mRNA_E-fasciculatus_F_contig1365.2710.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1365.2710.1 vs. uniprot
Match: D8LKC1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKC1_ECTSI) HSP 1 Score: 87.0 bits (214), Expect = 2.480e-21 Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 1
Query: 52 QVMNAGNCKVLLHPQWGSAVYPASLFCTAPSDLVQRLLEE 171
QVMNAGNCKVLLHPQWGSAVYPASLFCTAPSDLVQRLL+E
Sbjct: 22 QVMNAGNCKVLLHPQWGSAVYPASLFCTAPSDLVQRLLDE 61
BLAST of mRNA_E-fasciculatus_F_contig1365.2710.1 vs. uniprot
Match: A0A6H5K3L9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3L9_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 6.030e-20 Identity = 39/40 (97.50%), Postives = 39/40 (97.50%), Query Frame = 1
Query: 52 QVMNAGNCKVLLHPQWGSAVYPASLFCTAPSDLVQRLLEE 171
QVMNAGNCKVLLHPQWGSAVYPASLFCTAPSD VQRLLEE
Sbjct: 132 QVMNAGNCKVLLHPQWGSAVYPASLFCTAPSDFVQRLLEE 171
BLAST of mRNA_E-fasciculatus_F_contig1365.2710.1 vs. uniprot
Match: A0A150H4A2_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H4A2_GONPE) HSP 1 Score: 64.3 bits (155), Expect = 4.560e-12 Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 1 TRLSGYSPNMPFLSICT--QVMNAGNCKVLLHPQWGSAVYPASLFCTAPSDLVQRLLEE 171
T L+ P +P LS+ Q NAG CKVLLHP WGSAVYPASLF AP + +Q +E+
Sbjct: 32 TDLNNVYPEVPALSVLMGYQTANAGCCKVLLHPVWGSAVYPASLFTEAPLEALQAAIED 90
BLAST of mRNA_E-fasciculatus_F_contig1365.2710.1 vs. uniprot
Match: A0A835Z3S3_9STRA (Methylmalonic aciduria and homocystinuria type D protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3S3_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 3.870e-11 Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 1
Query: 52 QVMNAGNCKVLLHPQWGSAVYPASLFCTAPSDLVQRLLE 168
QVMNAG C+VLLHP WGS VYPAS F TAP + V+R+LE
Sbjct: 111 QVMNAGMCRVLLHPTWGSHVYPASCFTTAPIEAVERVLE 149
BLAST of mRNA_E-fasciculatus_F_contig1365.2710.1 vs. uniprot
Match: A0A6A5B3P0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5B3P0_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 8.990e-11 Identity = 24/38 (63.16%), Postives = 33/38 (86.84%), Query Frame = 1
Query: 58 MNAGNCKVLLHPQWGSAVYPASLFCTAPSDLVQRLLEE 171
++AG CK+L+HP+WG+AVYPASLF TAPSDLV ++ +
Sbjct: 34 LSAGMCKILIHPEWGAAVYPASLFTTAPSDLVLDIVSK 71
BLAST of mRNA_E-fasciculatus_F_contig1365.2710.1 vs. uniprot
Match: A0A8J4C3C3_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C3C3_9CHLO) HSP 1 Score: 62.0 bits (149), Expect = 1.670e-10 Identity = 32/51 (62.75%), Postives = 34/51 (66.67%), Query Frame = 1
Query: 1 TRLSGYSPNMPFLSICT--QVMNAGNCKVLLHPQWGSAVYPASLFCTAPSD 147
T L+ P +P LSI Q NAG CKVLLHP WGSAVYPASLF AP D
Sbjct: 103 TELNTVYPEVPALSILMGYQTANAGCCKVLLHPVWGSAVYPASLFTEAPQD 153
BLAST of mRNA_E-fasciculatus_F_contig1365.2710.1 vs. uniprot
Match: A0A7S3XWY3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWY3_HETAK) HSP 1 Score: 62.4 bits (150), Expect = 1.730e-10 Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = 1
Query: 55 VMNAGNCKVLLHPQWGSAVYPASLFCTAPSDLVQRLLEE 171
V+NAG C+VLLHP WGSAVYPA+LF TAP + V +LEE
Sbjct: 140 VLNAGMCRVLLHPVWGSAVYPATLFTTAPHEAVAEVLEE 178
BLAST of mRNA_E-fasciculatus_F_contig1365.2710.1 vs. uniprot
Match: A0A7S2CG30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG30_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 2.640e-10 Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 1
Query: 52 QVMNAGNCKVLLHPQWGSAVYPASLFCTAPSDLVQRL 162
QVMNAG CKVLLHP+WG AVYPA++F AP D+V L
Sbjct: 139 QVMNAGPCKVLLHPRWGGAVYPATMFTNAPEDVVLEL 175
BLAST of mRNA_E-fasciculatus_F_contig1365.2710.1 vs. uniprot
Match: A0A8J4C5X7_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C5X7_9CHLO) HSP 1 Score: 62.0 bits (149), Expect = 3.480e-10 Identity = 32/51 (62.75%), Postives = 34/51 (66.67%), Query Frame = 1
Query: 1 TRLSGYSPNMPFLSICT--QVMNAGNCKVLLHPQWGSAVYPASLFCTAPSD 147
T L+ P +P LSI Q NAG CKVLLHP WGSAVYPASLF AP D
Sbjct: 153 TELNTVYPEVPALSILMGYQTANAGCCKVLLHPVWGSAVYPASLFTEAPQD 203
BLAST of mRNA_E-fasciculatus_F_contig1365.2710.1 vs. uniprot
Match: A0A7S0RSJ5_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RSJ5_9CHLO) HSP 1 Score: 60.8 bits (146), Expect = 4.570e-10 Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 1
Query: 61 NAGNCKVLLHPQWGSAVYPASLFCTAPSDLVQRLLE 168
NAG CKVLLHP+WGSAVYPAS+F TAP+D +Q ++
Sbjct: 126 NAGCCKVLLHPRWGSAVYPASMFTTAPADALQAAID 161 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1365.2710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1365.2710.1 >prot_E-fasciculatus_F_contig1365.2710.1 ID=prot_E-fasciculatus_F_contig1365.2710.1|Name=mRNA_E-fasciculatus_F_contig1365.2710.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=48bp MPFLSICTQVMNAGNCKVLLHPQWGSAVYPASLFCTAPSDLVQRLLEEback to top mRNA from alignment at E-fasciculatus_F_contig1365:16300..16470- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1365.2710.1 ID=mRNA_E-fasciculatus_F_contig1365.2710.1|Name=mRNA_E-fasciculatus_F_contig1365.2710.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=171bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1365:16300..16470- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1365:16300..16470- >mRNA_E-fasciculatus_F_contig1365.2710.1 ID=mRNA_E-fasciculatus_F_contig1365.2710.1|Name=mRNA_E-fasciculatus_F_contig1365.2710.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=288bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1365:16300..16470- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |