATRIQR RRLGGLPRAARRL RRQRAVLAVQR+FRGHLGR YASMWKVVAVLAATRLSAGWRRFS QRKFLAFRA ARAGAIGLQ +SIRGFLVRKAYKRRFQEAVRVKVIVPSAGVLQKCWRGKKGREEGALRRRMWAAAIEIQRH+RGFSKRMWWARVLFCRLEHAMATRIAAVGRGYIDRELVKARR+QRHFLHTITPACVLIQSQWRGYTRRRDLA HKQRWLAALFIQVAYRGAVFRRHARRRY+AWLVRHKGFSATKIQ
Sbjct: 919 EELWGPARSGHRTLANNPRVKEGAVRSTMERIIAESKALREAAPKFEHFDRFGESNGDADQTKGNPPPP-KKSGGESHGAGHQPNTNPSVATPAATKAGRTHPHFFHGLGPNARKLFMELYTENRSRLLAPISRRSADVAGPVASSGRHLSAAPAPPDGTSLPSPTTARNGSQLSISRQQQQQLHEKTPPREEGKSPRSVSGSFAAXXXXXXXXXXXE-NVRHAAGAFAASGPPPDLDAGVLDRYGVLLGRLVEAATRIQRERRLGGLPRAARRLWRRQRAVLAVQRVFRGHLGRSYASMWKVVAVLAATRLSAGWRRFSTQRKFLAFRARARAGAIGLQ--------------------------------------------------------------RSIRGFLVRKAYKRRFQEAVRVKVIVPSAGVLQKCWRGKKGREEGALRRRMWAAAIEIQRHVRGFSKRMWWARVLFCRLEHAMATRIAAVGRGYIDRELVKARRSQRHFLHTITPACVLIQSQWRGYTRRRDLAKHKQRWLAALFIQVAYRGAVFRRHARRRYEAWLVRHKGFSATKIQ 1435
BLAST of mRNA_E-fasciculatus_F_contig137.2739.1 vs. uniprot
Match: A0A6H5KC52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC52_9PHAE) HSP 1 Score: 644 bits (1660), Expect = 5.080e-212 Identity = 398/542 (73.43%), Postives = 410/542 (75.65%), Query Frame = 1
Query: 1 QELWGPARSGHRTLANNPRVKEGAVRNTMERIIAESKLLREAAPKFEHFDRFGDSNGGSDQPKGNPPPTLQKSGGDGDGAGHHSSTNASVTAPAATKAGRTHPHFFHGLGPNARKLFMELYTENRSRLLAPISRRSAVVDGPVASSGRHLPAAPAPSDDTSLPSPATARNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVRHAAGA---FAASGPPPDLDAGVLDRYGVLLGRLVEAATRIQRVRRLGGLPRAARRLRRRQRAVLAVQRIFRGHLGRRYASMWKVVAVLAATRLSAGWRRFSAQRKFLAFRALARAGAIGLQALFRGHVARRYAAWVASHYFAARNIQRGGRGFTARQVGCRARCKRA---TRAFELSGLPAILLIQKSIRGFLVRKAYKRRFQEAVRVKVIVPSAGVLQKCWRGKKGREEGALRRRMWAAAIEIQRHMRGFSKRMWWARVLFCRLEHAMATRIAAVGRGYIDRELVKARRAQRHFLHTITPACVLIQSQWRGYTRRRDLA 1608
QELWG ARSGHRTLAN+PRVKEG V++TMERIIAESK+LREAAPKFEHFDRFG+SNG +DQ KGNPPP SGG DGAGH +TN +V APAATKAGRTHPHFFHGLGPNARKLFMELYTENRSRLLAPISRRSA V GPVASSGRHLP APAP D TSLPSP TARN S XXXXXXXXXXXXXX XXXXXXXXXX FAASGPPPDLDAGVLDRYGVLLGRLVEAATRIQRVRRLGGLPRAARRLRRRQRAVLAVQR+FRGHLGRRYASMWKVVAVLAATRLSAGWRRFSAQRKFLAFRA ARAGAIGLQ V C+ARC + RAFEL GLPAILLIQ+SIRGFLVRKA RRFQEAVRVKVIVPSAGVLQKCWRGKKGREEGALRRRMWAAAIEIQ VGRGYIDRELVKARRAQRHFLHTITPACVLIQSQWRGYTRRRDLA
Sbjct: 942 QELWGAARSGHRTLANHPRVKEGIVKSTMERIIAESKVLREAAPKFEHFDRFGESNGDADQTKGNPPPPTT-SGGQSDGAGHQPNTNPAVAAPAATKAGRTHPHFFHGLGPNARKLFMELYTENRSRLLAPISRRSADVAGPVASSGRHLPVAPAPPDCTSLPSPTTARNGSQLSISWQQXXXXXXXXXXXXXXREKVKSPRSVSGSFAXXXXXXXXXXXXXXXXXXXXXFAASGPPPDLDAGVLDRYGVLLGRLVEAATRIQRVRRLGGLPRAARRLRRRQRAVLAVQRVFRGHLGRRYASMWKVVAVLAATRLSAGWRRFSAQRKFLAFRARARAGAIGLQ--------------------------------VGTLVSCQARCAWSIGEARAFELCGLPAILLIQRSIRGFLVRKACTRRFQEAVRVKVIVPSAGVLQKCWRGKKGREEGALRRRMWAAAIEIQ------------------------------VGRGYIDRELVKARRAQRHFLHTITPACVLIQSQWRGYTRRRDLA 1420
BLAST of mRNA_E-fasciculatus_F_contig137.2739.1 vs. uniprot
Match: D7FMH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH1_ECTSI) HSP 1 Score: 190 bits (483), Expect = 6.880e-50 Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 1
Query: 1744 CLFRQWQSRQSYRVLNVEASWRRTFATRIILRSWRSYKMNLALDELKEQWRVEKAALELAGAQRDVQEIKADLDLCMDDIAAVKKSIRNAKRRIKDLTEFRK 2049
CLFRQWQSRQSYR LNVEASWRRTFATRIILRSWRSYKMNLALDELKEQWRVEKAALELAGAQRD+QEIK DLDLC DDIAAVKKSIRNAKRRIKDLTEFRK
Sbjct: 15 CLFRQWQSRQSYRALNVEASWRRTFATRIILRSWRSYKMNLALDELKEQWRVEKAALELAGAQRDIQEIKGDLDLCTDDIAAVKKSIRNAKRRIKDLTEFRK 116
BLAST of mRNA_E-fasciculatus_F_contig137.2739.1 vs. uniprot
Match: A0A1V9ZBH2_9STRA (Carbon catabolite repressor protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBH2_9STRA) HSP 1 Score: 117 bits (292), Expect = 3.290e-23 Identity = 114/428 (26.64%), Postives = 183/428 (42.76%), Query Frame = 1
Query: 763 AATRIQRVRRLGGLPRAARRLRRRQRAVLAVQRIFRGHLGRRYASMWKVVAVLAATRLSAGWRRFSAQRKFLAFRALARAGAIGLQALFRGHVARRYAAWVASHYFAARNIQRGGRGFTARQVGCRARCKRATRAFELSGLPAILLIQKSIRGFLVRKAYKRRFQEAVRVKVIVPSAGVLQKCWRGKKGREEGALRRRMWAAAIEIQRHMRGFSKRMWWARVLFCRLEHAMATRIAAVGRGYIDRELVKARRAQRHFLHTITPACVLIQSQWRGYTRRRDLAMHKQRWLAALFIQVAYRGAVFRRHARRRYQAWLVRHKGFSATKIQCLFRQWQSRQSYRVLNVEASWRRTFATRIILRSWRSYKMNLALDELKEQWRVEKAALELAGAQRDVQEIKADLDLCMDDIAAVKKSIRNAKRRIKDLTEFR 2046
AA ++QR R + RR+ +R R + +QR++RG+L R + + +V A T + A +R F ++R A +A GAIGLQ +FRGH AR++A W+ H A R RA+ R L +PA+ L+ R A +Q R R+ W + + R + MA+RI A GRGY+ R+L K + + + PA +IQ +RGY R+ L ++ R AA IQ A+R + + R Y + R K F+A IQC+ R + +R+ + R +FA + +WRS+ L + +E ++E A + + +++ I D D A + K + A + I DL + R
Sbjct: 873 AAIKLQRHFRTKLQTKVLRRILKRHRHAITIQRVYRGYLARVFTTELFLVYTFATTHIQATYRSFISRRATKALKAKMIIGAIGLQRIFRGHKARKWALWLRYHVANAXXXXXXXXXXXGR---LRAQMFRHAHFKRLHVVPAVKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRTRTLQVEMARHLQHWYRDHLNRVKWDYIFYMRKLNRMASRIGAAGRGYLARQLYKREQRKERLQSVVIPAARVIQRVFRGYIVRKRLEEYRDRLEAATVIQYAWRKSKQKYKERIEYDTQIARMKDFNACTIQCMVRCFLARKHVLAKRLAQHGRYSFAAVKVQAAWRSFLSRKRLKQTRELVKLEIKARAMTTLKDELEMIHFDTMDASADKARLIKYKKKALQHIHDLKQMR 1297
BLAST of mRNA_E-fasciculatus_F_contig137.2739.1 vs. uniprot
Match: A0A7S2AVJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AVJ2_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 2.390e-20 Identity = 48/123 (39.02%), Postives = 78/123 (63.41%), Query Frame = 1
Query: 1297 VLQKCWRGKKGREEGALRRRMWAAAIEIQRHMRGFSKRMWWARVLFCRLEHAMATRIAAVGRGYIDRELVKARRAQRHFLHTITPACVLIQSQWRGYTRRRDLAMHKQRWLAALFIQVAYRGA 1665
V+ + W KGR G +R+ AAI +QRH+RGFSKR+W+ARV + AT ++ V RG+++RE+ + +R + + L + P +L+Q+++RGY RR+L K+ WL L I + ++GA
Sbjct: 2 VITRNWHAYKGRLVGNQKRKERDAAIVMQRHVRGFSKRVWFARVQELDVHAYYATELSRVYRGHVEREIFRRKRERDYHLRVMVPMVILVQTRYRGYVARRNLCRRKREWLPGLTIPIPFKGA 124
BLAST of mRNA_E-fasciculatus_F_contig137.2739.1 vs. uniprot
Match: A0A8K1FBI0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBI0_PYTOL) HSP 1 Score: 87.8 bits (216), Expect = 3.210e-14 Identity = 70/252 (27.78%), Postives = 120/252 (47.62%), Query Frame = 1
Query: 1171 ELSGLPAILLIQKSIRGFLVRKAYKRRFQ---EAVRVK-----------VIVPSAGVLQKCWRGKKGREEGALRRRMWAAAIEIQRHMRGFSKRMWWARVLFCRLEHAMATRIAAVGRGYIDRELVKARRAQRHFLHTITPACVLIQSQWRGYTRRRDLAMHKQRWLAALFIQVAYRGAVFRRHARRRYQAWLVRHKGFSATKIQCLFRQWQSRQSYRVLNVEASWRRTFATRIILRSWRSYKMNLALDELK 1884
E G PA + K+ G ++K KRR + A R++ ++ P+A +++ RG R + W A IQ+H + + W ++ R MA+RI A+GRGYI R+ + + +RHF + PA V IQ +RGY R+ L + R AA+ +Q +R + + R + + V + ATKIQ +R ++++++ +L + R A I +WRS+ + L E +
Sbjct: 217 EHKGSPAFQKLMKNSEGAFLKKYLKRRREYVLAATRLQRLLRRNSQTKTILDPAAVKIERIIRGFLARRLAKQYQVAWQKACIIQKHWKSYRYYKKWMELMEWRRRDRMASRIGALGRGYIARKFYRREKRRRHFQFVVQPAAVSIQRVFRGYMVRKGLEDIRDRVEAAITLQQMWRKHNRIKTIQNRLRGFRVAIRNAKATKIQHFYRCFRAKRTLMLLKMTERARHGRAAVAIQSAWRSHCSRVQLKEFR 468
BLAST of mRNA_E-fasciculatus_F_contig137.2739.1 vs. uniprot
Match: A0A6G0WCH9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCH9_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 9.260e-12 Identity = 66/232 (28.45%), Postives = 111/232 (47.84%), Query Frame = 1
Query: 1351 RRMWAAAIEIQRHMRGFSKRMWWARVLFCRLEHAMATRIAAVGRGYIDRELVKARRAQRHFLHTITPACVLIQSQWRGYTRRRDLAMHKQRWLAALFIQVAYRGAVFRRHARRRYQAWLVRHKGFSATKIQCLFRQWQSRQSYRVLNVEASWRRTFATRIILRSWRSYKMNLALDELKEQWRVEKAALELAGAQRDVQEIKADLDLCMDDIAAVKKSIRNAKRRIKDLTEFR 2046
RR AAA+ IQ R + R WA V R E+ MA+RI AV RGY+ R++ K + + PA IQ +RG+ R+ L + R AA +Q +R R ++Q + K SA IQC R + +RQ + ++ + A + +WRS+ ++ ++E +E A +L + ++ ++ DL D+A + K + A ++I D+ + R
Sbjct: 544 RRELAAALTIQEACRKYRARCRWAFVWQVRFENRMASRIGAVARGYLARQVYKRELRKVCVRKVVIPAVKTIQRVYRGHRVRKQLEDLRDRIEAATVLQYFWRKKKREGAERAKWQEMFTKLKLQSALVIQCAIRCYLARQEVQTKRLKQRGEYSDAALKVQSAWRSFCNRTSIKHMRELMVIEVFARKLTQVKDNLDNVQFDLIDAKADMALLTKHKKKALQQIHDIKQMR 775
BLAST of mRNA_E-fasciculatus_F_contig137.2739.1 vs. uniprot
Match: K3WKW0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKW0_GLOUD) HSP 1 Score: 66.6 bits (161), Expect = 1.050e-7 Identity = 53/199 (26.63%), Postives = 96/199 (48.24%), Query Frame = 1
Query: 1366 AAIEIQRHMRGFSKRMWWARVLFCRLEHAMATRIAAVGRGYIDRELVKARRAQRHFLHTITPACVLIQSQWRGYTRRRDLAMHKQRWLAALFIQVAYRGAVFRRHARRRYQAWLVRHKGFSATKIQCLFRQWQSRQSYRVLNVEASWRRTFATRIILRSWRSYKMNLALDELKEQWRVEKAALELAGAQRDVQEIKADL 1962
A + IQ+ R W ++ R H MA++I A+GRGY+ R+ +K + +R+F + PA V IQ +RGY R++L + AA+ +Q +R + + + + + + A +IQ +R +++RQ L + R A I +WRS+ + L E + +E+ A L + + I+ D+
Sbjct: 242 AVLLIQKFWRSVRYYKRWMDLMELRRRHRMASKIGALGRGYVARKFIKREKRRRYFQFVLQPAAVNIQRIFRGYMVRKNLEDVRDHIEAAITLQQMWRKQSKIKTIQDKLRGFRAAIRNAKAAQIQRSYRCYRARQQLLYLWMSYQARYGKAAVAIQSAWRSHCSRVQLKEFRFCSLIERKARSLTQCKELREMIEFDM 440
BLAST of mRNA_E-fasciculatus_F_contig137.2739.1 vs. uniprot
Match: A0A5D6XJP8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJP8_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 2.160e-6 Identity = 103/463 (22.25%), Postives = 172/463 (37.15%), Query Frame = 1
Query: 673 AGAFAASGP-PPDLDAGVLDRYGVLLGRLVEAATRIQRVRRLGGLPRAARRLRRRQRAVLAVQRIFRGHLGRRYASMWKVVAVLAATRLSAGWRRFSAQRKFLAFRALARAGAIGLQALFRGHVARRYAAWVASHYFAARNIQRGGRGFTARQVGCRARCKRATRAFELSGLPAILLIQKSIRGFLVRKAYKRRFQEAVRVKVIVPSAGVLQKCWRGKKGREEGALRRRMWAAAIEIQRHMRGFSKRMWWARVLFCRLEHAMATRIAAVGRGYIDRELVKARRAQRHFLHTITPACVLIQSQWRGYTRRRDLAMHKQRWLAALFIQVAYRGAVFRRHARRRYQAWLVRHKGFSATKIQCLFRQWQSRQSYRVLNVEASWRRTF--ATRIILRSWRSYKMNLALDELKEQWRVEKAALELAGAQRDVQEIKADLDLCMDDIAAVKKSIRNAKRRIKDLTEFRKA 2052
AG AA P + +A + RY V+ A ++QR R R R + RQR L +QR+ RGH R+YA + V AA ++ WV +A ++R RGF AR+ R R R RA + P+++ + R AAA +Q+ R R W ++ R +A+++ A+GRG++ R+ + + ++H + PA IQ +RGY R+ + AA+ +Q +R + R R + + + A +IQ + ++R +L + ++R T+ A I +WRS+ L + +E+ A L + + I+ D D+ V K + RRIK+L R A
Sbjct: 391 AGDSAARHPLRKNTEATFVKRYLKRRREYVQVALKLQRTVRARSQRRVLREIFLRQRGALTIQRLVRGHRTRKYARAYYRVMTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFVRWVRRLESSALLVERVARGFMARRRVKRIRAARYKRAVLV---PSVVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLASRFREANAAARRLQQFWRAVRYRKRWVNLMELRRRDRLASKLGAIGRGFVARKFFRREKRKQHLRRVVQPAAAAIQRIFRGYVARKRTEELRDTTEAAITLQQMWRKRSTIKTIRERLRGFRASLREARAAQIQRCYXXXRARAQ--LLFLRMAYRATYGKAATAIQSAWRSHCSREQLKAFRICALIERKACALTQWKEAREMIELDAADARADLQRVLKYKAKSLRRIKELKAMRLA 848 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig137.2739.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig137.2739.1 >prot_E-fasciculatus_F_contig137.2739.1 ID=prot_E-fasciculatus_F_contig137.2739.1|Name=mRNA_E-fasciculatus_F_contig137.2739.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=684bp QELWGPARSGHRTLANNPRVKEGAVRNTMERIIAESKLLREAAPKFEHFDback to top mRNA from alignment at E-fasciculatus_F_contig137:28691..37788- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig137.2739.1 ID=mRNA_E-fasciculatus_F_contig137.2739.1|Name=mRNA_E-fasciculatus_F_contig137.2739.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9098bp|location=Sequence derived from alignment at E-fasciculatus_F_contig137:28691..37788- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig137:28691..37788- >mRNA_E-fasciculatus_F_contig137.2739.1 ID=mRNA_E-fasciculatus_F_contig137.2739.1|Name=mRNA_E-fasciculatus_F_contig137.2739.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4104bp|location=Sequence derived from alignment at E-fasciculatus_F_contig137:28691..37788- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |