mRNA_E-fasciculatus_F_contig1368.2724.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-fasciculatus_F_contig1368.2724.1
Unique Name	mRNA_E-fasciculatus_F_contig1368.2724.1
Type	mRNA
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)

Homology

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BLAST of mRNA_E-fasciculatus_F_contig1368.2724.1 vs. uniprot
Match: D7FW18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW18_ECTSI)

HSP 1 Score: 471 bits (1211), Expect = 1.250e-161
Identity = 226/265 (85.28%), Postives = 241/265 (90.94%), Query Frame = 2

Query:  443 DSSAVPDALEAFLEPYDAIMREFNSRSVGNWAHAKSGGLKVSSAWGPDVFDYSTRGGNFITAPHKLDHDQEQLEYLVAKGRLPPEFQRIAEAYGTVRDLLEAGLSEARKSQLEEGLGQGYRGQTFGLGTSDFARLRGTYNSVIHVPAGPADGDLGGGYHPTGFRRALNPNLDWRAIEDEYLSQELPVLWFDDFLLPEALQGVLEFCREATVFFDIKRGYLGAYFNDGLTSPWLVQIAHELQERLPQVLKGMTLSNLWAYKFDSDT 1237
            +++ VPDALE FLEPY+AI+REFNSR+  NWA A S GLKVSS WG DVFD S RGGNF TAPHKLDHD+EQLEYLVAKGRLPPEFQR+AE YGTV DL+EA LS+ARK QL+E LGQG R  T+GLGTSDF RLRGTYNSVIHVP GPADGDLGGGYHPTGFRRALNPNLDWRAIEDEYLSQELP+LWFD FLLPEALQGVL+FCREATVFFDIK GYLGAYFNDGLTSPWLVQIAHELQERLPQVL+GMTLSNLWAYKFDSDT
Sbjct:   35 ENNTVPDALEVFLEPYEAIVREFNSRAASNWARAASEGLKVSSGWGADVFDPSARGGNFATAPHKLDHDREQLEYLVAKGRLPPEFQRLAEEYGTVGDLVEASLSQARKGQLKE-LGQGLRALTYGLGTSDFGRLRGTYNSVIHVPKGPADGDLGGGYHPTGFRRALNPNLDWRAIEDEYLSQELPLLWFDGFLLPEALQGVLDFCREATVFFDIKPGYLGAYFNDGLTSPWLVQIAHELQERLPQVLEGMTLSNLWAYKFDSDT 298

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BLAST of mRNA_E-fasciculatus_F_contig1368.2724.1 vs. uniprot
Match: A0A8J2X3T1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3T1_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.040e-31
Identity = 91/270 (33.70%), Postives = 139/270 (51.48%), Query Frame = 2

Query:  452 AVPDALEAFLEPYDAIMREFNSRSVGNWAHAKSGGLKVSSAWGPDVFDYS----TRGGNFITAPHKLDHDQEQLEYLVAKGRLPPEFQRIAEAYGTVRDLLEAGLSEARKSQLEEGLGQGYRGQTFGLGTSDFARLRGTYNSVIHVPAGPADGDLGGGYHPTGFRRALNPNL--DWRAIEDEYLSQ----ELPVLWFDDFLLPEALQGVLEFCREATVFFDIKRGYLGAYFNDGLTSPWLVQIAHELQERLPQVLKGMTLSNLWAYKFDS 1231
            A  ++ EA+LE  +A +       +G  AHA++       A   +   Y      RG  FI A  KL+HD EQL +L+ +G+LPP F+ +A+AY T+      G+  A++SQ        +  Q   L T+  A L G +N+++++P               G +RAL      +   +E  YL+       P  + D FL  EAL+ + E+C +ATV+FD K GYLGAYF+DG +   L+Q+  EL+  LPQ++  + L   WAYK+DS
Sbjct:   63 AANESAEAYLEHLNATVGARARIGLGE-AHAEAAARGYKLALPGETQRYPGSVHVRGNFFIAAAFKLEHDGEQLRHLMREGKLPPPFRHLADAYSTIY----RGIQRAQRSQ--------FMTQKL-LSTAQHALLFGAHNALVYLPP------------ERGVKRALGARFLREAAGLEAAYLADARADRAPAFYADGFLSDEALEELYEWCLDATVWFDAKPGYLGAYFDDGFSPKVLLQVVEELRLALPQIIGDLNLKTAWAYKYDS 306

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BLAST of mRNA_E-fasciculatus_F_contig1368.2724.1 vs. uniprot
Match: A0A2N1V5K5_9BACT (Uncharacterized protein n=1 Tax=Candidatus Melainabacteria bacterium HGW-Melainabacteria-1 TaxID=2013813 RepID=A0A2N1V5K5_9BACT)

HSP 1 Score: 117 bits (293), Expect = 3.570e-25
Identity = 72/205 (35.12%), Postives = 107/205 (52.20%), Query Frame = 2

Query:  623 TAPHKLDHDQEQLEYLVAKGRLPPEFQRIAEAYGTVRDLLEAGLSEARKSQLEEGLGQGYRGQTFGLGTSDFARLRGTYNSVIHVPAGPADGDLGGGYHPTGFRRALNPNLDWRAIEDEYLSQELPVLWFDDFLLPEALQGVLEFCREATVFFDIKR--GYLGAYFNDGLTSPWLVQIAHELQERLPQVLKGMTLSNLWAYKFDS 1231
            T+  KL HD +QLE+L+    LP  F R+ +AY            E  +   E+G           L +S  A ++  Y   +++   PA         P   R  LNP    + IE +YL+ +   +  DD LLP+A + +L FC+++T++ D  R  GYLGAY +DG +   L QIA EL++ LPQV KG+ L ++WAYK+DS
Sbjct:  209 TSLTKLQHDAQQLEFLLQGSYLPERFGRLLQAY-----------QELLRQHSEQG-------PALSLSSSQMAPIQLIYGRNVYISPVPA--------FP---REVLNPQHHPKQIEADYLNSDPACVIVDDLLLPDACEALLHFCQKSTIWHDDSRPGGYLGAYLDDGFSCDLLYQIALELRDALPQVFKGLPLKHMWAYKYDS 384

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BLAST of mRNA_E-fasciculatus_F_contig1368.2724.1 vs. uniprot
Match: UPI0018E573A1 (tetratricopeptide repeat protein n=1 Tax=Cyanothece sp. BG0011 TaxID=2082950 RepID=UPI0018E573A1)

HSP 1 Score: 116 bits (291), Expect = 1.670e-24
Identity = 72/202 (35.64%), Postives = 107/202 (52.97%), Query Frame = 2

Query:  629 PHKLDHDQEQLEYLVAKGRLPPEFQRIAEAYGTVRDLLEAGLSEARKSQLEEGLGQGYRGQTFGLGTSDFARLRGTYNSVIHVPAGPADGDLGGGYHPTGFRRALNPNLDWRAIEDEYLSQELPVLWFDDFLLPEALQGVLEFCREATVFFDIKR-GYLGAYFNDGLTSPWLVQIAHELQERLPQVLKGMTLSNLWAYKFDS 1231
            P KL     QL YL+ K ++ P F+ +   Y       +A L E      ++     Y G    L       L G Y+ +I+ P  P    L G         ALN +LD++ IED YL   +  ++FD+FL PEALQ + +FC E+T+FF  +  GY+GAY   G+ +P + QIA EL+ERLP+VL  +++ N+W Y++ S
Sbjct:  420 PFKLVDCINQLNYLIDKEKIDPSFKELVARY-------QALLPEIEAKSFDDA----YVGTL--LSPEQVKSLGGYYDKIIYYPGTPP---LRG--------PALNDSLDYKVIEDSYLGSSM--VYFDNFLTPEALQNLRQFCLESTIFFKHRASGYVGAYMTTGIANPLMFQIAEELRERLPRVLGELSVGNMWVYRYQS 595

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BLAST of mRNA_E-fasciculatus_F_contig1368.2724.1 vs. uniprot
Match: A0A545U234_9PROT (Tetratricopeptide repeat protein n=2 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545U234_9PROT)

HSP 1 Score: 114 bits (285), Expect = 5.050e-24
Identity = 70/205 (34.15%), Postives = 104/205 (50.73%), Query Frame = 2

Query:  623 TAPHKLDHDQEQLEYLVAKGRLPPEFQRIAEAYGTVRDLLEAGLSEARKSQLEEGLGQGYRGQTFGLGTSDFARLRGTYNSVIHVPAGPADGDLGGGYHPTGFRRALNPNLDWRAIEDEYLSQELPVLWFDDFLLPEALQGVLEFCREATVFF--DIKRGYLGAYFNDGLTSPWLVQIAHELQERLPQVLKGMTLSNLWAYKFDS 1231
            T+  KL HD EQL +L+  G++  +F+++   Y  V D L           +E+G      G    +   +  RL   +N +IH P  P+   L G         A+NP+LD   IE  Y      ++  DDFL P ALQ + +FC E+T+++    K GY+GA+  DG  SP L+QIA EL+   P++    TL  LW +K+DS
Sbjct:  224 TSRSKLQHDIEQLAFLLENGKVDRKFEQVLSDYRAVLDDLPV---------MEDG------GSLVAVSAENQKRLAPYFNRLIHWPQSPS---LAG--------PAVNPDLDRAEIETAYFKNAPGIVHVDDFLSPAALQEIRQFCLESTIWYRHHYKMGYVGAFMEDGFVSPLLLQIADELRNGFPRIFGAATLRKLWGFKYDS 402

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BLAST of mRNA_E-fasciculatus_F_contig1368.2724.1 vs. uniprot
Match: A0A7S1U0M9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0M9_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.280e-23
Identity = 76/223 (34.08%), Postives = 106/223 (47.53%), Query Frame = 2

Query:  557 LKVSSAWGPDVFDYSTRGGNFITAPHKLDHDQEQLEYLVAKGRLPPEFQRIAEAYGTVRDLLEAGLSEARKSQLEEGLGQGYRGQTFGLGTSDFARLRGTYNSVIHVPAGPADGDLGGGYHPTGFRRALNPNLDWRAIEDEYLSQELPVLWFDDFLLPEALQGVLEFCREATVFFDIKRGYLGAYFNDGLTSPWLVQIAHELQERLPQVLKGMTLSNLWAYKF 1225
            L++      ++     RG    T   KL+HD  QLEYLV +GRLP EF+ IA  Y       +A    AR   L+    Q           + F      YN +      P            G   AL P  D+ ++E  YL  E  VL  DDFL P ALQ + E+C EATVF+++K  ++GAYF +G   P L ++A EL+   P V+ G+ L  +W+YK+
Sbjct:  119 LRLPQVHNGEIVSEERRGNVVFTTGAKLEHDAMQLEYLVRRGRLPEEFREIAALYRYEILKFQARDPAARAFYLDLSFHQ----------NTHFLYGMQVYNPMTTKLGTP------------GHESALKPQ-DYPSLEAAYLRGE--VLAIDDFLEPWALQELYEYCLEATVFYEVKPNFVGAYFTEGFAHPLLERVALELRRAFPTVVGGLELWYVWSYKY 316

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BLAST of mRNA_E-fasciculatus_F_contig1368.2724.1 vs. uniprot
Match: A0A2S6R867_9PROT (Beta-barrel assembly-enhancing protease n=1 Tax=Alphaproteobacteria bacterium MarineAlpha10_Bin2 TaxID=2013104 RepID=A0A2S6R867_9PROT)

HSP 1 Score: 112 bits (280), Expect = 3.300e-23
Identity = 68/204 (33.33%), Postives = 99/204 (48.53%), Query Frame = 2

Query:  623 TAPHKLDHDQEQLEYLVAKGRLPPEFQRIAEAYGTVRDLLEAGLSEARKSQLEEGLGQGYRGQTFGLGTSDFARLRGTYNSVIHVPAGPADGDLGGGYHPTGFRRALNPNLDWRAIEDEYLSQELPVLWFDDFLLPEALQGVLEFCREATVFFDIKRGYLGAYFNDGLTSPWLVQIAHELQERLPQVLKGMTLSNLWAYKFDSD 1234
            +A  KL+HD +Q+ +L A+G    + Q+I   Y +VRD +   ++                 + F L  +   +L   Y+   +VPA P                AL   +  R +E  Y   E  +   DD L  +AL  +  FCREAT++ D+K GYLG Y NDG   P L+QIAHEL++RLP +     L  +W+YK DSD
Sbjct:  300 SALFKLNHDIDQMRHLYARGIAGNDIQKIIGCYESVRDAMPYDMAHD---------------EIFKLSEAQRDKLNPNYDGAYYVPACPML-----------EISALGKGVGRRQVESSYFGLEPNLAVVDDLLSQDALLRLRAFCREATIWKDVKPGYLGTYLNDGFCEPLLLQIAHELRQRLPAIFADHPLIEMWSYKCDSD 477

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BLAST of mRNA_E-fasciculatus_F_contig1368.2724.1 vs. uniprot
Match: A0A5E8ETA7_9HYPH (Tetratricopeptide repeat protein n=6 Tax=unclassified Mesorhizobium TaxID=325217 RepID=A0A5E8ETA7_9HYPH)

HSP 1 Score: 109 bits (273), Expect = 1.600e-22
Identity = 84/268 (31.34%), Postives = 122/268 (45.52%), Query Frame = 2

Query:  458 PDALEAFLEPYDAIMREFNSRSVGNWAHAKSGGLKVSSAW-----GPDVFDYSTRGGNFITAPHKLDHDQEQLEYLVAKGRLPPEFQRIAEAYGTVRDLLEAGLSEARKSQLEEGLGQGYRGQTFGLGTSDFARLRGTYNSVIHVPAGPADGD--LGGGYHPTGFRRALNPNLDWRAIEDEYLSQELPVLWFDDFLLPEALQGVLEFCREATVFFDIKR--GYLGAYFNDGLTSPWLVQIAHELQERLPQVLKGMTLSNLWAYKFDSD 1234
            P A +A  +   A+ R+ N R        +S  L  SS W       ++ D    GG  IT+  +L+HD EQLEYL   G +       A  Y  +          AR+  +  G         F + + +     G Y   +++P+ P   D  +GGG + +    A      +  +              D+FL PEAL+ ++ FCREATV+FD KR  GYLGAY +DG      V++A EL   LP +LKG  LS LWA+K+ S+
Sbjct:  127 PFAPDAHNDLGQALKRQGNLRQAVA-CFKQSFDLGRSSRWYSKTSAANIVDPLRSGGASITSVARLEHDAEQLEYLWWIGCIDESLAGKAAIYRHI----------ARRRAVAHGFSD-----PFEMTSEEITATSGVYGRAVNIPSLPHSKDAVVGGGLNGSDVEAAFATGRSFAIV--------------DNFLSPEALETLVRFCREATVWFDCKRRGGYLGAYLHDGFAPETAVRLAEELPRLLPDLLKGHGLSQLWAFKYPSE 364

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BLAST of mRNA_E-fasciculatus_F_contig1368.2724.1 vs. uniprot
Match: A0A2S6U6N1_9PROT (TPR repeat-containing protein YrrB n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A2S6U6N1_9PROT)

HSP 1 Score: 110 bits (274), Expect = 2.330e-22
Identity = 72/210 (34.29%), Postives = 107/210 (50.95%), Query Frame = 2

Query:  611 GNFITAPHKLDHDQEQLEYLVAKGRLPPEFQRIAEAYGTVRDLLEAGLSEARKSQLEEGLGQGYRGQTFGLGTSDFARLRGTYNSVIHVPAGPADGDLGGGYHPTGFRRALNPNLDWRAIEDEYLSQELPVLWFDDFLLPEALQGVLEFCREATVFFDIKRGYL-GAYFNDGLTSPWLVQIAHELQERLPQVLKGMTLSNLWAYKFDSDT 1237
            G   T+  KL    +QLEYL+AKGR+   FQR+A+ YG V       L+E  + ++ E + +   GQ   LG+         +N  IH   GPA   +G G         +N  LD++ IE  YL+  + V   DDFL PE    + +FC E+T+FF     +L  +   +G     L QIA E++ER P VL G  L+N+W Y++ + +
Sbjct:  354 GKVSTSTFKLRDTIDQLEYLIAKGRIDSSFQRMADRYGDV-------LTEIEQMEMPEAVSKLTPGQLDRLGSF--------HNQAIHHD-GPAR--IGAG--------TINGALDFKHIEKRYLASPVSVTTLDDFLTPETFSRLRDFCLESTIFFTHTGNHLVSSRLTNGFNCDLLFQIAEEVKERFPNVLGGHELANMWVYRYSNQS 537

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BLAST of mRNA_E-fasciculatus_F_contig1368.2724.1 vs. uniprot
Match: A0A7S1I2T6_9EUGL (Hypothetical protein n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I2T6_9EUGL)

HSP 1 Score: 105 bits (263), Expect = 3.110e-22
Identity = 49/129 (37.98%), Postives = 74/129 (57.36%), Query Frame = 2

Query:  863 SVIHVPAGPADGDLGGGYH--------PTGFRRALNPNLDWRAIEDEYLSQELPVLWFDDFLLPEALQGVLEFCREATVFFDIKRGYLGAYFNDGLTSPWLVQIAHELQERLPQVLKGMTLSNLWAYKF 1225
            S + +P GP   +LG  +         P     A+N   DW  ++ +YLS    + + DDFL P A + +L F +E+T++ D+K GYLG+Y  DG +SP  +Q+AHEL+E LP +LK   L+  W YK+
Sbjct:   44 STLPLPTGPGHANLGAAHSRVVYIAPCPVLEEGAVNAGRDWGQLQTQYLSMHRGITFMDDFLKPAAAEALLAFAQESTIWHDVKNGYLGSYQQDGFSSPLFLQVAHELRELLPDILKDHELTQAWGYKY 172

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig1368.2724.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig1368.2724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FW18_ECTSI	1.250e-161	85.28	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A8J2X3T1_9STRA	1.040e-31	33.70	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A2N1V5K5_9BACT	3.570e-25	35.12	Uncharacterized protein n=1 Tax=Candidatus Melaina...	[more]
UPI0018E573A1	1.670e-24	35.64	tetratricopeptide repeat protein n=1 Tax=Cyanothec...	[more]
A0A545U234_9PROT	5.050e-24	34.15	Tetratricopeptide repeat protein n=2 Tax=Denitroba...	[more]
A0A7S1U0M9_9STRA	1.280e-23	34.08	Hypothetical protein n=2 Tax=Phaeomonas parva TaxI...	[more]
A0A2S6R867_9PROT	3.300e-23	33.33	Beta-barrel assembly-enhancing protease n=1 Tax=Al...	[more]
A0A5E8ETA7_9HYPH	1.600e-22	31.34	Tetratricopeptide repeat protein n=6 Tax=unclassif...	[more]
A0A2S6U6N1_9PROT	2.330e-22	34.29	TPR repeat-containing protein YrrB n=3 Tax=Proteob...	[more]
A0A7S1I2T6_9EUGL	3.110e-22	37.98	Hypothetical protein n=2 Tax=Eutreptiella gymnasti...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig1368	contig	E-fasciculatus_F_contig1368:396..7277 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	473.0
Seed ortholog evalue	1.4e-130
Seed eggNOG ortholog	2880.D7FW18
EggNOG OGs	2CY2I@1,2S1H1@2759
Ec32 ortholog description	conserved unknown protein
Ec32 ortholog	Ec-01_003010.1
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	signal peptide
Exons	8
Model size	1239
Cds size	1209
Stop	0
Start	1

Relationships

The following CDS feature(s) are a part of this mRNA:

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927862.9430292-UTR-E-fasciculatus_F_contig1368:7249..7277	1622927862.9430292-UTR-E-fasciculatus_F_contig1368:7249..7277	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1368 7250..7277 -
1695995728.3591123-UTR-E-fasciculatus_F_contig1368:7249..7277	1695995728.3591123-UTR-E-fasciculatus_F_contig1368:7249..7277	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1368 7250..7277 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig1368.2724.1	prot_E-fasciculatus_F_contig1368.2724.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	polypeptide	E-fasciculatus_F_contig1368 396..7249 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-fasciculatus_F_contig1368:396..7277-
coding sequence from alignment at E-fasciculatus_F_contig1368:396..7277-

protein sequence of mRNA_E-fasciculatus_F_contig1368.2724.1

>prot_E-fasciculatus_F_contig1368.2724.1 ID=prot_E-fasciculatus_F_contig1368.2724.1|Name=mRNA_E-fasciculatus_F_contig1368.2724.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=403bp
MAVPALKLLVIPWVVVRHALVALSQEDVSSYNNRASSDKLNAAQVAFTES
YYLQNIGDLRAAARGYQELARTRRGGPRWAQDVAVAKDTGSSGTGERDSR
GQITKGGGGGGGGGDSGDPGGVIGSGGGGYERGGDNGDDSSAVPDALEAF
LEPYDAIMREFNSRSVGNWAHAKSGGLKVSSAWGPDVFDYSTRGGNFITA
PHKLDHDQEQLEYLVAKGRLPPEFQRIAEAYGTVRDLLEAGLSEARKSQL
EEGLGQGYRGQTFGLGTSDFARLRGTYNSVIHVPAGPADGDLGGGYHPTG
FRRALNPNLDWRAIEDEYLSQELPVLWFDDFLLPEALQGVLEFCREATVF
FDIKRGYLGAYFNDGLTSPWLVQIAHELQERLPQVLKGMTLSNLWAYKFD
SDT

mRNA from alignment at E-fasciculatus_F_contig1368:396..7277-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-fasciculatus_F_contig1368.2724.1 ID=mRNA_E-fasciculatus_F_contig1368.2724.1|Name=mRNA_E-fasciculatus_F_contig1368.2724.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6882bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1368:396..7277- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAATCCTCTGCTGATACGTCACCTCAACATGGCAGTACCCGCCCTAAAGC
TGTTGGTCATTCCATGGGTAGTTGTTCGTCATGCTTTGGTGGCTCTTTCC
CAAGAAGATGTCAGCAGCTACAACAATCGAGCATCCAGCGGTGAGAGATT
TGAGATTTTACCCGCAGCGTATCTTGACGTATCTTCTGCAAACACGCGCG
CGCGTACTGGCGTCTGTGTGAGGAAAGGTAGCAGCCGCGGCGCCAACGTG
CTGATGTCGATAGCTCATCACCTTTGATCTCTCAGTACCGGTACCACCTG
AATGGTAAATCTCATCAACATTCATCCCAATATATGCATTGTTTTTCCTA
ATATGCATACAACACTCGAAATTTCACCCACTTCTCAGCTTCTCAGCAGA
GGCCCAAAAGAAGTCACCGTCGCTACAGTAGTGTTCAGCTCACCATGGCT
GCCACTAAAATCAACAACACACACACACACACACAGAGAGAGAGAGAGAG
AGAGAGAGAATCTTCCTTGGCGTGTCGCCTAACGCGGCAGTGACAGCCCA
TCTATTGTCTTGCTTCAAAACAATTAAACAACTGTGTGTGGAGGTCAGGA
ATATATTCAGGACGAACAGTCATGCATTTGTGTTGGCTGATCGTTAGCGG
TGGGGACTGCTCGGTCGGGTGTTCTTTCACCTTCTGTCTCTAGGAAGGTG
ATCGACTTTGAGAGTCTTTCTTCCTCTGCAGCAGCTGTAACATTCTTTCC
ACTACGGTAGAAGGTAGAACAGCGAAGAATACGTATCAGGCTGGCCGCCA
CCGGGATTGCCCTATATGGGGGACAACTACATCCGAACCGCTCCGGCAGG
CTGGATCGAGGGAACATATCGGTCTGTTCAGTTCCCCGATCATGTCAGCC
TGCGCCTGTTTGTTGTGTCGGCACGTGTGCTATGTTATCACCCTCGCGGG
CTCTTGTCGAAAGCGTTTGTGCACAGAGGATTGACTCAAGTTCTTTGATT
GACGAGTGACAAGCATGAGCAGCGGGCAAGAAGGACCTGCTGCTGCACAC
ACGTCTGCATAGACTATACCCATACCTATCATATCTGCGTACCCCCTCGG
ATATCTCGGAGATGTGTATCTCCTGCCGAGTACACACAAAAATAGCGCCC
TCCAAATACTCGCGACCATAGCGAAGTATTCATCGTGGTATCTACTATTT
ACAGAACCGGTGAAGACGGCCGGCCGGAACACACACCTGGTCGTTGTTTA
TAAACCGGGCGGTGACTGGTGCAGTCGTGGTAGATCTCGGAGACACGACT
TTCTCTGCCCTCGTTAGCGCTTCGCGACGGCCGCCCCGAAAGCGGGCCGA
ACACGGGCAAGGCCCTCGCTGCCCAGGGCTACCAGAAGGCGTGAATCTCG
CGGCGAATGGAAGGTCTACGGGGGGAGAAGCCGCAAAAAGAAGGCTCTAG
AGCCACGACCGAACTAGGATTGCCAACCCTGCAACCTCGTGAGCCCTCAG
CCCACAGGAAGTCCGTCCTTAGCTCTAGACTTAATTAACGCGGCGACGAA
TTCCTCTCGGGATTAGGTCGACGTTGCCACCCCACCGCGCTTTCGACGGT
GGCAAAGGCTGCGCTCTGCAAGCTCATGTTTAGGACAGACAGCGATACCA
AGCACGTTTACGTATTAGCAGCTGCCGAAACCCATTTTGTCGGCTGCGAT
GCACAGCCGGAGTAATAGGACTGATATGATTGGACAACTTGTATCCGTCG
AAGTAAACGAGGTTCCGTAGCAGATTGACCGAGTACTCTTTGACTGAGTA
CTCTTTGACTGAGAACTCTCGTACAGACTAGACAGGACGATAGTGGCCTT
GGTATGGCCGAGAAATGTCCGTGTGATATATCATCAGGTGAGGACAATAA
TAGTCATGAAGGCCAGCCATTTTCTTGATATCCAGGGGGGAGAAGTAAAC
ACTGGGTCTTGTAATAGCAATTAACGGGATGGCAAAGAGGCGGTCAGTCT
AACCATCCAACGCAGACAGTTTAAGTGTCCAACGATACTGCTGTTATCCG
TTGGCTGATTGCCTAGATCTCGTGGTTCTTAGGTAGACATGCACAACGGG
CCACAGGGTTACACAATGCACCGACAACTTGCTGCGATCCTCTGGAAAAC
AGCCGGGGTTACTCATCATACAGCAGCAGTGAATTTTCTTACCCCCTCGC
TGCGTGCTTTCTCTTGGTGATAAACGGTGGTGGTGGCAAAGACAAACTGA
ATGCAGCCCAAGTCGCGTTTACGGAGAGCTACTACCTGCAGAACATCGGC
GATCTGCGAGCCGCGGCGAGGGGGTACCAAGAGCTAGCTAGAACACGACG
CGGCGGCCCCCGATGGGCGCAAGATGTCGCCGTTGCCAAAGATACGGGAT
CCTCCGGGACTGGGGAGCGTGACAGCCGTGGGCAGATCACCAAAGGAGGA
GGCGGCGGCGGCGGCGGCGGCGACAGCGGCGATCCTGGTGGCGTCATTGG
TAGTGGTGGTGGTGGTTATGAACGTGGTGGGGACAACGGTGACGACAGTA
GCGCCGTGCCTGATGCGCTGGAAGCGTTTCTCGAGCCCTACGACGCCATC
ATGCGAGAGTTTAACTCTCGATCGGTGGGCAACTGGGCTCACGCCAAATC
GGGGGTGAGCCTGCTACTAGGTGTACCCGAGGCGTTGGGAAAGGCCAACG
CCAAACCACGTGCAGCATGTGTGTCGTGCGCTACATAGGTGAAAAGTCGC
TCCTCCAAGCGCCGTGAGCCTCGATCAGCGTTGTCACAGGCTGCTGTTGC
TCACGATTCCGAGGGTGAACTTTCAACCAGGACCAGTGTATCTTGTTTTG
ACTTGTTTTGACCGACTCTAGACCGCCGGTACTGTTGTTACCGACCACTG
TCTCTCTCGGAAACAACTGCTTGCTGTACGGGAGAATGTTTCCGAGTAAT
GCACGGGCGTCTCACCTGGCAGCCACGCGGGCACGCCGCCTGAAACACGT
CAGTATCGGCCTTTCCCGCGACACTCCGTGTACTACCCCCCTTTTTAGGG
CTTAAAGGTGTCAAGCGCTTGGGGACCAGACGTGTTCGACTACTCCACGC
GAGGGGGAAACTTCATTACCGCGCCTCACAAGCTGGACCACGACCAAGAG
CAGGTGCGAGGCGCTTGGCCTTGTCGTCGCGACAAGCTTAAGCTTCACAT
TCAACCTCTCTCTTCGCTAAAACCCGTTGAGATTGTTTTCTTGTCGTTGT
TTTCGTGTTGCGTCTGTTGGCCCTGCTGCCTAACCCTGACGCTTCGCGAG
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGAGGCGGCGTGCTTT
TTTAACCCCGTGGTTCTAACCCCGTTGTGGCCTAACCCTGACGCTTCGCG
AGCGGCGGCGGCGGCGATGGCGGCGGCGTGGTTTTTTAACCCCGTGGTTC
TCGCCGGGGTCGAAGTTCCGGTCTTCCTTTGGCATTTTTATACAACCCAG
CACGGACATCGGCGACATTAACTCTGTCTTGGGATGCTTCGGTTGCATAT
TAACACATGATACTGGTGGTGTGACGCGTGATGCTCTTCGCCACATTCAG
TGGGTTCGACCTGACCGTTTCTTTAATAGAATTTTTGCTTGCTTGTGAAA
AATTGCAACAACCATCTTGGCGGGTATTCGCAGGAGCGACAACGCACACA
CACTCACACACACACGCACAGGAGTCCCATCCTGCCGTTGATCCAACGGT
CTTCGCGTAAGGATCGAAACTAAACTTCTCGACACATTGTACGGTCTAAG
AACCCGTGCTTTCCCTGTGGGCTGCAGAACGTATTGCTTGAAGTGCTCCC
TATCGTCTCGCGAGCCCTGCCTCCCTCCCCCCTCACCCCTCCTTAACCCC
CCTCCACACGTGCGCGCACACGCGTTGGCCATTCTCTCTATCTATCTATC
TATCTGGCGGACCTTTCTTTGCTTGGGGGAAATTATAATTTGCTGATACA
CACGGAAAAGTTGGAATACCTTGTCGCGAAGGGGCGCCTGCCCCCGGAGT
TCCAACGAATCGCGGAGGCGTACGGAACGGTGCGTGATTTGCTGGAGGCA
GGCCTTTCCGAGGCGAGGAAGAGTCAGCTAGAAGAGGTGAGTGTTTACGC
TGCGTATGTTTGTCGTTGGTCGCGCCATCGTCTTCACATTAAAACCGGTT
CCGGTCTCCGTTCAGTGAGTTCCTTCAGCTATCCGTGCTTGGTCCAGCCG
ACGCTGACCCCTTCCTCCGTGGCCACAAGCCAACTACCCCGGAAGGGAAG
GGGGTTGTACACCTTTCTTTCTAGAAATCGAAGAACGGACATGGTATATT
TCATAAAATGTGAGGGGTTTCTTGCGTTTGTGGTGGTGTGCTCCACTGAT
GAAGTTGAGAACGGTAATTATCAAACGCAGCAGCAAGGCGCCTGGCTCTT
GTCGAGCTTTAGTCCGTGTCGCGGTTTTATTCTCGCCAGCCTCTCTTCAC
CCCGTTTTGTTCCTCTCGCGACAGGCGTCTATTTATATATTTTGCTGTCG
TTTAGCTTTTGCCATCGAACAACGCGTGCGGACAGAAAGTACACGCTGCT
TTCCCCGTACAGACCAAACGGTGATTTCCTCCCCCACCCCCAGGGTTCGA
GCAATACACTCTCCACATACCCATCGAGGCGTCCGCGAAACCTACCGCTT
GAATAGTGAAACGCTTGATGATGCACCCTCGGCCGCTTAAGTCATAATGC
ACTCGCACGAATGCCTACTTACGTACGTACAACGACCACAAGGGGCTTGG
CCAAGGGTATAGAGGACAAACCTTCGGCCTCGGGACCTCTGACTTCGCGC
GCCTCCGGGGAACCTACAACTCCGTCATTCACGTGCCCGCGGGGCCCGCT
GACGGGGATCTCGGGGGGGGGTACCACCCTACGGGGTTCAGGAGAGCGCT
TAACCCCAACCTGGACTGGAGGGCGATTGAAGACGAGTACCTGTCGCAGG
AACTCCCGGTCCTTTGGTTTGATGAGTGAGAAAAAATACTCTGTACTTGG
GGTGGATGTGAGTCGGGTGTCACGTATTTTTGGGCTGTGCGCTGATCGCC
GATGTCGGGTGGGAGGGGTCCAAGGTGTTGGAGAGAAGCTGTCGAGAGAG
CTTGTTCTACGCTACGCTATGGTCTGATGGGCGATGGAATGCTCGGGGTA
TGGGAATGGATTCAAGGGCGGGTGGGACAGACATTTTTTGTCAACGTTGC
AAGAAGTTGCTTCGTTCTTCTTTCTTGCATACTCTCCTTGTTCGTGTCAC
TGATTTTTCTTCTAGCCCCCCACCCCCCCACCCCCGCGCAAAGAGATTTG
ACACAGGCGGACACAATGGGCCCATGTTGTTGTGGCGCCGGCATTTCCCC
GCTCCCCCGCATTCCTACGGGTAATGACGTCACAGTGAATGACCAGACAG
GTAGCAGTCCGTGCAACGTTCGCGGCAGGCAGCGAAACTTTCAGCTTGCA
GACGTATCGGTGCCCCTGCCCCTACAACTTCAACATCTGGTTATGTGATT
CTGCTGCAAGCACGGTAGGCTTTTTGCTGCTCTGCGACTGCACCAACGAC
CAGTTTCCCTATTGTCGCCAACACATGCGCGAACGCGACAGCTTTCTTTT
GCCGGAGGCCTTGCAAGGAGTGCTGGAATTCTGCCGGGAGGCCACGGTGA
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTATTGGGTGCTGTTG
GTGCTATCTCCTCTGCCACACCCACTAACATTGTGGAAAACATCTAGAGT
GATGGAACGCGAAAGATGCAATCACGTACAACCGATCTCCAACCCCCCCC
CCCTGTTGATACCCGTAGGTGTTTTTCGACATTAAGCGCGGCTACTTGGG
GGCATACTTCAACGACGGCCTTACCAGGTGAGCCCCCCCTGCGCCCCCTA
CCCGTCAGTGATAGGTCAACAGCCGCTCCTTGAAGATATATTGAAACCGA
TTGCGGGGTGATGTGTCCGTGGAGCGTAGTCGTCAAGGTCAAGCGTTTCC
AAAGAACCAGAAGTGTTTTTCGTCGTCAAGTTTCAAGCGTTCTCAACGTG
AACAGGCACTTTTTTTTCTCGCAAAACGCGGGGAGAGTACACGATGTGTT
GTACTTCCGGCAGTGCTTTGATTTTTTCTCATTAATATCACTGGCAAGAA
GTACGTGCTTCGAACGAAACTCTATGTAGAATGACAATAACGCTGAGTTT
TTTTGTACATAGATAGAGCAGGTGGAGCAAAAGAAGTACACTGCAGATGG
GAAGAATAGGACAAACAGGTGGTACAAACGCAGCATTGGGTAGACTGGAT
CCGTTGTGTGCCTTCACGACAGACACTCCACCAAGCACGGTGTGAGAGTG
CGAGACGACATCACGAACGGTCCAGTCACCAAACCGGCTAGAGCCGGTCT
TGCCCCGTACGCACCATCAGCGAAGAAGATTACATAGACAATCTGACGTG
ACGCCCCGTATGTATGTGGCCTTCGTCACGAATCTGGTTATGTTGTATTG
TGTTGTGTCGGAAGGGAGCACGCTACCTGGCAGCTAGGTTTCCGTGGTAG
ACCATTACCATCTGCGGTCCCCCCCCGCCTTTAGGCCCCATTCACCGCCC
ACGAACGAATCCACTTTTGTGAACATTTCCTTCAACTGCGCACTCTTTTT
TGTTATTTGCTCTGCTCTTCATACGGTCGGACGTTGCACCATCATCATGT
CCTGTCGCGTGCACCCAACTAAGTAGCCCATGGCTGGTTCAGATAGCACA
CGAGCTTCAGGAGCGGCTGCCTCAAGTCTTGAAAGGGATGACCCTGTCCA
ACCTCTGGGCCTACAAGTTCGATAGCGACACA

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1368:396..7277-

>mRNA_E-fasciculatus_F_contig1368.2724.1 ID=mRNA_E-fasciculatus_F_contig1368.2724.1|Name=mRNA_E-fasciculatus_F_contig1368.2724.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2418bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1368:396..7277- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCAGTACCCGCCCTAAAGCTGTTGGTCATTCCATGGGTAGTTGTTCG
TCATGCTTTGGTGGCTCTTTCCCAAGAAGATGTCAGCAGCTACAACAATC
GAGCATCCAGCGATGGCAGTACCCGCCCTAAAGCTGTTGGTCATTCCATG
GGTAGTTGTTCGTCATGCTTTGGTGGCTCTTTCCCAAGAAGATGTCAGCA
GCTACAACAATCGAGCATCCAGCGACAAACTGAATGCAGCCCAAGTCGCG
TTTACGGAGAGCTACTACCTGCAGAACATCGGCGATCTGCGAGCCGCGGC
GAGGGGGTACCAAGAGCTAGCTAGAACACGACGCGGCGGCCCCCGATGGG
CGCAAGATGTCGCCGTTGCCAAAGATACGGGATCCTCCGGGACTGGGGAG
CGTGACAGCCGTGGGCAGATCACCAAAGGAGGAGGCGGCGGCGGCGGCGG
CGGCGACAGCGGCGATCCTGGTGGCGTCATTGGTAGTGGTGGTGGTGGTT
ATGAACGTGGTGGGGACAACGGTGACGACAGTAGCGCCGTGCCTGATGCG
CTGGAAGCGTTTCTCGAGCCCTACGACGCCATCATGCGAGAGTTTAACTC
TCGATCGGTGGGCAACTGGGCTCACGCCAAATCGGGGACAAACTGAATGC
AGCCCAAGTCGCGTTTACGGAGAGCTACTACCTGCAGAACATCGGCGATC
TGCGAGCCGCGGCGAGGGGGTACCAAGAGCTAGCTAGAACACGACGCGGC
GGCCCCCGATGGGCGCAAGATGTCGCCGTTGCCAAAGATACGGGATCCTC
CGGGACTGGGGAGCGTGACAGCCGTGGGCAGATCACCAAAGGAGGAGGCG
GCGGCGGCGGCGGCGGCGACAGCGGCGATCCTGGTGGCGTCATTGGTAGT
GGTGGTGGTGGTTATGAACGTGGTGGGGACAACGGTGACGACAGTAGCGC
CGTGCCTGATGCGCTGGAAGCGTTTCTCGAGCCCTACGACGCCATCATGC
GAGAGTTTAACTCTCGATCGGTGGGCAACTGGGCTCACGCCAAATCGGGG
GGCTTAAAGGTGTCAAGCGCTTGGGGACCAGACGTGTTCGACTACTCCAC
GCGAGGGGGAAACTTCATTACCGCGCCTCACAAGCTGGACCACGACCAAG
AGCAGGGCTTAAAGGTGTCAAGCGCTTGGGGACCAGACGTGTTCGACTAC
TCCACGCGAGGGGGAAACTTCATTACCGCGCCTCACAAGCTGGACCACGA
CCAAGAGCAGTTGGAATACCTTGTCGCGAAGGGGCGCCTGCCCCCGGAGT
TCCAACGAATCGCGGAGGCGTACGGAACGGTGCGTGATTTGCTGGAGGCA
GGCCTTTCCGAGGCGAGGAAGAGTCAGCTAGAAGAGTTGGAATACCTTGT
CGCGAAGGGGCGCCTGCCCCCGGAGTTCCAACGAATCGCGGAGGCGTACG
GAACGGTGCGTGATTTGCTGGAGGCAGGCCTTTCCGAGGCGAGGAAGAGT
CAGCTAGAAGAGGGGCTTGGCCAAGGGTATAGAGGACAAACCTTCGGCCT
CGGGACCTCTGACTTCGCGCGCCTCCGGGGAACCTACAACTCCGTCATTC
ACGTGCCCGCGGGGCCCGCTGACGGGGATCTCGGGGGGGGGTACCACCCT
ACGGGGTTCAGGAGAGCGCTTAACCCCAACCTGGACTGGAGGGCGATTGA
AGACGAGTACCTGTCGCAGGAACTCCCGGTCCTTTGGTTTGATGAGGGCT
TGGCCAAGGGTATAGAGGACAAACCTTCGGCCTCGGGACCTCTGACTTCG
CGCGCCTCCGGGGAACCTACAACTCCGTCATTCACGTGCCCGCGGGGCCC
GCTGACGGGGATCTCGGGGGGGGGTACCACCCTACGGGGTTCAGGAGAGC
GCTTAACCCCAACCTGGACTGGAGGGCGATTGAAGACGAGTACCTGTCGC
AGGAACTCCCGGTCCTTTGGTTTGATGACTTTCTTTTGCCGGAGGCCTTG
CAAGGAGTGCTGGAATTCTGCCGGGAGGCCACGCTTTCTTTTGCCGGAGG
CCTTGCAAGGAGTGCTGGAATTCTGCCGGGAGGCCACGGTGTTTTTCGAC
ATTAAGCGCGGCTACTTGGGGGCATACTTCAACGACGGCCTTACCAGGTG
TTTTTCGACATTAAGCGCGGCTACTTGGGGGCATACTTCAACGACGGCCT
TACCAGCCCATGGCTGGTTCAGATAGCACACGAGCTTCAGGAGCGGCTGC
CTCAAGTCTTGAAAGGGATGACCCTGTCCAACCTCTGGGCCTACAAGTTC
GATAGCGACACACCCATGGCTGGTTCAGATAGCACACGAGCTTCAGGAGC
GGCTGCCTCAAGTCTTGAAAGGGATGACCCTGTCCAACCTCTGGGCCTAC
AAGTTCGATAGCGACACA