mRNA_E-fasciculatus_F_contig1369.2729.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1369.2729.1 vs. uniprot
Match: D7G5K6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K6_ECTSI) HSP 1 Score: 567 bits (1461), Expect = 5.820e-185 Identity = 367/498 (73.69%), Postives = 383/498 (76.91%), Query Frame = 1
Query: 4 CAIWAPELHYGVATCPGITRDNPRNEEA--GRGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AVAYVRGGLCALVAFRQRDERCDGTGAGAAAAGGKEVATGDDAHARETQGEVGERQLDQGAAPSLDESRFSWPAGDDEETGASGWSQLQLLSVGRAIETSLSEDPDLTVLEDDVGDFYFQLLTAGADAGGN-ARSGSGSYPRKRHXXXXXXXXXSRRSGPVRAVHHQDSPLPCFSGTGVVHHLPAAWP----GGDN-----GDDPTSVEDDNRLSVSGSSGEGSVTGSLAADGSXXXXXXXXXXXXXXXXSEPLQSEVGDGGGNGSAGGDVGALVDAFGRQGRADLGVEAMRRRGAGGEQELSVLDDVHACLAGGDGGGGTGRSAASSAAREIGLRTSMSKGNRWVIGRRLAGESGSGG-RSRLGHEVYATIEAPVLSVGDARAAARRVYSGVARDGVAAGDGAVAGRPSAGADRSRASEKGLERRRFLR 1455
CAIWAPELHYGVA PGITRDNPRNE+A RGSTP XXXXXX AVAYVRGGLCALVAFR+R+ RCDGTG AAGG+EVATGDDA QGEVG+ +LDQGAA DE RFSWPA DDE GA GWS+LQLLS+GRAIETSLSEDPDLTVLEDDVGDFYFQLLTAG DAGGN ARSGSG +PR+R SRRSGPVR VHHQDSPLPCFSGTG+V H PA P GG GDD EDDNRLSVSGSSGEG V G LAAD S XXXXXXXXXXXXXXX GSAGGDVG L+DAFGRQGR DLGVEAMRRRGAGGEQELSVLD+VHACL GD GGGTGRSAAS AAREIG+RTSMSKGNRWVIGRRLAGESG GG RSRLGHEVYATIEAPVLSVGDARAAA RV+SGVA DG+AAGDGAVAGR SA DRSRASEKGLERRRFLR
Sbjct: 666 CAIWAPELHYGVAERPGITRDNPRNEKAFAARGSTPPAATXXXXXXSADAGSFTGRDGNSFQRRRRRRAVAYVRGGLCALVAFRERERRCDGTGG---AAGGEEVATGDDA-----QGEVGQPRLDQGAAHGSDEPRFSWPA-DDERAGAGGWSELQLLSLGRAIETSLSEDPDLTVLEDDVGDFYFQLLTAGEDAGGNDARSGSGGHPRRRQQ--------SRRSGPVRTVHHQDSPLPCFSGTGIVRHPPAPAPAAQLGGSGLPVGAGDDSAGAEDDNRLSVSGSSGEGPVVGRLAADVSSXXXXXXXXXXXXXXXXXXXVCXXXXXX-XGSAGGDVGPLLDAFGRQGRPDLGVEAMRRRGAGGEQELSVLDEVHACLTRGD-GGGTGRSAASPAAREIGIRTSMSKGNRWVIGRRLAGESGGGGGRSRLGHEVYATIEAPVLSVGDARAAASRVFSGVACDGLAAGDGAVAGRQSAEPDRSRASEKGLERRRFLR 1144
BLAST of mRNA_E-fasciculatus_F_contig1369.2729.1 vs. uniprot
Match: A0A6H5J820_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J820_9PHAE) HSP 1 Score: 409 bits (1050), Expect = 6.220e-134 Identity = 257/337 (76.26%), Postives = 275/337 (81.60%), Query Frame = 1
Query: 466 LLSVGRAIETSLSEDPDLTVLEDDVGDFYFQLLTAGADAGGNARSGSGSYPRKRHXXXXXXXXXSRRSGPVRAVHHQDSPLPCFSGTGVVHH--LPAAWPGGDN-----GDDPTSVEDDNRLSVSGSSGEGSVTGSLAADGSXXXXXXXXXXXXXXXXSEPLQSEVGDGGGNGSAGGDVGALVDAFGRQGRADLGVEAMRRRGAGGEQELSVLDDVHACLAGGDGGGGTGRSAASSAAREIGLRTSMSKGNRWVIGRRLAGESGSGGRSRLGHEVYATIEAPVLSVGDARAAARRVYSGVARDGVAAGDGAVAGRPSAGADRSRASEKGLERRRFLR 1455
LLS+GRAIETSLSEDPDLTVLEDDVGDFYFQLLTAG DAGGNA SG G +PR+R S R+GPVRA+HHQDSPLPCFSGTG+V H PAA GG GDD E+D RLSV GSSGEG + G LAAD S XXXXXXXXXXXXXXX GSAGGDVG L+DAFGRQGRADLGVEAMRRRGAGGEQELSVLD++HACL G+ GGGTGRSAASSAAREIG+RTSMSKGNRWVIGRRLAGESGSGGRSRLGHE+YATIEAPVLSVGDARAAA RV+SGVA DG+ AGDGAVAG+ SAG DRSRASE+GLERRRFLR
Sbjct: 25 LLSLGRAIETSLSEDPDLTVLEDDVGDFYFQLLTAGEDAGGNAWSGGGVHPRRRQQ--------SPRTGPVRAIHHQDSPLPCFSGTGIVRHPPAPAAQLGGSGLPVGVGDDSAGAENDKRLSVWGSSGEGPIAGRLAADVSGXXXXXXXXXXXXXXXXXXXXXXXXXX--XGSAGGDVGPLMDAFGRQGRADLGVEAMRRRGAGGEQELSVLDEIHACLTRGE-GGGTGRSAASSAAREIGIRTSMSKGNRWVIGRRLAGESGSGGRSRLGHELYATIEAPVLSVGDARAAASRVFSGVACDGLPAGDGAVAGQ-SAGPDRSRASERGLERRRFLR 349 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1369.2729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1369.2729.1 >prot_E-fasciculatus_F_contig1369.2729.1 ID=prot_E-fasciculatus_F_contig1369.2729.1|Name=mRNA_E-fasciculatus_F_contig1369.2729.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=448bp MLAAAAAADAGSFSGRDGTPPPRRRRRRAVAYVRGGLCALVAFRQRDERCback to top mRNA from alignment at E-fasciculatus_F_contig1369:1336..3919+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1369.2729.1 ID=mRNA_E-fasciculatus_F_contig1369.2729.1|Name=mRNA_E-fasciculatus_F_contig1369.2729.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2584bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1369:1336..3919+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1369:1336..3919+ >mRNA_E-fasciculatus_F_contig1369.2729.1 ID=mRNA_E-fasciculatus_F_contig1369.2729.1|Name=mRNA_E-fasciculatus_F_contig1369.2729.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2688bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1369:1336..3919+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |