mRNA_E-fasciculatus_F_contig13664.2717.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13664.2717.1 vs. uniprot
Match: D7FQK7_ECTSI (Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQK7_ECTSI) HSP 1 Score: 264 bits (675), Expect = 1.130e-81 Identity = 138/166 (83.13%), Postives = 139/166 (83.73%), Query Frame = 1
Query: 4 RVHLLLSHGVKPYLVFDGGHLPAKAGKEEERRARRESNLQRGMQLTREGNPSGAHQFFCKAADVTPFMAHQVIQARALLICPMTMPGMITPMVITIIFGRIPGVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGCTRVVLKLDRDGTGQEVDLREVFSRR 501
RVHLLLSHGVKPYLVFDGGHLPAKAGKEEERRARRESNLQRGMQL REGNPSGAHQFFCKAADVTPFMAHQVI+ RIPGVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGCTRVV KLDRDGTGQEVDLREVFSRR
Sbjct: 62 RVHLLLSHGVKPYLVFDGGHLPAKAGKEEERRARRESNLQRGMQLMREGNPSGAHQFFCKAADVTPFMAHQVIK-------------------------RIPGVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGCTRVVFKLDRDGTGQEVDLREVFSRR 202
BLAST of mRNA_E-fasciculatus_F_contig13664.2717.1 vs. uniprot
Match: A0A835Z506_9STRA (Exonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z506_9STRA) HSP 1 Score: 156 bits (394), Expect = 3.860e-44 Identity = 85/166 (51.20%), Postives = 105/166 (63.25%), Query Frame = 1
Query: 4 RVHLLLSHGVKPYLVFDGGHLPAKAGKEEERRARRESNLQRGMQLTREGNPSGAHQFFCKAADVTPFMAHQVIQARALLICPMTMPGMITPMVITIIFGRIPGVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGCTRVVLKLDRDGTGQEVDLREVFSRR 501
R+ +LL G+KPYLVFDG +LPAK GKE+ER +RE + +R Q REG+ +GA F KA DVTP MA Q I A G R+VVAPYEADAQLG+L R+G +D VITEDSD++LFGCTRV+ KL +D GQ+V L EVF+ R
Sbjct: 62 RLDMLLHFGLKPYLVFDGDYLPAKGGKEKERAEKREESRKRAEQCLREGDTAGARAHFIKAVDVTPAMAAQFIAAAR----------------------SRGGARFVVAPYEADAQLGYLCRSGQIDLVITEDSDLLLFGCTRVLFKLGKDAAGQQVTLHEVFTER 205
BLAST of mRNA_E-fasciculatus_F_contig13664.2717.1 vs. uniprot
Match: A0A067MCQ2_9AGAM (Exonuclease 1 n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067MCQ2_9AGAM) HSP 1 Score: 143 bits (361), Expect = 6.790e-39 Identity = 76/154 (49.35%), Postives = 95/154 (61.69%), Query Frame = 1
Query: 1 HRVHLLLSHGVKPYLVFDGGHLPAKAGKEEERRARRESNLQRGMQLTREGNPSGAHQFFCKAADVTPFMAHQVIQARALLICPMTMPGMITPMVITIIFGRIPGVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGCTRVVLKLDRDGT 462
HRV LLL HGV PY+VFDGG LPAK G E ER+ +R+ NL R LT +G + A F+ K DVTP MA+Q+I+A R GV+YVVAPYEAD QL +L R+G V ++TEDSD+++FGC V+ KLD DGT
Sbjct: 61 HRVRLLLHHGVTPYMVFDGGPLPAKKGTESERKKKRDENLARATALTAQGKHTQARDFYTKCVDVTPEMAYQLIKAL-----------------------RAEGVKYVVAPYEADPQLAYLERHGIVQGIVTEDSDLLVFGCKNVIFKLDSDGT 191
BLAST of mRNA_E-fasciculatus_F_contig13664.2717.1 vs. uniprot
Match: A0A5D6Y0X9_9STRA (Exonuclease 1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0X9_9STRA) HSP 1 Score: 147 bits (370), Expect = 4.340e-38 Identity = 79/161 (49.07%), Postives = 102/161 (63.35%), Query Frame = 1
Query: 4 RVHLLLSHGVKPYLVFDGGHLPAKAGKEEERRARRESNLQRGMQLTREGNPSGAHQFFCKAADVTPFMAHQVIQARALLICPMTMPGMITPMVITIIFGRIPGVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGCTRVVLKLDRDGTGQEVDLRE 486
RV +LL +G+ PY+VFDGG LP K G E ERRA R+ N + G+QL ++GN + A + F +AADV+PFMAH+VIQ + GVRYVVAPYEADAQL +L +NG D VITEDSD + FGC V+ KLD+DG G +++E
Sbjct: 62 RVDMLLHNGITPYVVFDGGPLPMKKGTETERRAARQKNRELGIQLFKQGNHAEARKHFTRAADVSPFMAHRVIQRL-----------------------KAKGVRYVVAPYEADAQLAYLTKNGLADGVITEDSDCLPFGCGTVLFKLDKDGVGLAQEIKE 199
BLAST of mRNA_E-fasciculatus_F_contig13664.2717.1 vs. uniprot
Match: A0A6H5L852_9PHAE (Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L852_9PHAE) HSP 1 Score: 134 bits (338), Expect = 1.950e-37 Identity = 66/76 (86.84%), Postives = 69/76 (90.79%), Query Frame = 1
Query: 274 PMVITIIFGRIPGVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGCTRVVLKLDRDGTGQEVDLREVFSRR 501
P + ++ RI GVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGCTRVV KLDRDGTGQEVDLREVFSRR
Sbjct: 12 PTFMKVVIKRISGVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGCTRVVFKLDRDGTGQEVDLREVFSRR 87
BLAST of mRNA_E-fasciculatus_F_contig13664.2717.1 vs. uniprot
Match: UPI002008A2F7 (PIN domain-like protein n=1 Tax=Epithele typhae TaxID=378194 RepID=UPI002008A2F7) HSP 1 Score: 139 bits (350), Expect = 3.020e-37 Identity = 77/150 (51.33%), Postives = 94/150 (62.67%), Query Frame = 1
Query: 1 HRVHLLLSHGVKPYLVFDGGHLPAKAGKEEERRARRESNLQRGMQLTREGNPSGAHQFFCKAADVTPFMAHQVIQARALLICPMTMPGMITPMVITIIFGRIPGVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGCTRVVLKLD 450
HRV LL +G++PYLVFDGG LPAK G E +R+ RRE NL R L +GN S A +F+ K DVTP MA+Q+I+A R GV YVVAPYEADAQL +L R G VDA+ITEDSD+++FGC V+ KLD
Sbjct: 61 HRVRLLRHYGIQPYLVFDGGPLPAKQGTESDRKQRREENLARANALAAQGNHSQAREFYVKCVDVTPQMAYQLIKAL-----------------------RAEGVAYVVAPYEADAQLAYLERIGLVDAIITEDSDLLVFGCKTVLFKLD 187
BLAST of mRNA_E-fasciculatus_F_contig13664.2717.1 vs. uniprot
Match: A0A2D4BRI3_PYTIN (Exonuclease 1 (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRI3_PYTIN) HSP 1 Score: 141 bits (355), Expect = 5.470e-37 Identity = 79/157 (50.32%), Postives = 97/157 (61.78%), Query Frame = 1
Query: 4 RVHLLLSHGVKPYLVFDGGHLPAKAGKEEERRARRESNLQRGMQLTREGNPSGAHQFFCKAADVTPFMAHQVIQARALLICPMTMPGMITPMVITIIFGRIPGVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGCTRVVLKLDRDGTGQEV 474
RV LL +G+ PY+VFDGG LP K E++RRA R N + G+Q R+ N S A + F +AADV+PFMAH+VIQ + GV+YVVAPYEADAQL FL R G VD VITEDSD + FGC +V+ K+DRDG QEV
Sbjct: 62 RVQALLQNGITPYVVFDGGPLPMKKATEDDRRAARAKNRELGLQYYRQRNYSEARKCFSRAADVSPFMAHRVIQRL-----------------------KAMGVKYVVAPYEADAQLAFLVRAGLVDGVITEDSDCLPFGCGKVLFKMDRDGVAQEV 195
BLAST of mRNA_E-fasciculatus_F_contig13664.2717.1 vs. uniprot
Match: K3WYL4_GLOUD (Exonuclease 1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYL4_GLOUD) HSP 1 Score: 138 bits (347), Expect = 1.930e-36 Identity = 75/160 (46.88%), Postives = 99/160 (61.88%), Query Frame = 1
Query: 4 RVHLLLSHGVKPYLVFDGGHLPAKAGKEEERRARRESNLQRGMQLTREGNPSGAHQFFCKAADVTPFMAHQVIQARALLICPMTMPGMITPMVITIIFGRIPGVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGCTRVVLKLDRDGTGQEVDLR 483
RV +L+ +G+ PY+VFDGG LP K G E ERRA R+ N + G+Q ++ N S A ++F +AADV+PFMAH+VIQ + V+YVVAPYEADAQL FL +NG D VITEDSD + FGC V+ KLD+DG G +++
Sbjct: 53 RVEILVRNGITPYVVFDGGPLPMKKGTEVERRAARQKNRELGIQCYKQRNYSEARKYFSRAADVSPFMAHRVIQRL-----------------------KAQNVQYVVAPYEADAQLAFLTKNGLADGVITEDSDCLPFGCGTVLFKLDKDGVGVGQEIK 189
BLAST of mRNA_E-fasciculatus_F_contig13664.2717.1 vs. uniprot
Match: UPI00046216DE (PIN domain-like protein n=1 Tax=Trametes versicolor (strain FP-101664) TaxID=717944 RepID=UPI00046216DE) HSP 1 Score: 136 bits (343), Expect = 3.610e-36 Identity = 77/165 (46.67%), Postives = 96/165 (58.18%), Query Frame = 1
Query: 1 HRVHLLLSHGVKPYLVFDGGHLPAKAGKEEERRARRESNLQRGMQLTREGNPSGAHQFFCKAADVTPFMAHQVIQARALLICPMTMPGMITPMVITIIFGRIPGVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGCTRVVLKLDRDGTGQEVDLREVFS 495
HRV LL HG+ PYLVFDGG LPAK G E ER+ RR+ NL R L +G S A +++ K DVTP MA+Q+I+A R GV YVVAPYEADAQL +L R G VD +ITEDSD+++FGC V+ KLD + R+ F+
Sbjct: 61 HRVRLLRHHGITPYLVFDGGPLPAKQGTEAERKQRRDENLARANALAAQGKHSQAREYYVKCVDVTPQMAYQLIKAL-----------------------RAEGVPYVVAPYEADAQLAYLERIGAVDGIITEDSDLLVFGCKNVLFKLDHAASTVTCIARKDFA 202
BLAST of mRNA_E-fasciculatus_F_contig13664.2717.1 vs. uniprot
Match: A0A067NYL7_PLEOS (Exonuclease 1 n=2 Tax=Pleurotus ostreatus TaxID=5322 RepID=A0A067NYL7_PLEOS) HSP 1 Score: 135 bits (340), Expect = 1.150e-35 Identity = 74/150 (49.33%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 1 HRVHLLLSHGVKPYLVFDGGHLPAKAGKEEERRARRESNLQRGMQLTREGNPSGAHQFFCKAADVTPFMAHQVIQARALLICPMTMPGMITPMVITIIFGRIPGVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGCTRVVLKLD 450
HRV LL HG++PY+VFDGG LPAK G E ER+ RRE NL RG L +G S A ++ K DVTP MA+Q+I+A + V YVVAPYEADAQL +L R G VD +ITEDSD+++FGC V+ KLD
Sbjct: 61 HRVRLLRHHGIEPYIVFDGGPLPAKRGTESERKQRREENLARGHALAAQGKHSQARDYYVKCVDVTPQMAYQLIKAL-----------------------KAESVSYVVAPYEADAQLAYLERIGLVDGIITEDSDLLVFGCRNVLFKLD 187 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13664.2717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13664.2717.1 >prot_E-fasciculatus_F_contig13664.2717.1 ID=prot_E-fasciculatus_F_contig13664.2717.1|Name=mRNA_E-fasciculatus_F_contig13664.2717.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=168bp HRVHLLLSHGVKPYLVFDGGHLPAKAGKEEERRARRESNLQRGMQLTREGback to top mRNA from alignment at E-fasciculatus_F_contig13664:355..1384- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13664.2717.1 ID=mRNA_E-fasciculatus_F_contig13664.2717.1|Name=mRNA_E-fasciculatus_F_contig13664.2717.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1030bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13664:355..1384- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13664:355..1384- >mRNA_E-fasciculatus_F_contig13664.2717.1 ID=mRNA_E-fasciculatus_F_contig13664.2717.1|Name=mRNA_E-fasciculatus_F_contig13664.2717.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1008bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13664:355..1384- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |