prot_E-fasciculatus_F_contig1365.2708.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1365.2708.1
Unique Nameprot_E-fasciculatus_F_contig1365.2708.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length110
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: D7FVL6_ECTSI (Hypothetical leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL6_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 3.150e-25
Identity = 60/97 (61.86%), Postives = 69/97 (71.13%), Query Frame = 0 
Query:    1 MPLSEKHARLQIRKWNLEVRVDTDTMLNKKVARARCFPWACQQGEDENIAPEVQRAATPTAIAQGAAGVASTRISWKVGSFGGRFGQGRLPPRSKKG 97
            M L EKHARLQIRKWNLE R+DTDTMLNKK AR R F WACQQ EDE+I+PE Q+ AT  A A  A  VASTR   +  + G   G+G+ PP SK+G
Sbjct:  790 MTLLEKHARLQIRKWNLEARMDTDTMLNKKAARGRRFSWACQQCEDEHISPEAQKEATQKANALSAVRVASTRSPGRSVTSGD-IGRGKSPPWSKRG 885
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVL6_ECTSI3.150e-2561.86Hypothetical leucine rich repeat and GCG domain-co... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1365contigE-fasciculatus_F_contig1365:5261..6262 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1365.2708.1mRNA_E-fasciculatus_F_contig1365.2708.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1365 4793..8970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1365.2708.1 ID=prot_E-fasciculatus_F_contig1365.2708.1|Name=mRNA_E-fasciculatus_F_contig1365.2708.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=110bp
MPLSEKHARLQIRKWNLEVRVDTDTMLNKKVARARCFPWACQQGEDENIA
PEVQRAATPTAIAQGAAGVASTRISWKVGSFGGRFGQGRLPPRSKKGYTP
NQEAARPSP*
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