mRNA_E-fasciculatus_F_contig137.2734.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig137.2734.1
Unique NamemRNA_E-fasciculatus_F_contig137.2734.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig137.2734.1 vs. uniprot
Match: A0A6H5KDH3_9PHAE (Smr domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDH3_9PHAE)

HSP 1 Score: 1578 bits (4087), Expect = 0.000e+0
Identity = 874/1044 (83.72%), Postives = 918/1044 (87.93%), Query Frame = 2
Query:  371 MWQSNGRAPRGKSKGQGXXXXXXXXXXXXXXPGGYRILVLAGIPGSGKSTLASFLEDMGWCVCLNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSISLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLASAGIVKRVARDFRPPHRKEGFHTVLRCQGDQDLSEAVALLSLTAGSDGALGTKRAPAPPATAAGNDRVRGDFGGDIGWWRSVDSVRMFPDQSLAAAAEGSQWPINSCPPGGEGTVATGPAVHHAVETFFPVEKGATAAEMAAKLPGAAPGQGGETYHTPAAADAPMPRPEDDGGPVLAWVGQQQVGGGSATGPVAWTRDAVGDNRRTAAHDSTSYPSLPSAMNGNNSGRFVGSLQKQSPHPPTQRGYKSSSLNSIARLTPQSQAEAPASVP--VKPKTRLLTPAEISASFSDFQAPPRVLAPEDVGVAASTRTNRLGTGPAAAAGAKQDKDHSHAQPAVLPLGPNSLEEWTFRSTLPIRGNEEVGSTCNSSYRSEDAAPADGGLAYDHRERVTAEAGDGDDQTDGEEGDLDVSDGEAFFVLEDMFGGLLPPETLENLFVESGKSLEKAVKEGFKVCEGLWGRGEVITFPDSPSSDGTTTDDFLTPSTSAGTDVSTNETCSESWEDETHGNFADVSHWTHKQVDTLTELCLAFEATISRETIIAALTASDHDATSAAQLLLDPGPANSRERREGRRSRLYRGVAQRERKARPLRSDGSLPTATLLGATCGVDHKAGALGGRGWEEEEEDAEGXXXXXM-----DEGLSSEEYRTRANAAAEEMKAWFQKAAEAFTRGGRNGGAAAADPSRIGQRWKKSMETANLRAAREAFRERNPLIRVGHTHDGVSVLKVLRLPEPSQCSTLGQLSVDLHLLRRAEALNVLETVLHAIRRRAGEHTGALYNQPRAPKPSLQLQDHPDVVAAAAGHVGPGGQTAAPSASASHTPPAAQ-GEGLQHDRVIHVQKFASLEVVVGRGAHSVAGVPRLRPCVAGYLAGKGFRAEAVEGDKGKGVVVVRLR 3478
            MWQSNGRAPRGK KGQG  XXXXXXXXXXXX GGYRILVLAGIPGSGKSTLASFLEDMGW V +NQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVS SLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLASAGIVKR A+DFRPPHRKEGFHTVLRC GDQDLSEA+ALLSL+AGSDGA GT+RAPAPPAT AG+DRV GD GG  GW R VDSV M  DQSLA   EGSQW +NSCPPG  G VAT P VHHAV+ FFPVEKGAT A MA KLPGAAPGQGG TYHTPA+ADAPM RPE D GPVLA  GQQQVGGG A GPVA TRDAVG+N RTAA+D+TS PSLPSAMNG+  GRFVGSL+KQ PH P QRG+ SSSLNSIA+LT QSQAEA ASV   +KPKTRLLTPAEI ++FSD QAPPRVLAPEDVGVAAS RT+RLGTGP AAA  K+D+DHS AQP VLPLGPNS+EEW  RST PI+GNEE G+T NSSYRSE+AA A+GG A+DHRERV A A DGDDQT+ EE DLDVSDGEAFFVLEDMFGGLLPPETLENLF ESG  LEKAVKEGFKVCEGLWG+GEVITFPDSPSSDGTTTDDFLTPSTSAGTDVSTNE  S++ +DETHG FADV HWT KQVDTLTELCLAFEATISRETIIAALTASDHDATSAAQLLLDP PAN RER EGRRSR +RGVAQRERKARP RSD SLPTAT LGATCGVDH+AGAL  R WEEE  DAEGXXXXX      DEGL+SEEYRTRANAAAE+MKAWFQKAAEAF RGGRNGGAAAADPSRIGQRWKKSMETANLRAAREAFRERNPLIRVGHTHDGVSVLKVLRLPEPSQCST GQLSVDLHLLRRAEALNVLETVLHAIRRRAGEH+  L N+PRAPK S QL++HPDVVAAAAG      QT    + AS+TPP AQ GEGLQHDRVI VQKFASLEVVVGRGAHSVAGVPRLRPCV GYLAGKGFRAE VEGD+GKGVVVV LR
Sbjct:    1 MWQSNGRAPRGKYKGQGKQXXXXXXXXXXXXXGGYRILVLAGIPGSGKSTLASFLEDMGWSV-VNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSHSLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLASAGIVKRYAKDFRPPHRKEGFHTVLRCHGDQDLSEAIALLSLSAGSDGAPGTERAPAPPATTAGSDRVGGDLGGGTGWRRGVDSVGMCWDQSLAE--EGSQWNMNSCPPGEVGAVATAPTVHHAVDIFFPVEKGATTAGMATKLPGAAPGQGGVTYHTPASADAPMTRPEYDRGPVLACGGQQQVGGGGAAGPVARTRDAVGNNGRTAANDATSDPSLPSAMNGDKRGRFVGSLEKQLPHRPKQRGFTSSSLNSIAKLTSQSQAEALASVKQSLKPKTRLLTPAEICSNFSDLQAPPRVLAPEDVGVAASARTDRLGTGPTAAATGKRDEDHSCAQPVVLPLGPNSIEEWPSRSTFPIQGNEENGNTGNSSYRSEEAATAEGGQAHDHRERVPAGAWDGDDQTNEEEADLDVSDGEAFFVLEDMFGGLLPPETLENLFAESGNYLEKAVKEGFKVCEGLWGQGEVITFPDSPSSDGTTTDDFLTPSTSAGTDVSTNENGSDTRDDETHGKFADVLHWTPKQVDTLTELCLAFEATISRETIIAALTASDHDATSAAQLLLDPRPANPRERGEGRRSRPHRGVAQRERKARPPRSDDSLPTATSLGATCGVDHRAGALSERQWEEE--DAEGXXXXXXXXXXGDEGLTSEEYRTRANAAAEQMKAWFQKAAEAFIRGGRNGGAAAADPSRIGQRWKKSMETANLRAAREAFRERNPLIRVGHTHDGVSVLKVLRLPEPSQCSTPGQLSVDLHLLRRAEALNVLETVLHAIRRRAGEHSRVLVNRPRAPKQSQQLKEHPDVVAAAAG------QTEPSYSGASYTPPVAQQGEGLQHDRVIRVQKFASLEVVVGRGAHSVAGVPRLRPCVMGYLAGKGFRAEGVEGDRGKGVVVVGLR 1033          
BLAST of mRNA_E-fasciculatus_F_contig137.2734.1 vs. uniprot
Match: D7FMH4_ECTSI (Smr domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH4_ECTSI)

HSP 1 Score: 1387 bits (3589), Expect = 0.000e+0
Identity = 774/998 (77.56%), Postives = 805/998 (80.66%), Query Frame = 2
Query:  560 LNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSISLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLASAGIVKRVARDFRPPHRKEGFHTVLRCQGDQDLSEAVALLSLTAGSDGALGTKRAPAPPATAAGNDRVRGDFGGDIGWWRSVDSVRMFPDQSLAAAAEGSQWPINSCPPGGEGTVATGPAVHHAVETFFPVEKGATAAEMAAKLPGAAPGQGGETYHTPAAADAPMPRPEDDGGPVLAW-----------------------VGQQQVGGGSATGPVAWTRDAVGDNRRTAAHDSTSYPSLPSAMNGNNSGRFVGSLQKQSPHPPTQRGYKSSSLNSIARLTPQSQAEAPASV--PVKPKTRLLTPAEISASFSDFQAPPRVLAPEDVGVAASTRTNRLGTGPAAAAGAKQDKDHSHAQPAVLPLGPNSLEEWTFRSTLPIRGNEEVGSTCNSSYRSEDAAPADGGLAYDHRERVTAEAGDGDDQTDGEEGDLDVSDGEAFFVLEDMFGGLLPPETLENLFVESGKSLEKAVKEGFKVCEGLWGRGEVITFPDSPSSDGTTTDDFLTPSTSAGTDVSTNETCSESWEDETHGNFADVSHWTHKQVDTLTELCLAFEATISRETIIAALTASDHDATSAAQLLLDPGPANSRERREGRRSRLYRGVAQRERKARPLRSDGSLPTATLLGATCGVDHKAGALGGRGWEEEEEDAEGXXXXXMDEGLSSEEYRTRANAAAEEMKAWFQKAAEAFTRGGRNGGAAAADPSRIGQRWKKSMETANLRAAREAFRERNPLIRVGHTHDGVSVLKVLRLPEPSQCSTLGQLSVDLHLLRRAEALNVLETVLHAIRRRAGEHTGALYNQPRAPKPSLQLQDHPDVVAAAAGHVGPGGQTAAPSASASHTPPAAQ-GEGLQHDRVIHVQKFASLEVVVGRGAHSVAGVPRLRPCVAGYLAGKGFRAEAVEGDKGKGVVVVRL 3475
            +NQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVS+SLHKDACIAVWLDIPI                                                                 GSDGA GT+RAPAPPATAAG+DRV GDFGG  GW R VDSV MF DQSLA   EGSQW I+SCPPGG G VAT PAVHHAV+TFFPVEK ATAA MAAKLPGAAPGQ G TYHTPAAADAPM RP DD GPVLAW                         QQQVGGG A GPVA TRDAVG+N  TAAHD+TSYPSLPSAMNGN SGRFVGSLQKQ P  P QRG+KSSSLNSIA+LTPQSQAEAPASV  PVKPKTRLLTP EIS+ FSD QAPPRVLAPEDVGVAAS   NRL TGPAA A AK+ KDHS AQP VL LGPNS EEWT RSTLPIRGNEE  +T NSSYRSE+AA A+GG  +DHRERV A AGD DDQTDGEE DLDVSDGEAFFVLEDMFGGLLPPETLENLF ESGK LEKAVKEGFKVCEGLWG+GE ITFP+SPSSDG+TTDDFLTPSTSAGTDVSTNE  SESW+DETHG FADVSHWTHKQVDTLTELCLAFEATISRETIIAALTAS+HDATSAAQLLLDPGPAN RER EGRRSR Y GVAQRERKARP R DG LPTATLLGATCGVDH+AGALG RGWEEE+ +   XXXXX DEGL+SEEYRTRANAAAE MKAWFQKAAEAFTRGGRNGGAAAADPSRIGQRWKKSMETANLRAAREAFRERNPLIRVGHT DGV+VLKVLRLPEPSQCST GQLSVDLHLLRRAEALNVLETVLHAIRRRAGEHTG L N PRAPKPS Q ++HP VVAA      PGG T   S+ AS+TPPAAQ GEGLQHDRV+ V KFASLEVVVGRGAHSVAGVPRLRPCV GYLAGKGFRAEAVEGDKGKGVVVV L
Sbjct:   13 VNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSLSLHKDACIAVWLDIPI-----------------------------------------------------------------GSDGAPGTERAPAPPATAAGSDRVGGDFGGGTGWRRGVDSVEMFRDQSLAE--EGSQWNIDSCPPGGVGAVATAPAVHHAVDTFFPVEKSATAAGMAAKLPGAAPGQWGVTYHTPAAADAPMTRPADDFGPVLAWGEDQRAAEDTAIPXXXXXXXXXXXXQQQVGGGGAAGPVARTRDAVGNNGWTAAHDATSYPSLPSAMNGNKSGRFVGSLQKQLPRRPKQRGFKSSSLNSIAKLTPQSQAEAPASVKQPVKPKTRLLTPTEISSRFSDLQAPPRVLAPEDVGVAASAGINRLETGPAATAAAKRGKDHSFAQPVVLALGPNSFEEWTSRSTLPIRGNEENRNTSNSSYRSEEAATAEGGQTFDHRERVKAGAGDDDDQTDGEEVDLDVSDGEAFFVLEDMFGGLLPPETLENLFAESGKYLEKAVKEGFKVCEGLWGQGEAITFPNSPSSDGSTTDDFLTPSTSAGTDVSTNENGSESWDDETHGEFADVSHWTHKQVDTLTELCLAFEATISRETIIAALTASNHDATSAAQLLLDPGPANPRERGEGRRSRRYGGVAQRERKARPPRYDGCLPTATLLGATCGVDHRAGALGERGWEEEDAEGXXXXXXXGDEGLTSEEYRTRANAAAELMKAWFQKAAEAFTRGGRNGGAAAADPSRIGQRWKKSMETANLRAAREAFRERNPLIRVGHTRDGVAVLKVLRLPEPSQCSTPGQLSVDLHLLRRAEALNVLETVLHAIRRRAGEHTGVLVNGPRAPKPSQQHKEHPGVVAA------PGGHTEPSSSGASYTPPAAQQGEGLQHDRVMSVLKFASLEVVVGRGAHSVAGVPRLRPCVMGYLAGKGFRAEAVEGDKGKGVVVVGL 937          
BLAST of mRNA_E-fasciculatus_F_contig137.2734.1 vs. uniprot
Match: A0A7S4VHJ8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VHJ8_9DINO)

HSP 1 Score: 117 bits (294), Expect = 1.580e-23
Identity = 70/152 (46.05%), Postives = 91/152 (59.87%), Query Frame = 2
Query:  476 RILVLAGIPGSGKSTLASFLE-DMGWCVCLNQDTLGSREKCRRRAQQVLEK-GGRVLIDRCNFDQSQRVTWLDLAVS-ISLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLASAGIVKRVARDFRPPHRKEGFHTVLRCQGDQDLSEA 922
            R+LVL G+PGSGKSTLA+ L  ++GW V +NQD LGSR+ C + A+  L   GGRV+IDRCN D SQR  W+ LA+    L       VWLD+P + C  RV  R GH TL    +S  +++  A  + PP  +EGF  + R     D SEA
Sbjct:  174 RMLVLCGLPGSGKSTLAARLRAELGWEV-VNQDALGSRQACMKAARDHLRSPGGRVVIDRCNADVSQRAVWVQLALQEFGLGALEIGCVWLDVPAEECDRRVLGRFGHRTLPPQASSLRVIRGFAASWEPPTAEEGFARLWRLASALD-SEA 323          
BLAST of mRNA_E-fasciculatus_F_contig137.2734.1 vs. uniprot
Match: A0A813GQ52_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GQ52_POLGL)

HSP 1 Score: 117 bits (293), Expect = 1.280e-22
Identity = 63/136 (46.32%), Postives = 84/136 (61.76%), Query Frame = 2
Query:  476 RILVLAGIPGSGKSTLASFLEDMGWCVCLNQDTLGSREKCRRRAQQVLEKG-GRVLIDRCNFDQSQRVTWLDLAVS-ISLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLASAGIVKRVARDFRPPHRKEGF 877
            R+LVL G+PGSGKSTLAS   + GW V +NQD+LGSR+ C + A++ L +  GR+++DRCN D SQR  W+ LA+    L       VWLD+  + C  RV  R GH TL    AS  ++K  A  ++PP   EGF
Sbjct: 1310 RVLVLCGLPGSGKSTLASRFAEQGWEV-VNQDSLGSRQACMKAARRALSRPQGRLVVDRCNADVSQRAIWIQLAMQDFGLSPAELGCVWLDVQHEECGLRVLQRFGHSTLPPRQASLKVIKSFASSWQPPTSSEGF 1444          
BLAST of mRNA_E-fasciculatus_F_contig137.2734.1 vs. uniprot
Match: A0A137P251_CONC2 (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P251_CONC2)

HSP 1 Score: 105 bits (263), Expect = 2.300e-22
Identity = 58/159 (36.48%), Postives = 90/159 (56.60%), Query Frame = 2
Query:  479 ILVLAGIPGSGKSTLASFLEDMGWCVC------LNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSISLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLASAGIVKRVARDFRPPHRKEGFHTVLRCQGDQDLSEAVALLS 937
            IL+L G PGSGK+  + +     WC        +NQD LGSR  C  + ++ + +G  V+IDRCNF++SQR  W+DLA  ++++ +    ++LDIPI+V + R+  R GHPT   G     ++++ +  FR P   EGF  V+  +  Q  +E   L S
Sbjct:    4 ILLLVGTPGSGKTHFSEY-----WCKSFPNYKRVNQDDLGSRVDCEIQTRKYISRGFDVIIDRCNFNKSQRKVWIDLARELNVYINC---IYLDIPIEVSKERILRRSGHPTQVQGYEGVEVLEKFSSQFRKPGHYEGFRNVIYLKHSQLETEHTLLNS 154          
BLAST of mRNA_E-fasciculatus_F_contig137.2734.1 vs. uniprot
Match: A0A250WR76_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WR76_9CHLO)

HSP 1 Score: 105 bits (262), Expect = 2.570e-22
Identity = 62/164 (37.80%), Postives = 91/164 (55.49%), Query Frame = 2
Query:  479 ILVLAGIPGSGKSTLASFLEDMGWCVCLNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSISLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLASAGIVKRVARDFRPPHRKEGFHTVLRCQGDQDLSEAVALLS--LTAGSDGAL 964
            +++L GIPGSGK+T A  L        +NQDTLG+R  C   A+  L +G  V+IDRCNFD+SQR  W+ LA     ++   IAV L +P++VC  RVQ R  HPTL     +  +  R++      +  EGF+ VL  +  +++          +TAG+ GA+
Sbjct:    4 LVILVGIPGSGKTTFAQELSKRSAWDWINQDTLGNRYACEEAARVALSQGHNVIIDRCNFDESQRSVWVRLAQETCQNRVQIIAVQLLMPLEVCIARVQRRRSHPTLRPADGTR-VCGRMSNLLSIAYLGEGFNAVLTARRPEEVQRLYQHFEELVTAGAAGAV 166          
BLAST of mRNA_E-fasciculatus_F_contig137.2734.1 vs. uniprot
Match: A0A8J9SG03_9CHLO (Probable bifunctional polynucleotide phosphatase/kinase at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SG03_9CHLO)

HSP 1 Score: 111 bits (278), Expect = 1.970e-21
Identity = 62/153 (40.52%), Postives = 86/153 (56.21%), Query Frame = 2
Query:  476 RILVLAGIPGSGKSTLASFLEDMGWCVCLNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSISLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLASAGIVKRVARDFRPPHRKEGFHTVLRCQGDQDLSEAVALL 934
            R+++LAG+PGSGK+T+A  L+++GW V +NQDTLGSR  C       L  G  V++DRCNFD SQR  +L+LA           A+ L  P+  C  R + R  HPTL  G    GI+ R A +F   HR EGF  V      +++   + L+
Sbjct:   20 RVIILAGLPGSGKTTVAKQLQNLGW-VWVNQDTLGSRRACEEALVSALHAGREVVVDRCNFDVSQRSFFLNLACRCEAE---VTALQLTTPVKECIRRAKGRRDHPTLN-GDNIEGIITRFASEFVAVHRHEGFRDVHTAANAEEIDRFIRLM 167          
BLAST of mRNA_E-fasciculatus_F_contig137.2734.1 vs. uniprot
Match: A0A2G4SWL6_RHIZD (P-loop containing nucleoside triphosphate hydrolase protein n=3 Tax=Rhizopus TaxID=4842 RepID=A0A2G4SWL6_RHIZD)

HSP 1 Score: 101 bits (252), Expect = 7.060e-21
Identity = 58/142 (40.85%), Postives = 81/142 (57.04%), Query Frame = 2
Query:  476 RILVLAGIPGSGKSTLASFLEDM--GWCVCLNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSISLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLASAGIVKRVARDFRPPH--RKEGFHTVL 889
            RIL+L G+PGSGKSTL+  L     GW   +NQD +GSR+ C   A++ L K   ++IDRCNFD+ QR TW+DL    ++  D  +    +     C  R+Q R  HPT   G +   I+K+  R++RPP   + EG   VL
Sbjct:    4 RILLLVGLPGSGKSTLSKELVKCKSGW-ERINQDDMGSRKACEMHAKRFLNKKLSIVIDRCNFDEKQRKTWVDLGQKYNVPVDCIVLTTTE---QECSERIQCREDHPTGVIGDSGVQILKKFMRNYRPPRIDQLEGIQRVL 141          
BLAST of mRNA_E-fasciculatus_F_contig137.2734.1 vs. uniprot
Match: A0A2J7ZVC4_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZVC4_9CHLO)

HSP 1 Score: 109 bits (272), Expect = 9.220e-21
Identity = 61/149 (40.94%), Postives = 85/149 (57.05%), Query Frame = 2
Query:  479 ILVLAGIPGSGKSTLASFLEDMGWCVCLNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLA-VSISLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLASAGIVKRVARDFRPPHRKEGFHTVLRCQGDQDLSEA 922
            +LVL G+PGSGKS L+  LE  GW   +NQD LGSR  C       L+    V++DRCNFD +QR  W+ LA  + S      +A+ L +P+ +C+ R ++R  HPTLG       ++ R A DF P  ++EGFH VL  +  Q+   A
Sbjct:    5 VLVLVGVPGSGKSFLSRRLEMRGWAR-INQDELGSRRACEDAYCSALQLRRHVVVDRCNFDVTQRSHWVRLAHAARSPSGVVLVALQLLVPLPLCKERARARTDHPTLGPHNCDE-VIGRFASDFVPASQREGFHRVLTARSSQEAEAA 151          
BLAST of mRNA_E-fasciculatus_F_contig137.2734.1 vs. uniprot
Match: A0A0F7SN61_PHARH (Polynucleotide kinase 3' phosphatase n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SN61_PHARH)

HSP 1 Score: 100 bits (249), Expect = 6.460e-20
Identity = 58/139 (41.73%), Postives = 84/139 (60.43%), Query Frame = 2
Query:  479 ILVLAGIPGSGKSTLASFLEDMGWCVCLNQDTL-GSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSISLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLASAGIVKRVARDFRPPHRKEGFHTVLR 892
            +L+L G+ GSGKST+A+ LE     V  NQD + G+R    ++  Q L+ G  V++DR NFD SQR  +L+++ +    K    A++LDIP DVC+ R+ +R  HPTL    A   ++ R ++D RPP   EGFH V R
Sbjct:    7 LLILVGVVGSGKSTVANELETEHGYVRCNQDEMQGNRHLVEQKVYQALQNGKNVVVDRTNFDSSQRSKFLNISSNFPHVKKW--ALFLDIPKDVCRTRLLTRTNHPTLEPERAIM-VLNRFSKDLRPPTVNEGFHRVYR 142          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig137.2734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDH3_9PHAE0.000e+083.72Smr domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FMH4_ECTSI0.000e+077.56Smr domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S4VHJ8_9DINO1.580e-2346.05Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A813GQ52_POLGL1.280e-2246.32Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A137P251_CONC22.300e-2236.48p-loop containing nucleoside triphosphate hydrolas... [more]
A0A250WR76_9CHLO2.570e-2237.80Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A8J9SG03_9CHLO1.970e-2140.52Probable bifunctional polynucleotide phosphatase/k... [more]
A0A2G4SWL6_RHIZD7.060e-2140.85P-loop containing nucleoside triphosphate hydrolas... [more]
A0A2J7ZVC4_9CHLO9.220e-2140.94Uncharacterized protein n=1 Tax=Tetrabaena sociali... [more]
A0A0F7SN61_PHARH6.460e-2041.73Polynucleotide kinase 3' phosphatase n=1 Tax=Phaff... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig137contigE-fasciculatus_F_contig137:880..9753 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score116.3
Seed ortholog evalue8.4e-23
Seed eggNOG ortholog55529.EKX54840
KEGG koko:K08073,ko:K14165
EggNOG free text desc.DNA-3'-diphospho-5'-guanosine diphosphatase
EggNOG OGsCOG0241@1,KOG2134@2759
EC2.7.1.78,3.1.3.16,3.1.3.32,3.1.3.48
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionALIX V-shaped and BRO1-like domain protein
Ec32 orthologEc-23_000310.1
Exons9
Model size4164
Cds size3111
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927863.6195257-UTR-E-fasciculatus_F_contig137:879..15621622927863.6195257-UTR-E-fasciculatus_F_contig137:879..1562Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig137 880..1562 -
1695995728.6735642-UTR-E-fasciculatus_F_contig137:879..15621695995728.6735642-UTR-E-fasciculatus_F_contig137:879..1562Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig137 880..1562 -
1622927863.8260777-UTR-E-fasciculatus_F_contig137:9383..97531622927863.8260777-UTR-E-fasciculatus_F_contig137:9383..9753Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig137 9384..9753 -
1695995728.7809572-UTR-E-fasciculatus_F_contig137:9383..97531695995728.7809572-UTR-E-fasciculatus_F_contig137:9383..9753Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig137 9384..9753 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927863.630181-CDS-E-fasciculatus_F_contig137:1562..20601622927863.630181-CDS-E-fasciculatus_F_contig137:1562..2060Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 1563..2060 -
1695995728.6868346-CDS-E-fasciculatus_F_contig137:1562..20601695995728.6868346-CDS-E-fasciculatus_F_contig137:1562..2060Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 1563..2060 -
1622927863.6398757-CDS-E-fasciculatus_F_contig137:2893..30501622927863.6398757-CDS-E-fasciculatus_F_contig137:2893..3050Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 2894..3050 -
1695995728.6943688-CDS-E-fasciculatus_F_contig137:2893..30501695995728.6943688-CDS-E-fasciculatus_F_contig137:2893..3050Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 2894..3050 -
1622927863.6511736-CDS-E-fasciculatus_F_contig137:3578..40331622927863.6511736-CDS-E-fasciculatus_F_contig137:3578..4033Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 3579..4033 -
1695995728.7022161-CDS-E-fasciculatus_F_contig137:3578..40331695995728.7022161-CDS-E-fasciculatus_F_contig137:3578..4033Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 3579..4033 -
1622927863.6726172-CDS-E-fasciculatus_F_contig137:4313..45351622927863.6726172-CDS-E-fasciculatus_F_contig137:4313..4535Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 4314..4535 -
1695995728.7100658-CDS-E-fasciculatus_F_contig137:4313..45351695995728.7100658-CDS-E-fasciculatus_F_contig137:4313..4535Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 4314..4535 -
1622927863.6933715-CDS-E-fasciculatus_F_contig137:4750..61471622927863.6933715-CDS-E-fasciculatus_F_contig137:4750..6147Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 4751..6147 -
1695995728.7298477-CDS-E-fasciculatus_F_contig137:4750..61471695995728.7298477-CDS-E-fasciculatus_F_contig137:4750..6147Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 4751..6147 -
1622927863.7110345-CDS-E-fasciculatus_F_contig137:6386..64901622927863.7110345-CDS-E-fasciculatus_F_contig137:6386..6490Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 6387..6490 -
1695995728.7408957-CDS-E-fasciculatus_F_contig137:6386..64901695995728.7408957-CDS-E-fasciculatus_F_contig137:6386..6490Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 6387..6490 -
1622927863.7837775-CDS-E-fasciculatus_F_contig137:6792..68801622927863.7837775-CDS-E-fasciculatus_F_contig137:6792..6880Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 6793..6880 -
1695995728.7505665-CDS-E-fasciculatus_F_contig137:6792..68801695995728.7505665-CDS-E-fasciculatus_F_contig137:6792..6880Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 6793..6880 -
1622927863.7997766-CDS-E-fasciculatus_F_contig137:7304..74521622927863.7997766-CDS-E-fasciculatus_F_contig137:7304..7452Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 7305..7452 -
1695995728.7605443-CDS-E-fasciculatus_F_contig137:7304..74521695995728.7605443-CDS-E-fasciculatus_F_contig137:7304..7452Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 7305..7452 -
1622927863.8131554-CDS-E-fasciculatus_F_contig137:9341..93831622927863.8131554-CDS-E-fasciculatus_F_contig137:9341..9383Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 9342..9383 -
1695995728.7708118-CDS-E-fasciculatus_F_contig137:9341..93831695995728.7708118-CDS-E-fasciculatus_F_contig137:9341..9383Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig137 9342..9383 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig137.2734.1prot_E-fasciculatus_F_contig137.2734.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig137 1563..9383 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig137.2734.1

>prot_E-fasciculatus_F_contig137.2734.1 ID=prot_E-fasciculatus_F_contig137.2734.1|Name=mRNA_E-fasciculatus_F_contig137.2734.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1037bp
MWQSNGRAPRGKSKGQGKHRGRAPRPPPAPPPGGYRILVLAGIPGSGKST
LASFLEDMGWCVCLNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQ
RVTWLDLAVSISLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLASA
GIVKRVARDFRPPHRKEGFHTVLRCQGDQDLSEAVALLSLTAGSDGALGT
KRAPAPPATAAGNDRVRGDFGGDIGWWRSVDSVRMFPDQSLAAAAEGSQW
PINSCPPGGEGTVATGPAVHHAVETFFPVEKGATAAEMAAKLPGAAPGQG
GETYHTPAAADAPMPRPEDDGGPVLAWVGQQQVGGGSATGPVAWTRDAVG
DNRRTAAHDSTSYPSLPSAMNGNNSGRFVGSLQKQSPHPPTQRGYKSSSL
NSIARLTPQSQAEAPASVPVKPKTRLLTPAEISASFSDFQAPPRVLAPED
VGVAASTRTNRLGTGPAAAAGAKQDKDHSHAQPAVLPLGPNSLEEWTFRS
TLPIRGNEEVGSTCNSSYRSEDAAPADGGLAYDHRERVTAEAGDGDDQTD
GEEGDLDVSDGEAFFVLEDMFGGLLPPETLENLFVESGKSLEKAVKEGFK
VCEGLWGRGEVITFPDSPSSDGTTTDDFLTPSTSAGTDVSTNETCSESWE
DETHGNFADVSHWTHKQVDTLTELCLAFEATISRETIIAALTASDHDATS
AAQLLLDPGPANSRERREGRRSRLYRGVAQRERKARPLRSDGSLPTATLL
GATCGVDHKAGALGGRGWEEEEEDAEGEEEEEMDEGLSSEEYRTRANAAA
EEMKAWFQKAAEAFTRGGRNGGAAAADPSRIGQRWKKSMETANLRAAREA
FRERNPLIRVGHTHDGVSVLKVLRLPEPSQCSTLGQLSVDLHLLRRAEAL
NVLETVLHAIRRRAGEHTGALYNQPRAPKPSLQLQDHPDVVAAAAGHVGP
GGQTAAPSASASHTPPAAQGEGLQHDRVIHVQKFASLEVVVGRGAHSVAG
VPRLRPCVAGYLAGKGFRAEAVEGDKGKGVVVVRLR*
back to top

mRNA from alignment at E-fasciculatus_F_contig137:880..9753-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig137.2734.1 ID=mRNA_E-fasciculatus_F_contig137.2734.1|Name=mRNA_E-fasciculatus_F_contig137.2734.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=8874bp|location=Sequence derived from alignment at E-fasciculatus_F_contig137:880..9753- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCGGGTCCCAACTGTCCCACAGCAGGCTGTCTGACAAACCATTTGCCCGA TCTCCGTCGAGCTTCCCCGCCATTCCCCGCCATCCATCCCGCTTCTACCC GCCACGCACTACTCACCCACCCCCGAAGCATCTCGCGCAGCCATCGGTTT GGTACCTACAGACGCGCAGGTTACCACCCGATCGTGCATTAATTCCCGAC TCCTCCTGTCAATGTTGTCGCAGGCGTGTGTCACGTCTTACAAGCCCACA TTGACGTCACTCATAAGCGTGAACCGGGTTTGCTGCTGCTGCTTTCTCGA GCGTGGCGGAAGAAGCACCACCAGCACGACCACCGATCCACCGCCACTCC CCTAAGAAAACCTTGAGACAATGTGGCAATCGAATGGCAGGGCGCCCAGG GGTAAATCGAAGGTGAGCGGGTCTACATCCTGCGGCGTCATCGTCTGTGT TTTTATTCTGTTCTGGATTGTCGTACGTTGAAGGGCTGTTCGATGTAAGC AAAAAGTAAGTTTGTACGGACTACGGACTGCAAGCGCTATCCTTGCGGTA TGAGCAACGGTGGCTTGCGCCGATTCAATGCACAATCATGTCAGGAGCAG TGGTTATATAGACAAAACAGCAGTGAGCTAAGTTTGTCATAATGTCATAA TGTGTCACACCAAGTTCATCAGTTGCTCCGTGAGGTGGAATAACGCACCT TACGCAGATGACCGACCAAGGAACTCTCAGGAGAAGATACGTAGACAGCG TCAGTCAATAGCGACTTGTCTTGGGAGCATGTGCGATATGATGTCTGTCA CATCAACAATCGATCCGTCTCTACTCAGTACCTGGTGTATCACCCGTACC GGCCCAACTGACGCTAACGCCTTCCACGTGGTCACAGACCATGTCTGGAA ATCTGGAAATCATTTCATTCATTTCTGGCCCCAATGACTAACCTGACGCT GAAATAACGACCATAAATTATCAGTCTATCGTTTTCTTCGACTCACAAAG AAGCGTGGGAATCAAACTCTGCGGCACTGCTGTTTACAACAAGGTTAACG TTATTGAATGGTACATGCTTGTTTGTGTACTCGGAGTGTGTCTTGTTCGG TTGTATGCACAGCAGTTGGCGATAACGAGCGGCTGCCCTTTGTGTATTTC ACGTAATTTTTCTCGTCTCTCGTGCATTTGAGCCATCACCTTTGTTTGTG TGTACTCGGCAGGATGCAGATCTCCGAGATCCCCCGGGTGATTACGCAGA TAGATATGATGGGTGTGATGGACTTGACGCGCTAGGCTCTTCTTTCCTGC CCATCGTTCATACAAGGAACTTGGGTCCATCCTTTTCGCAGCAATATTCT CGACGAAAGCCCGCGAGTGTGATAACGCAGGATTATCACACTCGCGGGCT TTCGCCGATAATACTGCTGCGAAAAGGATGGACCCAATTCCTTGTATGAA CGAGTGAGAGAGAGATGGGCAGGAAGGAAGAGCCTAGCGCGTCAAGTCCA TCACACCCATCATATCTATCTCCGTAACCCCCCCCCCCCCGGAGATCTCG GTGATCTGTGCATCCTGCCGAGGACACACACGAGCATTTTTTCAATGTAT TTTCATGCAAATGGCATGTGATTACGTTTATAGCATCGACCGCACTTGCG GGCTGACCAAAAGTGTTCAGTGCGGCTAAAACCACAAGATGCTTCTAAAG GCCATGATCTGGGCCCCCATCAGGCGGGAATACGGGGGAGGCTAGACTAC TCCCTGGATTGAATACGGAAACGGTCGAAGACGAAGAAGAGATGCACATG TGTACGACGTCTCTATTTTCTACTCGTATTCTTTCTGGCTCCGTCCATGT ACTGCTGTTGCTGGTTCTACCAACCTCCTATTATAGCTCTGTTTTTGTTC TGTTCCCGAGCAACTGTTGTTACTCCGGCGTTTGTTGCGTGAAACATCAG CTGGGCCGAAACTTGTACTTTGTTCGAACCCCTCTCCTTGTTCTTCATTT TTGCTTCCATCACCCTCTCCTCTTTCGTGACTACCATTTTCCTCCTCCGT GCCATATTGTAGTCATCCTCCTTTTCACCAGCACAATTTTCTCTTCCACA TCCCTGCAAAGCGCTGTTGTTTCTAGACGTGGTGGAGCTAACGACAGTGT GCCGAATACACCACAGCAGCGAGCGTGCGCCGACTATCATGCCGGCATTG ATGTATGTACGCCCGTTCGTTTCCGACTCCAAGCGGTTTGTTTGCAAGTT CCAATGGGGGCATTGCTCCCGTCCACCGCCCCTCTCGCCACTCGACAACA GGGCCAAGGAAAACACCGAGGGCGAGCCCCCCGTCCGCCGCCGGCGCCTC CCCCGGGCGGGTATCGCATCCTAGTACTCGCGGGGATCCCGGGCAGCGGA AAATCCACTTTGGCTTCATTCCTTGAAGACATGGGTTGGTGCGTTTGCTG TTTACTTGGAGGAGTTCGATGGAGAGATTGAGGGGGCACGACGGGTTTCC TTTCATCTTCTCTGTGACTACGAGGGAACATATATAGCGCGCACCCGGGA CGGAAAGCCACAACCTGCCGCTCCCACTACCACATGTACCTGTCATACGA TAGTCGAGCCATGTCCCGTGCCCCGACCCCCCACAGGGAGGATGGCTTGG TCATGGTCAAGGCTAAGGGTTCGAGCCCCGCGCCGTATTCGGTTGTGTGT TCAAGGAAGCGTTTGCGTGGCGATCGGGGAGGGGTTCTCTCCACGTGTTT GTGTGTACCAAAAATCGGCGAGACCTATCGCCGTGCCCCGCTTCCATAGT TCACAGTCGAGCTCGCTGTTACCGCCCGCGCGCAACGTCAATGAAACGTG GATTGTTTACGACAGGACCGTAGTGAACCAGGACACTCTCGGGTCGCGAG AAAAGTGCAGGCGCAGAGCTCAGCAGGTCCTGGAGAAGGGGGGGCGAGTC CTCATTGACAGGTGCGGTTCCACTTTGTTTTGGGTAAAAGTTGTGCCAAG GACTCAGAGTGGAGCCGTGGTTTGTGACAGCACCTTAAACGTTCAGTTAT TTTTTTGGAAACAGCTGGACCGTTGGTGCTTGTGCTGACTGTTAAACCCG AGCGCCTGTCTCGATTGTTCAAATTTTGAAATTCGTGCGGATCAAAGCCG GCCAGCCCCCGGGGCCATAATCTGCCGTATTTTTGCTGTTGCTCGTTGTG CTGTTTGTTGGCCTTGTTTCGTTTTTAACGAAACTACAATCCTCGGTGAC GTTAAAAAACAAGGTGCAACTTCGACCAATCGCAGCGCGTGACCTGGCTT GACTTGGCCGTCTCCATCTCCCTGCACAAGGATGCGTGCATCGCGGTGTG GCTGGACATCCCCATCGGTGAGAGGGCACCTTCCTCTGTCCGTTGGGCGC CTCGCGGGTCCCACAACAAGTCGCATTCCAATTACTTGGTACTTCGACCT GTAGGACTCGTTTCCTTGGTCACAGCGGTCAATCCTTCCAAACAAATACT CAGCGACCAGCCTAAAATCGTGCCTTTAGTAGTACGAACACCATCATAAG GTACTTCATGAGAACCGCTTCCCTATCCCTGCCCTCCCGCCTGCCCGACC GTGCAGACGTTTGCCAGGGCAGGGTTCAGAGCAGGGTCGGCCACCCCACT CTCGGAGCCGGGCTCGCTTCAGCGGGCATTGTGAAACGAGTTGCAAGGGA TTTCCGTCCTCCACACCGCAAGGAGGGTTTCCACACCGTGCTGCGGTGCC AAGGCGACCAAGACTTGTCCGAGGCAGTCGCCCTCTTGTCTCTTACCGCA GGCTCGGATGGGGCGCTTGGAACGAAGCGAGCGCCCGCCCCACCGGCGAC TGCAGCCGGGAATGATCGAGTTCGTGGAGATTTCGGTGGTGACATTGGCT GGTGGCGCAGCGTCGACAGTGTGAGGATGTTTCCGGACCAGTCTCTGGCG GCGGCGGCGGAAGGATCACAGTGGCCCATCAATTCTTGTCCGCCAGGAGG AGAAGGCACGGTTGCAACAGGTCCTGCTGTGCATCATGCTGTAGAAACCT TCTTCCCAGTTGAGAAGGGCGCTACGGCGGCGGAGATGGCCGCAAAACTG CCTGGAGCCGCACCGGGGCAAGGGGGCGAGACGTATCACACGCCAGCCGC AGCAGATGCTCCGATGCCTCGACCAGAGGACGATGGCGGGCCGGTGTTGG CATGGGTAGGACAGCAGCAGGTCGGAGGTGGCAGTGCCACTGGCCCTGTG GCATGGACGAGAGATGCCGTAGGCGACAACAGGCGGACTGCCGCACATGA CTCGACTAGCTATCCGTCCTTGCCCAGCGCCATGAACGGGAACAACAGTG GCCGATTCGTAGGCAGCCTTCAGAAACAATCGCCACATCCGCCGACACAA AGAGGCTACAAGTCGAGCAGTCTCAACTCGATTGCAAGACTAACCCCACA GTCGCAAGCAGAGGCTCCTGCATCGGTGCCAGTAAAACCAAAGACGAGGT TGCTAACGCCTGCAGAGATTTCTGCGAGTTTTTCGGACTTCCAGGCCCCG CCACGGGTGCTTGCGCCTGAAGACGTGGGCGTGGCCGCGTCGACCCGAAC CAATCGCTTGGGGACGGGGCCAGCAGCGGCAGCAGGGGCGAAGCAAGATA AGGACCATTCGCACGCTCAACCGGCCGTGCTTCCCCTAGGACCGAACAGC CTTGAAGAATGGACTTTCCGCTCCACTCTCCCCATCCGAGGAAACGAGGA GGTTGGCAGCACGTGTAATAGCTCGTATCGATCGGAAGACGCAGCACCCG CAGATGGGGGGCTGGCGTACGATCATCGCGAGCGTGTCACGGCCGAAGCA GGGGATGGCGACGACCAAACAGACGGAGAGGAAGGCGATCTCGACGTCAG CGACGGGGAAGCTTTTTTCGTGCTGGAAGATATGTTCGGAGGCCTGCTGC CACCGGAAACCCTGGAGAATTTGTTCGTGGAGTCGGGAAAATCCCTTGAA AAGGTTAGGCAAGAGACGTCCTGGCATGTGACGGCAGATGGCGAGTGTCA CATTCATGTACAAATATTGTTGCATTCTCCTATGGTTGTATTCCCCGCCA CCCCTTTGTCTTAGCCCTCAACAAGCTGCTGCGTTCTCTTCAACGACACC TAAGGTGCACCGCAACGATGTGTATCTTCTGTTGCATCGGTTCGTCTACC CCCGATGGCTCTAACCAGGCCGTCAAAGAGGGATTCAAGGTCTGCGAGGG CTTATGGGGCCGGGGAGAAGTCATAACCTTCCCGGACAGCCCGTCGTCAG ACGGAACGACGACAGACGACTTCCTGACTCCGAGCACCAGCGCCGGCACC GACGTTAGCACCAACGAAACCTGTTCCGAGTCTTGGGAGGACGAGACCCA TGGAAACTTCGCGGACGTATCACACTGGACGCACAAGCAGGTACTGGAAC CAAACCCTCTGTCGAAGAACTAGGTGGTCACTTCAGTCTGCATCGCGACG GGGCTAATTCCTGCCATGGCCATTCTCCAAGCCTTGTCCCGTTTGTTTGG CAACCTTAAAAAGTGGCATAATCCCCCCTGGCTTACACACGAGCAGATAT TATGTTTTGAGCCCTAATAGTGGCACACACGATCTGATGTTCTTTGTTTG CCTCGCCTTTCCAAACCTCGCAATTCGCCCCCCTTACACGTGGCCACCCC GCTCTTGTGCGTGGCTACAGGTTGATACGTTGACTGAGCTCTGCTTGGCT TTCGAAGCAACAATCTCGCGTGAGACTATCATCGCGGCTCTCACGGCTTC CGACCACGACGCGACGTCTGCTGCGCAGCTACTCTTAGACCCGGGGCCTG CAAACTCAAGGGAAAGGCGTGAGGGAAGGCGAAGCCGTCTATATAGAGGG GTTGCGCAGCGCGAACGTAAAGCGCGCCCTCTCCGGTCTGACGGTAGCTT GCCGACCGCCACATTGCTGGGCGCGACATGTGGCGTTGATCACAAAGCGG GAGCTCTGGGCGGGAGGGGTTGGGAGGAAGAGGAGGAGGATGCCGAGGGA GAGGAGGAGGAGGAAATGGACGAGGGGCTATCCTCCGAAGAGTATCGCAC TCGTGCGAACGCGGCGGCCGAGGAGATGAAAGCTTGGTTTCAGAAGGCTG CGGAGGCGTTCACGAGAGGGGGGCGGTGAGCTATTTATCGCAATCTCCAC AAAGTTTTTTCGTTGATTCCCCGATATCCTTCGAAGCTCTTTAGATACAG GCGGGGCGGAACCACCGGCATAGTGCGGAGTTATACGTCTCATGCCATGC GTCCCAGAAGCGTCGACTGGCAAGTGCTGGTTGATTTTCTAGGTTTTTGT GCTTTACTCTGTTCATGAACTAAATCTTGCGTATCACACCCACTAGAGTT CGCCTTGAATGATGGTTACATCCCGTTTTTTCACAACCTTACGGTAAATA TAGGGATTGCCAGAACCTGTCAACGGGGTCACAACGAACCACACCGTATG GTCCAGCTCCCGGAGAAATATGTTTTGGGATCCAAATGACGCCACCCGGT TATGTTTTACATTCCTCGATTACAGAGTACCCAAAACGCCAATTTTGTAC TCAGCTGTGAAATTCGTTAGTTTCGACCAAGAATATTCGCATCCTGCCAA CCGCGTTGATTTTCGTCTTATCCTGGTCCCGTGGTGATCGTTCCTGCCGT TAGAAATGGAGGCGCGGCAGCAGCTGATCCTTCGAGGATTGGGCAGCGCT GGAAGAAGAGTATGGAGACTGCCAACCTGCGAGCTGCCCGGGAAGCGTTC CGAGAGAGAAACCCGTTAATCAGGGTGGGACATACCCATGACGGCGTCTC GGTACTCAAGGTAATTGTTTCCCCTAATCTCCACCCACCCACATCATTTG TACCTTCAATCCATGAAGGAAGAACCATGCGTTGTTTAGGCCACTATCAA GTCGAAACGCTTCCATCATCCGCGGGGCTCCGTGATGGTATTTTGGGCTT GAGAAGTACCCAGTTTGTTCTGTTCTGCCCAACCCTCTGCTGGGAGTCCC CTGCAAAGCATCCTCTGCCAGCATAGCGTTGGCCTGTTGTCTCCACCCTC GAGACCGTGCTGCACCAAGTTTCGTGCTCGTGCACGGTGTTCGGCACGAA ATGACCGCCCACACCGGCGAGAGCGAGAAAGGCTTCCGATCAACTAGCCT CATATGTAGTGACCACAATGGTAAGCAGCCAGAATCGGCTGCAGGGAGAG GTCTTGTTGTTGTAAATTTAAACGAGCGTGGCGCTTAGATCAGAATCATA CCAAGCGGCAAGTAATTCGGACGCCTAGCTTGGTTCGCGCACCAAGACCT ACACACCTTGACGGTTTCTACTCTGACGACGGCGTGGCTTTGACACGAAT CTAGCTGATGTCTATTAGGGATTTCTTCCAACTATTGAGCCTGCACCAAC GAAAAGGACTTGGCATGTAGAAGAGTGGCGAGGCCTTGGATTGATGCCCA AAGTAAGTTCTTCTGTGGGAAGTCCCTGACTCGTTTAATCCCGTGGGGGC TAACTTTTCACATACAAGTACACTTGCCGTGCATTTCTCACCAAAAGTCT CAGTGTGAGAGAAAATCCTTGTCTTTGAGTCCATTATTTACCCCCCCGCG GCCCGATCGTGACCCTCATGGGAACACATGCGTGTTGGACCAGGTGCTGA GACTTCCGGAGCCATCCCAGTGCTCTACCCTCGGCCAACTGTCAGTAGAC TTGCATCTGCTGCGCAGAGCAGAGGCCCTGAACGTCCTCGAAACAGTTCT GCACGCCATCCGACGGAGAGCGGGCGAGCACACCGGGGCCCTCTACAATC AACCTAGGGCTCCCAAGCCATCCCTTCAACTCCAAGACCATCCCGACGTA GTCGCTGCTGCGGCTGGACATGTAGGTCCTGGTGGCCAAACGGCAGCACC CTCGGCGAGTGCTTCACACACGCCGCCTGCCGCACAAGGAGAAGGCCTCC AACATGATCGTGTGATCCACGTGCAGAAATTTGCGTCGCTCGAGGTGGTC GTAGGGAGAGGTGCCCACAGCGTGGCCGGTGTTCCCCGTCTGAGGCCGTG CGTAGCGGGTTACTTGGCGGGGAAAGGGTTCCGGGCGGAAGCGGTAGAAG GGGACAAGGGGAAAGGGGTTGTCGTAGTGAGGCTTCGGTGAGCTGTGCCC TCCTTGTTCCTAAAAGTGGCGCTGTTATGTGCTTGGACTGGATGGAAATG CGTTTTATGTCTTGTGTTGGTACCGTGCTTCGGAATCTTGGTCTTGTGAA TATCTTCGGGGGGGTATGCAACTACTTGTTGTACGGTCAAGAGCTCCTGA TGTAGTAACAAAAGTCTTGGTGAGATTCCAGAATGCCCCCACCTAAGAAC CTCTTGTTTTGTCCGAGAATCGTTGTTGTTTCCTCTGTGGGGTAACCCAA CATCGACTACCATAAAGTTTTCAGTATAGGATTCTTAACTGAGCATATGT TCTTTAGGTCAAGTGATTCAACGTGTCTCGTTTTGAGCCTGAGTTCCGTA GCTTCCAGGTCTGCACGCTGTGGTTCGCACTGTCGACCTGTCAACCACAC TAGATGGAGTAGTTCAGACCCCCAGTGATCCCAGTGATAGGAGGGCGATC TTGAAAGCATTAAGTGCCTCGTCTGACAAGGCGTCAACATTGCTCTATCT ATTCGACCCTTTTCTCCTGGCCGAGTGAACAGGTTGGACGTTAGCTTCTG CAAATAATATTTCTTGAGGCGAATTGCGTTGTGTAACCTATGGATGGAAT AAATAGTGATGGTGGGTCGGCGTTGCCGGCAAGTGGGTGTGGTCTTGGGC GGGTGATAGCATGTGTACCTGGTG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig137:880..9753-

>mRNA_E-fasciculatus_F_contig137.2734.1 ID=mRNA_E-fasciculatus_F_contig137.2734.1|Name=mRNA_E-fasciculatus_F_contig137.2734.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=6222bp|location=Sequence derived from alignment at E-fasciculatus_F_contig137:880..9753- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTGGCAATCGAATGGCAGGGCGCCCAGGGGTAAATCGAAGATGTGGCA
ATCGAATGGCAGGGCGCCCAGGGGTAAATCGAAGGGCCAAGGAAAACACC
GAGGGCGAGCCCCCCGTCCGCCGCCGGCGCCTCCCCCGGGCGGGTATCGC
ATCCTAGTACTCGCGGGGATCCCGGGCAGCGGAAAATCCACTTTGGCTTC
ATTCCTTGAAGACATGGGTTGGTGCGTTTGCTGGCCAAGGAAAACACCGA
GGGCGAGCCCCCCGTCCGCCGCCGGCGCCTCCCCCGGGCGGGTATCGCAT
CCTAGTACTCGCGGGGATCCCGGGCAGCGGAAAATCCACTTTGGCTTCAT
TCCTTGAAGACATGGGTTGGTGCGTTTGCTTGAACCAGGACACTCTCGGG
TCGCGAGAAAAGTGCAGGCGCAGAGCTCAGCAGGTCCTGGAGAAGGGGGG
GCGAGTCCTCATTGACAGTGAACCAGGACACTCTCGGGTCGCGAGAAAAG
TGCAGGCGCAGAGCTCAGCAGGTCCTGGAGAAGGGGGGGCGAGTCCTCAT
TGACAGGTGCAACTTCGACCAATCGCAGCGCGTGACCTGGCTTGACTTGG
CCGTCTCCATCTCCCTGCACAAGGATGCGTGCATCGCGGTGTGGCTGGAC
ATCCCCATCGGTGCAACTTCGACCAATCGCAGCGCGTGACCTGGCTTGAC
TTGGCCGTCTCCATCTCCCTGCACAAGGATGCGTGCATCGCGGTGTGGCT
GGACATCCCCATCGACGTTTGCCAGGGCAGGGTTCAGAGCAGGGTCGGCC
ACCCCACTCTCGGAGCCGGGCTCGCTTCAGCGGGCATTGTGAAACGAGTT
GCAAGGGATTTCCGTCCTCCACACCGCAAGGAGGGTTTCCACACCGTGCT
GCGGTGCCAAGGCGACCAAGACTTGTCCGAGGCAGTCGCCCTCTTGTCTC
TTACCGCAGGCTCGGATGGGGCGCTTGGAACGAAGCGAGCGCCCGCCCCA
CCGGCGACTGCAGCCGGGAATGATCGAGTTCGTGGAGATTTCGGTGGTGA
CATTGGCTGGTGGCGCAGCGTCGACAGTGTGAGGATGTTTCCGGACCAGT
CTCTGGCGGCGGCGGCGGAAGGATCACAGTGGCCCATCAATTCTTGTCCG
CCAGGAGGAGAAGGCACGGTTGCAACAGGTCCTGCTGTGCATCATGCTGT
AGAAACCTTCTTCCCAGTTGAGAAGGGCGCTACGGCGGCGGAGATGGCCG
CAAAACTGCCTGGAGCCGCACCGGGGCAAGGGGGCGAGACGTATCACACG
CCAGCCGCAGCAGATGCTCCGATGCCTCGACCAGAGGACGATGGCGGGCC
GGTGTTGGCATGGGTAGGACAGCAGCAGGTCGGAGGTGGCAGTGCCACTG
GCCCTGTGGCATGGACGAGAGATGCCGTAGGCGACAACAGGCGGACTGCC
GCACATGACTCGACTAGCTATCCGTCCTTGCCCAGCGCCATGAACGGGAA
CAACAGTGGCCGATTCGTAGGCAGCCTTCAGAAACAATCGCCACATCCGC
CGACACAAAGAGGCTACAAGTCGAGCAGTCTCAACTCGATTGCAAGACTA
ACCCCACAGTCGCAAGCAGAGGCTCCTGCATCGGTGCCAGTAAAACCAAA
GACGAGGTTGCTAACGCCTGCAGAGATTTCTGCGAGTTTTTCGGACTTCC
AGGCCCCGCCACGGGTGCTTGCGCCTGAAGACGTGGGCGTGGCCGCGTCG
ACCCGAACCAATCGCTTGGGGACGGGGCCAGCAGCGGCAGCAGGGGCGAA
GCAAGATAAGGACCATTCGCACGCTCAACCGGCCGTGCTTCCCCTAGGAC
CGAACAGCCTTGAAGAATGGACTTTCCGCTCCACTCTCCCCATCCGAGGA
AACGAGGAGGTTGGCAGCACGTGTAATAGCTCGTATCGATCGGAAGACGC
AGCACCCGCAGATGGGGGGCTGGCGTACGATCATCGCGAGCGTGTCACGG
CCGAAGCAGGGGATGGCGACGACCAAACAGACGGAGAGGAAGGCGATCTC
GACGTCAGCGACGGGGAAGCTTTTTTCGTGCTGGAAGATATGTTCGGAGG
CCTGCTGCCACCGGAAACCCTGGAGAATTTGTTCGTGGAGTCGGGAAAAT
CCCTTGAAAAGACGTTTGCCAGGGCAGGGTTCAGAGCAGGGTCGGCCACC
CCACTCTCGGAGCCGGGCTCGCTTCAGCGGGCATTGTGAAACGAGTTGCA
AGGGATTTCCGTCCTCCACACCGCAAGGAGGGTTTCCACACCGTGCTGCG
GTGCCAAGGCGACCAAGACTTGTCCGAGGCAGTCGCCCTCTTGTCTCTTA
CCGCAGGCTCGGATGGGGCGCTTGGAACGAAGCGAGCGCCCGCCCCACCG
GCGACTGCAGCCGGGAATGATCGAGTTCGTGGAGATTTCGGTGGTGACAT
TGGCTGGTGGCGCAGCGTCGACAGTGTGAGGATGTTTCCGGACCAGTCTC
TGGCGGCGGCGGCGGAAGGATCACAGTGGCCCATCAATTCTTGTCCGCCA
GGAGGAGAAGGCACGGTTGCAACAGGTCCTGCTGTGCATCATGCTGTAGA
AACCTTCTTCCCAGTTGAGAAGGGCGCTACGGCGGCGGAGATGGCCGCAA
AACTGCCTGGAGCCGCACCGGGGCAAGGGGGCGAGACGTATCACACGCCA
GCCGCAGCAGATGCTCCGATGCCTCGACCAGAGGACGATGGCGGGCCGGT
GTTGGCATGGGTAGGACAGCAGCAGGTCGGAGGTGGCAGTGCCACTGGCC
CTGTGGCATGGACGAGAGATGCCGTAGGCGACAACAGGCGGACTGCCGCA
CATGACTCGACTAGCTATCCGTCCTTGCCCAGCGCCATGAACGGGAACAA
CAGTGGCCGATTCGTAGGCAGCCTTCAGAAACAATCGCCACATCCGCCGA
CACAAAGAGGCTACAAGTCGAGCAGTCTCAACTCGATTGCAAGACTAACC
CCACAGTCGCAAGCAGAGGCTCCTGCATCGGTGCCAGTAAAACCAAAGAC
GAGGTTGCTAACGCCTGCAGAGATTTCTGCGAGTTTTTCGGACTTCCAGG
CCCCGCCACGGGTGCTTGCGCCTGAAGACGTGGGCGTGGCCGCGTCGACC
CGAACCAATCGCTTGGGGACGGGGCCAGCAGCGGCAGCAGGGGCGAAGCA
AGATAAGGACCATTCGCACGCTCAACCGGCCGTGCTTCCCCTAGGACCGA
ACAGCCTTGAAGAATGGACTTTCCGCTCCACTCTCCCCATCCGAGGAAAC
GAGGAGGTTGGCAGCACGTGTAATAGCTCGTATCGATCGGAAGACGCAGC
ACCCGCAGATGGGGGGCTGGCGTACGATCATCGCGAGCGTGTCACGGCCG
AAGCAGGGGATGGCGACGACCAAACAGACGGAGAGGAAGGCGATCTCGAC
GTCAGCGACGGGGAAGCTTTTTTCGTGCTGGAAGATATGTTCGGAGGCCT
GCTGCCACCGGAAACCCTGGAGAATTTGTTCGTGGAGTCGGGAAAATCCC
TTGAAAAGGCCGTCAAAGAGGGATTCAAGGTCTGCGAGGGCTTATGGGGC
CGGGGAGAAGTCATAACCTTCCCGGACAGCCCGTCGTCAGACGGAACGAC
GACAGACGACTTCCTGACTCCGAGCACCAGCGCCGGCACCGACGTTAGCA
CCAACGAAACCTGTTCCGAGTCTTGGGAGGACGAGACCCATGGAAACTTC
GCGGACGTATCACACTGGACGCACAAGCAGGCCGTCAAAGAGGGATTCAA
GGTCTGCGAGGGCTTATGGGGCCGGGGAGAAGTCATAACCTTCCCGGACA
GCCCGTCGTCAGACGGAACGACGACAGACGACTTCCTGACTCCGAGCACC
AGCGCCGGCACCGACGTTAGCACCAACGAAACCTGTTCCGAGTCTTGGGA
GGACGAGACCCATGGAAACTTCGCGGACGTATCACACTGGACGCACAAGC
AGGTTGATACGTTGACTGAGCTCTGCTTGGCTTTCGAAGCAACAATCTCG
CGTGAGACTATCATCGCGGCTCTCACGGCTTCCGACCACGACGCGACGTC
TGCTGCGCAGCTACTCTTAGACCCGGGGCCTGCAAACTCAAGGGAAAGGC
GTGAGGGAAGGCGAAGCCGTCTATATAGAGGGGTTGCGCAGCGCGAACGT
AAAGCGCGCCCTCTCCGGTCTGACGGTAGCTTGCCGACCGCCACATTGCT
GGGCGCGACATGTGGCGTTGATCACAAAGCGGGAGCTCTGGGCGGGAGGG
GTTGGGAGGAAGAGGAGGAGGATGCCGAGGGAGAGGAGGAGGAGGAAATG
GACGAGGGGCTATCCTCCGAAGAGTATCGCACTCGTGCGAACGCGGCGGC
CGAGGAGATGAAAGCTTGGTTTCAGAAGGCTGCGGAGGCGTTCACGAGAG
GGGGGCGGTTGATACGTTGACTGAGCTCTGCTTGGCTTTCGAAGCAACAA
TCTCGCGTGAGACTATCATCGCGGCTCTCACGGCTTCCGACCACGACGCG
ACGTCTGCTGCGCAGCTACTCTTAGACCCGGGGCCTGCAAACTCAAGGGA
AAGGCGTGAGGGAAGGCGAAGCCGTCTATATAGAGGGGTTGCGCAGCGCG
AACGTAAAGCGCGCCCTCTCCGGTCTGACGGTAGCTTGCCGACCGCCACA
TTGCTGGGCGCGACATGTGGCGTTGATCACAAAGCGGGAGCTCTGGGCGG
GAGGGGTTGGGAGGAAGAGGAGGAGGATGCCGAGGGAGAGGAGGAGGAGG
AAATGGACGAGGGGCTATCCTCCGAAGAGTATCGCACTCGTGCGAACGCG
GCGGCCGAGGAGATGAAAGCTTGGTTTCAGAAGGCTGCGGAGGCGTTCAC
GAGAGGGGGGCGAAATGGAGGCGCGGCAGCAGCTGATCCTTCGAGGATTG
GGCAGCGCTGGAAGAAGAGTATGGAGACTGCCAACCTGCGAGCTGCCCGG
GAAGCGTTCCGAGAGAGAAACCCGTTAATCAGGGTGGGACATACCCATGA
CGGCGTCTCGGTACTCAAGAAATGGAGGCGCGGCAGCAGCTGATCCTTCG
AGGATTGGGCAGCGCTGGAAGAAGAGTATGGAGACTGCCAACCTGCGAGC
TGCCCGGGAAGCGTTCCGAGAGAGAAACCCGTTAATCAGGGTGGGACATA
CCCATGACGGCGTCTCGGTACTCAAGGTGCTGAGACTTCCGGAGCCATCC
CAGTGCTCTACCCTCGGCCAACTGTCAGTAGACTTGCATCTGCTGCGCAG
AGCAGAGGCCCTGAACGTCCTCGAAACAGTTCTGCACGCCATCCGACGGA
GAGCGGGCGAGCACACCGGGGCCCTCTACAATCAACCTAGGGCTCCCAAG
CCATCCCTTCAACTCCAAGACCATCCCGACGTAGTCGCTGCTGCGGCTGG
ACATGTAGGTCCTGGTGGCCAAACGGCAGCACCCTCGGCGAGTGCTTCAC
ACACGCCGCCTGCCGCACAAGGAGAAGGCCTCCAACATGATCGTGTGATC
CACGTGCAGAAATTTGCGTCGCTCGAGGTGGTCGTAGGGAGAGGTGCCCA
CAGCGTGGCCGGTGTTCCCCGTCTGAGGCCGTGCGTAGCGGGTTACTTGG
CGGGGAAAGGGTTCCGGGCGGAAGCGGTAGAAGGGGACAAGGGGAAAGGG
GTTGTCGTAGTGAGGCTTCGGTGAGTGCTGAGACTTCCGGAGCCATCCCA
GTGCTCTACCCTCGGCCAACTGTCAGTAGACTTGCATCTGCTGCGCAGAG
CAGAGGCCCTGAACGTCCTCGAAACAGTTCTGCACGCCATCCGACGGAGA
GCGGGCGAGCACACCGGGGCCCTCTACAATCAACCTAGGGCTCCCAAGCC
ATCCCTTCAACTCCAAGACCATCCCGACGTAGTCGCTGCTGCGGCTGGAC
ATGTAGGTCCTGGTGGCCAAACGGCAGCACCCTCGGCGAGTGCTTCACAC
ACGCCGCCTGCCGCACAAGGAGAAGGCCTCCAACATGATCGTGTGATCCA
CGTGCAGAAATTTGCGTCGCTCGAGGTGGTCGTAGGGAGAGGTGCCCACA
GCGTGGCCGGTGTTCCCCGTCTGAGGCCGTGCGTAGCGGGTTACTTGGCG
GGGAAAGGGTTCCGGGCGGAAGCGGTAGAAGGGGACAAGGGGAAAGGGGT
TGTCGTAGTGAGGCTTCGGTGA
back to top