mRNA_E-fasciculatus_F_contig1365.2707.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1365.2707.1
Unique NamemRNA_E-fasciculatus_F_contig1365.2707.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1365.2707.1 vs. uniprot
Match: D8LKB8_ECTSI (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKB8_ECTSI)

HSP 1 Score: 509 bits (1312), Expect = 1.340e-172
Identity = 256/262 (97.71%), Postives = 259/262 (98.85%), Query Frame = 1
Query:  640 QPGLNGKGGIGGVEHLTQCDISEKALLRGASSSRSRQEEGRGGAAAGKEGSVEVDTCCVVADEEFLPFAPASFDLVLSNLALHWVNDLPGALGQIKQVLKPDGAFIGAMLGGSTLTELRSCLLLAEQEREGGQSIHTSPSAHVADCGSLLQSAGFSLPTVDQDTVRVGYPNAFVLMEHLQGMGESNAAVNTRPRVSRETMLAAAAAYQELYGEDDGTVQATFQVVYMIGWAPHESQPQPKRRGSGQARIGDVTVTQSNPPEV 1425
            +PGLNGKGG+GGVEHLTQCDISEKALLRGASSSRSRQEE RGGAAAG+EGSVEV TCCVVADEEFLPFAPASFDLVLSNLALHWVNDLPGALGQIKQVLKPDGAFIGAMLGGSTLTELRSCLLLAEQEREGGQSIHTSPSAHVADCGSLLQSAGFSLPTVDQDTVRVGYPNAFVLMEHLQGMGESNAAVNTRPRVSRETMLAAAAAYQELYGEDDGTVQATFQVVYMIGWAPHESQPQPKRRGSGQARIGDVTVTQS PPEV
Sbjct:  104 KPGLNGKGGVGGVEHLTQCDISEKALLRGASSSRSRQEESRGGAAAGEEGSVEVGTCCVVADEEFLPFAPASFDLVLSNLALHWVNDLPGALGQIKQVLKPDGAFIGAMLGGSTLTELRSCLLLAEQEREGGQSIHTSPSAHVADCGSLLQSAGFSLPTVDQDTVRVGYPNAFVLMEHLQGMGESNAAVNTRPRVSRETMLAAAAAYQELYGEDDGTVQATFQVVYMIGWAPHESQPQPKRRGSGQARIGDVTVTQSEPPEV 365          
BLAST of mRNA_E-fasciculatus_F_contig1365.2707.1 vs. uniprot
Match: A0A4D9D585_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D585_9STRA)

HSP 1 Score: 309 bits (792), Expect = 6.140e-95
Identity = 154/247 (62.35%), Postives = 188/247 (76.11%), Query Frame = 1
Query:  646 GLNGKGGIGGVEHLTQCDISEKALLRGASSSRSRQEEGRGGAAAGKEGSVEVDTCCVVADEEFLPFAPASFDLVLSNLALHWVNDLPGALGQIKQVLKPDGAFIGAMLGGSTLTELRSCLLLAEQEREGGQSIHTSPSAHVADCGSLLQSAGFSLPTVDQDTVRVGYPNAFVLMEHLQGMGESNAAVNTRPRVSRETMLAAAAAYQELYGEDDGTVQATFQVVYMIGWAPHESQPQPKRRGSGQARI 1386
            GLNGKGG GG+E L +C ++E+ LL  + +S+S  +EG                  ++ DEE LPF+PASFDL++SNL+LHW+NDLPGA+ Q + VLKPDG F+ +M GG+TL ELR    LAEQEREGG S H SPSAHVADCGSLLQ+AGF+LPTVD DT+ V YP+A VLMEHLQGMGES+A +  RP VSRET LAAAA YQ+LY E DG+V ATFQVVYMIGWAPH+SQP+PK+RGSG+  +
Sbjct:  109 GLNGKGGAGGIETLVRCGLTEEGLLPASMTSKSVTQEGN------------AKILNLLGDEEHLPFSPASFDLIVSNLSLHWINDLPGAMTQARDVLKPDGVFLASMFGGNTLKELRVAFQLAEQEREGGISPHISPSAHVADCGSLLQAAGFALPTVDVDTITVSYPDALVLMEHLQGMGESSAILTRRPYVSRETFLAAAAIYQDLYAEADGSVPATFQVVYMIGWAPHDSQPRPKKRGSGRVSM 343          
BLAST of mRNA_E-fasciculatus_F_contig1365.2707.1 vs. uniprot
Match: A0A835Z106_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z106_9STRA)

HSP 1 Score: 302 bits (774), Expect = 2.270e-92
Identity = 163/262 (62.21%), Postives = 190/262 (72.52%), Query Frame = 1
Query:  646 GLNGKGGIGGVEHLTQCDISEKALLRGASSSRSRQEEGRGGAAAGKEGSVEVDT--CC--------VVADEEFLP--FAPASFDLVLSNLALHWVNDLPGALGQIKQVLKPDGAFIGAMLGGSTLTELRSCLLLAEQEREGGQSIHTSPSAHVADCGSLLQSAGFSLPTVDQDTVRVGYPNAFVLMEHLQGMGESNAAVNTRPRVSRETMLAAAAAYQELYGEDDGTVQATFQVVYMIGWAPHESQPQPKRRGSGQARIGDV 1395
            GL G GGIGGV  L QCD+S  ALLR  +++ +  EE R      K   V+     CC        + ADEE L   F  ++FDLVLSNL+LHWVNDLP  L QI+ +LKPDG FIGAMLGG TLTELRSCLLLAEQEREGG S HTSPSAHV+DCG+LL +AGF++PTVDQDT ++ YPNAF LMEH+Q MGE NA +  R  VSR+T LAAAA YQE +G D G+V ATFQV+YMIGWAPH SQPQPKRRGS Q  + +V
Sbjct:   72 GLGGTGGIGGVRTLVQCDLSAGALLRAQAAAVTLPEEQRRRV---KVSYVQAHPGICCGAVPTAFTLEADEEDLESHFDASTFDLVLSNLSLHWVNDLPSTLRQIRSILKPDGVFIGAMLGGETLTELRSCLLLAEQEREGGMSPHTSPSAHVSDCGNLLAAAGFTIPTVDQDTFQIEYPNAFALMEHIQAMGEGNAVLAPRTAVSRDTFLAAAALYQERHGTDSGSVVATFQVLYMIGWAPHASQPQPKRRGSAQHSLREV 330          
BLAST of mRNA_E-fasciculatus_F_contig1365.2707.1 vs. uniprot
Match: A0A667XQM2_9TELE (NADH:ubiquinone oxidoreductase complex assembly factor 5 n=2 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667XQM2_9TELE)

HSP 1 Score: 259 bits (662), Expect = 1.580e-76
Identity = 136/250 (54.40%), Postives = 174/250 (69.60%), Query Frame = 1
Query:  676 VEHLTQCDISEKALLRGASSSRSRQEEGRGGAAAGKEGSVEVDTCCVVADEEFLPFAPASFDLVLSNLALHWVNDLPGALGQIKQVLKPDGAFIGAMLGGSTLTELRSCLLLAEQEREGGQSIHTSPSAHVADCGSLLQSAGFSLPTVDQDTVRVGYPNAFVLMEHLQGMGESNAAVNTRPRVSRETMLAAAAAYQELYGEDDGTVQATFQVVYMIGWAPHESQPQPKRRGSGQARIGDVT-VTQSNPPE 1422
             EHL++ D+ ++ LL   + S  +Q             S E+ T CV+ADEEFLPF   +FDLV+S+++LHW+NDLPGAL QI+QVLKPDG FIGAM+GG TL ELR  L LAE EREGG S H SP   V D G+LL  AGFS+ TVD D ++V YP  F +M  LQGMGESN A N R  + R+TMLAAAA Y+E+YG +DG+V ATF+++YMIGW PHESQ +P +RGS  A  GD++ ++Q  P +
Sbjct:   75 AEHLSK-DVVQRLLLTDITHSALKQRR-----------SCEMPTHCVLADEEFLPFRENTFDLVVSSMSLHWINDLPGALRQIQQVLKPDGVFIGAMVGGETLYELRCSLQLAETEREGGFSPHVSPYTAVTDLGNLLGQAGFSMLTVDIDEIQVHYPGIFEVMNDLQGMGESNCAWNRRALLHRDTMLAAAAVYKEMYGNEDGSVPATFEILYMIGWKPHESQAKPAKRGSATASFGDLSKISQPTPSD 312          
BLAST of mRNA_E-fasciculatus_F_contig1365.2707.1 vs. uniprot
Match: A0A024G8D9_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G8D9_9STRA)

HSP 1 Score: 256 bits (655), Expect = 3.160e-75
Identity = 137/252 (54.37%), Postives = 178/252 (70.63%), Query Frame = 1
Query:  673 GVEHLTQCDISEKALLRGASSSRSRQEEGRGGAAAGKEGSVEVDTCCVVADEEFLPFAPASFDLVLSNLALHWVNDLPGALGQIKQVLKPDGAFIGAMLGGSTLTELRSCLLLAEQEREGGQSIHTSPSAHVADCGSLLQSAGFSLPTVDQDTVRVGYPNAFVLMEHLQGMGESNAAVNTRPRVSRETMLAAAAAYQELYGEDDGTVQATFQVVYMIGWAPHESQPQPKRRGSGQARIGDVTVT--QSNPPE 1422
            G++ L Q DISEK L +   SS SR E+G           +++    V  DEEFLPF  + FDL++S+L+LHWVNDLP    QI++ LKPDGAFIGA+LGG TL ELRS  +LA+QER GG S H SP  +VAD G+LLQ AGFSL TVD D ++V YPNA  LMEH+QGMGE+NA+V  + R++++++LAAA+ YQ +YG +DG V ATFQV+Y+IGWAPH SQ  P RRGS Q  + D++    +SN P+
Sbjct:   99 GIQELVQSDISEKLLQK---SSASRNEDG----------CLQMSYLAV--DEEFLPFKKSHFDLIMSSLSLHWVNDLPSTFVQIRECLKPDGAFIGAVLGGDTLQELRSAFILADQERLGGISPHISPFMNVADAGNLLQGAGFSLCTVDTDYIQVDYPNALTLMEHVQGMGENNASV-LKGRMTKDSLLAAASIYQAMYGLEDGLVPATFQVIYLIGWAPHSSQKAPLRRGSAQQSLKDISTFHHKSNAPD 334          
BLAST of mRNA_E-fasciculatus_F_contig1365.2707.1 vs. uniprot
Match: F0WBY4_9STRA (Uncharacterized protein AlNc14C54G4171 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBY4_9STRA)

HSP 1 Score: 256 bits (653), Expect = 5.800e-75
Identity = 133/248 (53.63%), Postives = 171/248 (68.95%), Query Frame = 1
Query:  673 GVEHLTQCDISEKALLRGASSSRSRQEEGRGGAAAGKEGSVEVDTCCVVADEEFLPFAPASFDLVLSNLALHWVNDLPGALGQIKQVLKPDGAFIGAMLGGSTLTELRSCLLLAEQEREGGQSIHTSPSAHVADCGSLLQSAGFSLPTVDQDTVRVGYPNAFVLMEHLQGMGESNAAVNTRPRVSRETMLAAAAAYQELYGEDDGTVQATFQVVYMIGWAPHESQPQPKRRGSGQARIGDVTVTQSNP 1416
            G++ L QCD+SEK LL  +S+SR R++               + T     DEEFLPF  + FDL++S+L LHWVNDLP    QI+  LKPDGAFIGA+LGG TL ELRS  +LA+QER GG S H SP  +VAD G+LLQ AGFSL TVD D ++V YPNA  LMEHLQGMGE+NA+V  + R++++++LA A+ YQ +YG +DG V ATFQV+Y+IGWAPH SQ  P RRGS Q  + +++     P
Sbjct:   99 GIQELLQCDLSEKLLLN-SSASRIREDS--------------LQTSYFAVDEEFLPFKKSHFDLIISSLNLHWVNDLPSTFTQIRDCLKPDGAFIGAVLGGDTLQELRSAFILADQERLGGISPHISPFMNVADAGNLLQGAGFSLCTVDTDYIQVDYPNALSLMEHLQGMGENNASV-LKGRMTKDSLLATASIYQTMYGLEDGLVPATFQVIYLIGWAPHPSQNAPLRRGSAQKSLKEISTFHHEP 330          
BLAST of mRNA_E-fasciculatus_F_contig1365.2707.1 vs. uniprot
Match: A0A3Q3GAM7_9LABR (Arginine-hydroxylase NDUFAF5, mitochondrial-like n=2 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3GAM7_9LABR)

HSP 1 Score: 255 bits (652), Expect = 1.130e-74
Identity = 134/241 (55.60%), Postives = 167/241 (69.29%), Query Frame = 1
Query:  676 VEHLTQCDISEKALLRGASSSRSRQEEGRGGAAAGKEGSVEVDTCCVVADEEFLPFAPASFDLVLSNLALHWVNDLPGALGQIKQVLKPDGAFIGAMLGGSTLTELRSCLLLAEQEREGGQSIHTSPSAHVADCGSLLQSAGFSLPTVDQDTVRVGYPNAFVLMEHLQGMGESNAAVNTRPRVSRETMLAAAAAYQELYGEDDGTVQATFQVVYMIGWAPHESQPQPKRRGSGQARIGDVT 1398
            VE L   DISE++L +      +RQ               E+ T CV+ADEEFLPF   +FDLV+S+L+LHW+NDLPGAL QI+QVLKPDG FIGAM+GG TL ELR  L LAE EREGG S H SP   V D G+LL  AGF++ TVD D V+V YP    +M  LQGMGESN A N RP + R+T+LAAAA Y+E+YG++DG++ ATF ++YMIGW PHESQ +P +RGS  A  GD++
Sbjct:  113 VERLFLTDISERSLKQ------TRQ--------------TEIPTRCVLADEEFLPFKENTFDLVVSSLSLHWINDLPGALKQIQQVLKPDGVFIGAMVGGETLYELRCALQLAETEREGGFSPHISPYTAVTDLGNLLGQAGFTMLTVDIDEVQVHYPGIIEVMTDLQGMGESNCAWNRRPLLHRDTVLAAAAVYKEMYGDEDGSIPATFDILYMIGWKPHESQSKPAKRGSATASFGDLS 333          
BLAST of mRNA_E-fasciculatus_F_contig1365.2707.1 vs. uniprot
Match: A0A3B5BFY7_9TELE (NADH:ubiquinone oxidoreductase complex assembly factor 5 n=2 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B5BFY7_9TELE)

HSP 1 Score: 255 bits (651), Expect = 1.540e-74
Identity = 138/256 (53.91%), Postives = 168/256 (65.62%), Query Frame = 1
Query:  661 GGIGGV-EHLTQCDISEKALLRGASSSRSRQEEGRGGAAAGKEGSVEVDTCCVVADEEFLPFAPASFDLVLSNLALHWVNDLPGALGQIKQVLKPDGAFIGAMLGGSTLTELRSCLLLAEQEREGGQSIHTSPSAHVADCGSLLQSAGFSLPTVDQDTVRVGYPNAFVLMEHLQGMGESNAAVNTRPRVSRETMLAAAAAYQELYGEDDGTVQATFQVVYMIGWAPHESQPQPKRRGSGQARIGDVTVTQSNPPEV 1425
            GG G + +HL Q D+ +   L   S    +Q               E+ T CV+ DEEFLPF   +FDLVLS+L+LHW+NDLPGAL QI+QVLKPDG FIGAM+GG TL ELR  L LAE EREGG S H SP   V D G+LL  AGFS+ TVD D V+V YP    +M  LQGMGESN A N R  + R+TMLAAAA Y+E+YG  DG+V ATF+++YMIGW PHESQ +P +RGS     GD++   S PP+ 
Sbjct:   98 GGRGHIAQHLNQ-DVVQSLFLTDVSQQHLKQSR-----------RTEIPTRCVMVDEEFLPFKENTFDLVLSSLSLHWINDLPGALRQIQQVLKPDGVFIGAMVGGETLYELRCSLQLAESEREGGFSAHVSPFTAVTDLGNLLGRAGFSMLTVDVDEVQVHYPGMMEVMTDLQGMGESNCAWNRRSLLHRDTMLAAAAIYKEMYGNQDGSVPATFEILYMIGWKPHESQTKPAKRGSATVSFGDLSKI-SQPPDA 340          
BLAST of mRNA_E-fasciculatus_F_contig1365.2707.1 vs. uniprot
Match: A0A3Q1GVJ8_9TELE (NADH:ubiquinone oxidoreductase complex assembly factor 5 n=3 Tax=Pomacentridae TaxID=30863 RepID=A0A3Q1GVJ8_9TELE)

HSP 1 Score: 254 bits (648), Expect = 3.820e-74
Identity = 128/202 (63.37%), Postives = 149/202 (73.76%), Query Frame = 1
Query:  793 VEVDTCCVVADEEFLPFAPASFDLVLSNLALHWVNDLPGALGQIKQVLKPDGAFIGAMLGGSTLTELRSCLLLAEQEREGGQSIHTSPSAHVADCGSLLQSAGFSLPTVDQDTVRVGYPNAFVLMEHLQGMGESNAAVNTRPRVSRETMLAAAAAYQELYGEDDGTVQATFQVVYMIGWAPHESQPQPKRRGSGQARIGDVT 1398
             EV T CVV DEEFLPF   +FDLVLS+L+LHW+NDLPG L QI+QVLKPDG FIGAM+GG TL ELR  L LAE EREGG S H SP   V D G+LL  AGFSL TVD D V+V YP    +M  LQGMGESN A N R  + R+TMLAAAA Y+E+YG  DG+V ATF+++YMIGW PHESQ +P +RGS  A  GD++
Sbjct:  128 TEVPTRCVVVDEEFLPFKENTFDLVLSSLSLHWINDLPGVLRQIQQVLKPDGVFIGAMVGGDTLYELRCSLQLAESEREGGFSAHVSPFTAVTDLGNLLGGAGFSLLTVDVDEVQVHYPGMMEVMTDLQGMGESNCAWNRRSLLHRDTMLAAAAVYREMYGNQDGSVPATFEILYMIGWKPHESQAKPAKRGSATASFGDLS 329          
BLAST of mRNA_E-fasciculatus_F_contig1365.2707.1 vs. uniprot
Match: A0A6P7IBU6_9TELE (arginine-hydroxylase NDUFAF5, mitochondrial isoform X1 n=2 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7IBU6_9TELE)

HSP 1 Score: 254 bits (648), Expect = 3.820e-74
Identity = 134/241 (55.60%), Postives = 163/241 (67.63%), Query Frame = 1
Query:  676 VEHLTQCDISEKALLRGASSSRSRQEEGRGGAAAGKEGSVEVDTCCVVADEEFLPFAPASFDLVLSNLALHWVNDLPGALGQIKQVLKPDGAFIGAMLGGSTLTELRSCLLLAEQEREGGQSIHTSPSAHVADCGSLLQSAGFSLPTVDQDTVRVGYPNAFVLMEHLQGMGESNAAVNTRPRVSRETMLAAAAAYQELYGEDDGTVQATFQVVYMIGWAPHESQPQPKRRGSGQARIGDVT 1398
            VE L   DIS++A+ RG      RQ               E+ T C++ADEEFLPF   +FDLV+S+L LHW+NDLPGAL QI QVLKPDG FIGAM+GG TL ELR  L LAE EREGG S H SP   V D G+LL  AGF++ TVD D V+V YP    +M  LQGMGESN A N R  + R+TMLAAAA Y+E+YG +DG++ ATF+++YMIGW PHESQ +P RRGS     GD++
Sbjct:  109 VERLFLTDISQQAVRRG------RQ--------------TEIPTHCILADEEFLPFRENTFDLVVSSLVLHWINDLPGALRQIHQVLKPDGVFIGAMVGGETLYELRCSLQLAETEREGGFSPHVSPYTAVTDLGNLLGQAGFNMLTVDIDDVQVHYPGIMEVMTDLQGMGESNCAWNRRSLLHRDTMLAAAAVYKEMYGNEDGSIPATFEILYMIGWKPHESQAKPARRGSATTSFGDLS 329          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1365.2707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKB8_ECTSI1.340e-17297.71Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A4D9D585_9STRA6.140e-9562.35Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A835Z106_9STRA2.270e-9262.21S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A667XQM2_9TELE1.580e-7654.40NADH:ubiquinone oxidoreductase complex assembly fa... [more]
A0A024G8D9_9STRA3.160e-7554.37Methyltransf_11 domain-containing protein n=1 Tax=... [more]
F0WBY4_9STRA5.800e-7553.63Uncharacterized protein AlNc14C54G4171 n=1 Tax=Alb... [more]
A0A3Q3GAM7_9LABR1.130e-7455.60Arginine-hydroxylase NDUFAF5, mitochondrial-like n... [more]
A0A3B5BFY7_9TELE1.540e-7453.91NADH:ubiquinone oxidoreductase complex assembly fa... [more]
A0A3Q1GVJ8_9TELE3.820e-7463.37NADH:ubiquinone oxidoreductase complex assembly fa... [more]
A0A6P7IBU6_9TELE3.820e-7455.60arginine-hydroxylase NDUFAF5, mitochondrial isofor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1365contigE-fasciculatus_F_contig1365:179..4747 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score308.9
Seed ortholog evalue1.3e-81
Seed eggNOG ortholog2880.D8LKB8
KEGG koko:K18162
KEGG Pathwayko04714,map04714
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006996,GO:0007005,GO:0008150,GO:0009314,GO:0009416,GO:0009453,GO:0009605,GO:0009628,GO:0009653,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010257,GO:0010506,GO:0010507,GO:0016043,GO:0019222,GO:0022607,GO:0030154,GO:0030435,GO:0030587,GO:0031154,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0032502,GO:0032981,GO:0033108,GO:0034622,GO:0040011,GO:0042330,GO:0042331,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0043934,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0048519,GO:0048523,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051703,GO:0051704,GO:0065003,GO:0065007,GO:0071840,GO:0090702,GO:0099120
EggNOG free text desc.peptidyl-arginine hydroxylation
EggNOG OGsCOG0500@1,KOG2940@2759
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029
Hectar predicted targeting categoryother localisation
Exons6
Model size2346
Cds size465
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1365.2707.1prot_E-fasciculatus_F_contig1365.2707.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1365 1610..3829 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927861.1831863-UTR-E-fasciculatus_F_contig1365:178..11081622927861.1831863-UTR-E-fasciculatus_F_contig1365:178..1108Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1365 179..1108 +
1695995727.5174212-UTR-E-fasciculatus_F_contig1365:178..11081695995727.5174212-UTR-E-fasciculatus_F_contig1365:178..1108Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1365 179..1108 +
1622927861.2017844-UTR-E-fasciculatus_F_contig1365:1576..16091622927861.2017844-UTR-E-fasciculatus_F_contig1365:1576..1609Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1365 1577..1609 +
1695995727.5324202-UTR-E-fasciculatus_F_contig1365:1576..16091695995727.5324202-UTR-E-fasciculatus_F_contig1365:1576..1609Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1365 1577..1609 +
1622927861.2958503-UTR-E-fasciculatus_F_contig1365:3829..47471622927861.2958503-UTR-E-fasciculatus_F_contig1365:3829..4747Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1365 3830..4747 +
1695995727.5856829-UTR-E-fasciculatus_F_contig1365:3829..47471695995727.5856829-UTR-E-fasciculatus_F_contig1365:3829..4747Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1365 3830..4747 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927861.2198758-CDS-E-fasciculatus_F_contig1365:1609..16751622927861.2198758-CDS-E-fasciculatus_F_contig1365:1609..1675Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1365 1610..1675 +
1695995727.544151-CDS-E-fasciculatus_F_contig1365:1609..16751695995727.544151-CDS-E-fasciculatus_F_contig1365:1609..1675Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1365 1610..1675 +
1622927861.2333648-CDS-E-fasciculatus_F_contig1365:2080..22301622927861.2333648-CDS-E-fasciculatus_F_contig1365:2080..2230Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1365 2081..2230 +
1695995727.5526643-CDS-E-fasciculatus_F_contig1365:2080..22301695995727.5526643-CDS-E-fasciculatus_F_contig1365:2080..2230Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1365 2081..2230 +
1622927861.2476492-CDS-E-fasciculatus_F_contig1365:2455..25401622927861.2476492-CDS-E-fasciculatus_F_contig1365:2455..2540Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1365 2456..2540 +
1695995727.5610394-CDS-E-fasciculatus_F_contig1365:2455..25401695995727.5610394-CDS-E-fasciculatus_F_contig1365:2455..2540Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1365 2456..2540 +
1622927861.261709-CDS-E-fasciculatus_F_contig1365:3170..32831622927861.261709-CDS-E-fasciculatus_F_contig1365:3170..3283Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1365 3171..3283 +
1695995727.5695093-CDS-E-fasciculatus_F_contig1365:3170..32831695995727.5695093-CDS-E-fasciculatus_F_contig1365:3170..3283Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1365 3171..3283 +
1622927861.278928-CDS-E-fasciculatus_F_contig1365:3778..38291622927861.278928-CDS-E-fasciculatus_F_contig1365:3778..3829Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1365 3779..3829 +
1695995727.5775666-CDS-E-fasciculatus_F_contig1365:3778..38291695995727.5775666-CDS-E-fasciculatus_F_contig1365:3778..3829Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1365 3779..3829 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1365.2707.1

>prot_E-fasciculatus_F_contig1365.2707.1 ID=prot_E-fasciculatus_F_contig1365.2707.1|Name=mRNA_E-fasciculatus_F_contig1365.2707.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=155bp
MLGGSTLTELRSCLLLAEQEREGGQSIHTSPSAHVADCGSLLQSAGFSLP
TVDQDTVRVGYPNAFVLMEHLQGMGESNAAVNTRPRVSRETMLAAAAAYQ
ELYGEDDGTVQATFQVVYMIGWAPHESQPQPKRRGSGQARIGDVTVTQSN
PPEV*
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mRNA from alignment at E-fasciculatus_F_contig1365:179..4747+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1365.2707.1 ID=mRNA_E-fasciculatus_F_contig1365.2707.1|Name=mRNA_E-fasciculatus_F_contig1365.2707.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4569bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1365:179..4747+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TGCAGAAGTTTTTTTCCCACGACAACGCAAGTCTGTCAACCGCGCGCGCG CGTTTTCTGAGCGCGTGAGGTTTTTCAAGCGCTCGCGGGTGTGTTTGGTT CTACCCCGTTTTCCTGCGTGCGTTCAAAGAATCCTACGTAGCACGCCCAT GTCGTCCTGGGAACGCCACCAAACCAGGGCGACAGATAGATGTGAATTTA TTTTCTACGCGTCCACAGAACCGGAAAACACTGCCTGTTGATCATCAACG CCATGTAGATTTCCATGTGGGCAACACCGTGGGTTTATTTGGGATGCTCC GAATCAATCTGTGGGACACCGGTCTGGTTGACACTTCTCAGAGAAGAGCA CGAAAATGACACCAGTTTCCCCCCCCCGTAATCCCAGCCAAAAAAGGTCG TGGCTCGCTGGTCTCTTATCGGTTCAGTTCAGCGTAGTATTCTGTCTTGG CGAGAGCACTTCGCCGAATTAGTTCGGCGCGTTGTTCACGCCGTACGTTA AGCTGAACGTCGAGCTGCGGATATTTGCGAAGCGTGAGCGAAGCGTGAGC GAATCAAACCCGCACCACACAATCTCCGCCGACTACACACGCATCCCACA CCGCCGTACACGGGGCTAAAAAAACAAAAACAAAAAACGCAGCCGGGGTT GAACGGCAAGGGCGGGATCGGGGGCGTCGAGCACTTGACGCAGTGCGACA TATCCGAGAAGGCCTTGCTAAGGGGGGCCAGCTCCAGCCGTTCCCGGCAA GAAGAAGGTCGTGGGGGGGCAGCGGCGGGGAAGGAAGGGTCTGTGGAGGT TGACACCTGCTGCGTAGTAGCGGACGAGGAATTCTTGCCGTTCGCCCCGG CGTCTTTCGACCTCGTCCTGAGCAACCTGGCTTTGCACTGGGTTAACGAT CTGCCCGGCGCGCTGGGGCAAATCAAGCAGGTTTGGGCCGTTGTTGCGTG CCTCAAATATGTCATTTCTCTCTCTCCCTCACTCTGTCGCTGATGTCAAG TTCGCACTTGGTGTTCTGGAAGCTATGCCACATGTGTTGTCTTCATCAGA CCGTGGGCGTATGTAGTGGGTTGTCCTCGGGACTGTTCCAAGTCGTATCT GTGCATGAACATGGAGGAATTGCTAAACGCTATTGCCGGTAGATAGAAGC AGTGCACGGGTTGGAGTATGAAGGAATGACAAGCATGGGTGCTCAAATGT TGGTGCTGTCATCGCCTCCCGCTACAAAGCAAAGCAGCAGGTTCTTCTTC CCATGCTGTACCCCCCGCATTCAGTGCTCACAGCACCAAGACCAACGTAC ACCAACCGCGAGGAGTAGCTCCGTCCCTCCATCCTTCTTCCTGTTTCCAT TACTTCTTCGATTTCCGGTCGCATCCGTACTCTTGCCTTTTTGTCCAGGT TCTCAAACCAGACGGAGCATTCATCGGTGCGATGCTCGGAGGCTCGACGC TGACAGAGTTGCGGAGCTGTCTTCTCCTCGCCGAGCAGGAGCGAGAGGTC AGTGCACAGCAATCACGGCCGGTAGGCTACATGGTATATGCGGTGTTGGT TAAGTGTGCGCGTGTTTAACCATGTATGGGATGCGCACGTGGTTCCATCG GCGTGTGTTGTATGAGTTGATTAGCGATCAATCCTGCTGTTCTGCTGAAA CACGACCAATCTAGCGAACAATCCTGCTCTACTGCTGAAGCACGAACAAT CCAGCGAACAATCCAGCGAACAAGCCTGCTCTACTAATCTAGCGAACAAT CCTGCTCTACTGCTGAAACACAACCAATCGTTACCCTGTCACCACCCCCG TGTAGTGCACTTTGGGCGCCACATGTCGACCGTGCTTTGGGCGATACGCA TGTTGCCGCCGCCATGTCTCGTCGTGCAAAAATAACGAAAAAATGTTGGC AGGGAGGCCAGTCCATTCACACGTCCCCGTCTGCGCACGTGGCGGACTGC GGGAGCCTGCTGCAATCCGCGGGGTTCTCGCTGCCCACCGTGGACCAGGA CACCGTCCGGGTGGGATACCCGAACGCCTTCGTCTTGATGGAACACTTAC AGGTGATGGGGGGGGGGGCACATGCGAGTGTCGAATGACAACCCTTAGGT GTTTGCTTCCGGTCCGAACGTGCGAGTGTCCTCTCTCCTCGGACGTGGTG TTTTCGTTCAAATGTTCCCAAGAACAGTCTCTATGTCTTTTGCAGCGAGA GCGTGTCTTGGGTGGTGATGGTTGTTGTTTTCTTGTCGACCCCCCCCCGC CCCGCCCCGTCTCCTTCTTATGTGCAGGGGATGGGCGAGTCAAACGCCGC CGTCAACACCCGGCCACGGGTCAGCAGAGAAACCATGCTCGCGGCAGCGG CGGCGTACCAAGGTAAGCACATCCTTAACCGACCGACCGCCGCGCGGGGG TATTTTTTCGGCGGGCGCGCAAGCGGTAGCCGCCCCCGTGAGCAGGAACA CACTCGACATCGGCGTCACCGGAACGCATATGTTCATGGACCCAATCGCA GCTTTTTTTTTTGCGTTTCGGCCGCGCCTGCTTGACTTCGGAGTGGATGG TGTAAGCGAGCTATCGCAACACCGTTTCGCGCGTGTGCCTCTCCGAGAAA ATGCCGTCTTCAAGATAGTTGTGTATTTGTACCACCTTCTACTCCCTGAG GAGATGATTTTCTGTCGCTTCCTTCGTTCTTTGTACAAGTATGTATCGCT TCGGTGCGGAAGTCATCGGTAGGTTAGCAGGCTTGAATCGCGTGCTAAAG GTTTCCCCCCAAAACACATCGTGTTGACAGGCTACAGCTCTTTCGCATCC ACCCCCCGCGGAACGTCAAAAGCTCTCGGCAGTCTAGGTAACAATGAAAA GGGTCCTTGAGGGAAGCTTGCTTCCTCGATACGCTTGGATGGTTTTGATA ATGTCTCCCTGACCTCTTCGGTATTCACTCCCTTGCCTCTCGTTGTTCTA CCCCTTTTCTGCGGCCCCGTTCATCGAATTGGCGGTTTCAAGAGCTGTAC GGAGAAGACGACGGCACCGTGCAGGCCACCTTCCAGGTGGTGTACATGAT CGGGTGGGCGCCGCACGAGTCTCAGCCACAGCCGAAGCGGAGAGGTTCCG GCCAGGTGAAGATCAGATCGAAACTACCATGCATAGACAAGGAAGAATGC CTGAAAACGTTACCACAAGTCTAGAGTGTGGCTACCCTATGGTCGATCCA CGACGCTTTGGTTGTCCTCTTATCCCACCGCTGCCCTCGCGTTCTTTGGG CATCTGTGTACCGTTGGCATGGTTCGTACCGTACCGTACCGTACCGTACC GTACCGTACCGCCGTATCTAGCACAACCTGAGCCTGCTGTGGCTGTGACC TTTTGCTCGATATTCGAGGTACCCGCTTGAAAGCAGGCCGAAAACTGTTC CCCACGGTCAGAAATGGGTTTGAAGTCCGAGGCACTTGGATATGCCTTCC ATTCTCGGGGATGGCAACTCTAACTCTCTCGTCGGGTCCAGCACATACGA CCCTTGGGCGATTTCTCATCTCGACCTATCTTTTCTCCCCCGCGTCCTCT TCCTTTGCACTCCTGTCCGTCTCTACCAACCACGCACCCCGGTCTCACAG GCGAGAATTGGCGATGTCACCGTGACGCAGTCGAACCCCCCTGAGGTCTA AGATGGTCGGGCCACGCGGGCCACCTGATGACTCGTTGCTTTCGATTGTT GGCTTTCGCCGGCGCTGAGGATGGGCGTAGTTGGAAGAGGAAGGACGATC GATCGGCGCACCCTCTCTTGTATGTATCCGTGACCACGCCTAGGGGGCAC ACTTTAGCGTTAGCGTTACGGCAAAGTTGTTTGACGGCTGGCTTGTCGAC GCATTACAGCCGAAGTAGGTGCTGTTGCGAACGTCGCGTATCTCCACGAG AGCGTGTTAGTTTAGCGGGAACTGCGCCACAGGGGGCTGGGGAGGGTAAG AACCAGTGGCTTTTCGTACGTTTACCCTTGGAAACTTGATTCAAGCTTGG TGGTGTCGCGAAAAGACAAGGAGATGCATCAGAGAAGAGGCAAGCCAACG CGCAGGGGTTGACGCCCGAGTTGGGGCGGCTTTGTGAAAAAGGGTGCGTG CACCGTAACCCCCTGTGGGCAAGTTGTTTTATGGGATAAAACCCTGTCGG TATCCCCTTGTGCGAATCCCGGGGCGGTCGTGGGGGCAATGTCCGCAACC GCGTTCAGAAATGCTCTCGGGGGCTGTTTTGGAAGATCAATCGGATCAAT CCCCGCCAAGCTTTGATCGAGGCAAAGGCCGCCGAAACACCAACAACGTC GAAAAGGTGATTGGATCGTATTTCGAGTATTTCGCTGCCATCCTGTGGTC GCGGATCCAGTTGTAGAAGTTGACACCCAACCAGCAAGACATTCGACTTC CATCATGATGAGCGCTATTTCACGGGTGCATGTGGACTAGATGTGTTGAC CGATGTAGAGTCGAGTGGACGGAACATTAACATTTCTCCCGCTCCAGAAC AACAAATAGGTACTTGTATTGTTGTTGTTTTACAAGGACAATGTCCCGGA AGAAGATCGAACATCATGG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1365:179..4747+

>mRNA_E-fasciculatus_F_contig1365.2707.1 ID=mRNA_E-fasciculatus_F_contig1365.2707.1|Name=mRNA_E-fasciculatus_F_contig1365.2707.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=930bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1365:179..4747+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCTCGGAGGCTCGACGCTGACAGAGTTGCGGAGCTGTCTTCTCCTCGC
CGAGCAGGAGCGAGAGATGCTCGGAGGCTCGACGCTGACAGAGTTGCGGA
GCTGTCTTCTCCTCGCCGAGCAGGAGCGAGAGGGAGGCCAGTCCATTCAC
ACGTCCCCGTCTGCGCACGTGGCGGACTGCGGGAGCCTGCTGCAATCCGC
GGGGTTCTCGCTGCCCACCGTGGACCAGGACACCGTCCGGGTGGGATACC
CGAACGCCTTCGTCTTGATGGAACACTTACAGGGAGGCCAGTCCATTCAC
ACGTCCCCGTCTGCGCACGTGGCGGACTGCGGGAGCCTGCTGCAATCCGC
GGGGTTCTCGCTGCCCACCGTGGACCAGGACACCGTCCGGGTGGGATACC
CGAACGCCTTCGTCTTGATGGAACACTTACAGGGGATGGGCGAGTCAAAC
GCCGCCGTCAACACCCGGCCACGGGTCAGCAGAGAAACCATGCTCGCGGC
AGCGGCGGCGTACCAAGGGGATGGGCGAGTCAAACGCCGCCGTCAACACC
CGGCCACGGGTCAGCAGAGAAACCATGCTCGCGGCAGCGGCGGCGTACCA
AGAGCTGTACGGAGAAGACGACGGCACCGTGCAGGCCACCTTCCAGGTGG
TGTACATGATCGGGTGGGCGCCGCACGAGTCTCAGCCACAGCCGAAGCGG
AGAGGTTCCGGCCAGAGCTGTACGGAGAAGACGACGGCACCGTGCAGGCC
ACCTTCCAGGTGGTGTACATGATCGGGTGGGCGCCGCACGAGTCTCAGCC
ACAGCCGAAGCGGAGAGGTTCCGGCCAGGCGAGAATTGGCGATGTCACCG
TGACGCAGTCGAACCCCCCTGAGGTCTAAGCGAGAATTGGCGATGTCACC
GTGACGCAGTCGAACCCCCCTGAGGTCTAA
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