mRNA_E-fasciculatus_F_contig13642.2703.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13642.2703.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 209 bits (533), Expect = 3.920e-62 Identity = 104/145 (71.72%), Postives = 118/145 (81.38%), Query Frame = 1
Query: 1 GGSKCLDAFILALNQAGDGQQKWWYVSTLELQLASLELCGACRSAQVLDVRIDEDTPPTLWSSRTSHTTPTQRSPDVCISNRVPAVQAVGWTWEISMDRLPQRAASELQPGPERRRANGHALAASVGSVIWPPSLKRLIFFSYIP 435
GG LD I+ALNQA DGQ+K WYVSTLELQL SLELCGACRSAQ+L V + EDTPPTLWSSRTS TTP+QRSP+VC SNRVPAVQA+ WTW + MDRLPQRAA+E QP ERR +GH+ AASV SV+WP SLKRL+F +P
Sbjct: 85 GGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRLVFSRRMP 229
BLAST of mRNA_E-fasciculatus_F_contig13642.2703.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 181 bits (458), Expect = 7.860e-47 Identity = 95/172 (55.23%), Postives = 118/172 (68.60%), Query Frame = 1
Query: 1 GGSKCLDAFILALNQAGDGQQKWWYVSTLELQLASLELCGACRSAQVLDVRIDEDTPPTLWSSRTSHTTPTQRSPDVCISNRVPAVQAVGWTWEISMDRLPQRAASELQPGPERRRANGHALAASVGSVIWPPSLKRLIFFSYIPTSTS--PESLQEQSRRDAHNRPIHSVV 510
G SKCLDAF++ALNQA DGQ+K WYVSTLELQL SLE+CGACR Q L VR+ TPP+LW +HTT RSP VCIS+RVP VQA G TW + M L QR+A+E++ G RRAN H+ AAS+ S +WP LKR++F S + +T+ P SLQ+ S N+ I V
Sbjct: 5 GNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTVNTASWPASLQQLSFGCGFNQAIVGVA 176
BLAST of mRNA_E-fasciculatus_F_contig13642.2703.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 159 bits (403), Expect = 6.480e-40 Identity = 89/168 (52.98%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 1 GGSKCLDAFILALNQAGDGQQKWWYVSTLELQLASLELCGACRSAQVLDVRIDEDTPPTLWSSRTSHTTPTQRSPDVCISNRVPAVQAVGWTWEISMDRLPQRAASELQPGPERRRANGHALAASVGSVIWPPSLKRLIFFSY--IPTSTSPESLQEQSRRDAHNRPI 498
G S+CLDAFI+AL QAGDG+ K WYVSTLELQL SLE CGACRSA DV+I TP +LWS R SH T +RS + CI +RVPAVQA GW W + M+ L R+A+EL E R+ G + A S G + W L RL+F+S + + + P LQE S D N+PI
Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYSERSVNSVSWPACLQELSFGDFFNQPI 192
BLAST of mRNA_E-fasciculatus_F_contig13642.2703.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 154 bits (389), Expect = 3.400e-39 Identity = 84/158 (53.16%), Postives = 107/158 (67.72%), Query Frame = 1
Query: 1 GGSKCLDAFILALNQAGDGQQKWWYVSTLELQLASLELCGACRSAQVLDVRIDEDTPPTLWSSRTSHTTPTQRSPDVCISNRVPAVQAVGWTWEISMDRLPQRAASELQPGPERRRANGHALAASVGSVIW-PPSLKRLIFFSYIPTSTS--PESLQE 465
G S+CL AFI+ALNQ +GQ+K WY STLELQL SLE CGACR L VR+D TP +LWS SH T +RS + C+SNRVPAVQA G TW + M+ L Q +A EL+ + RR +G++ AS+GS+ W LKRL+F S +P ST+ P SL +
Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPASTASWPASLPQ 170
BLAST of mRNA_E-fasciculatus_F_contig13642.2703.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 138 bits (347), Expect = 5.360e-32 Identity = 69/141 (48.94%), Postives = 100/141 (70.92%), Query Frame = 1
Query: 7 SKCLDAFILALNQAGDGQQKWWYVSTLELQLASLELCGACRSAQVLDVRIDEDTPPTLWSSRTSHTTPTQRSPDVCISNRVPAVQAVGWTWEISMDRLPQRAASELQPGPERRRANGHALAASVGS-VIWPPSLKRLIFFS 426
++CLDAF++AL+QA +G +K WY STLELQL SL+LC ACR+ +L V +D+ TP +LWSSRT+ T P RS ++ IS+RVP V+A+ TW +SM+ L ++AA EL ER G + +S+GS V+WP L +L+ ++
Sbjct: 9 TRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYT 149
BLAST of mRNA_E-fasciculatus_F_contig13642.2703.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 120 bits (301), Expect = 1.730e-26 Identity = 65/136 (47.79%), Postives = 84/136 (61.76%), Query Frame = 1
Query: 10 KCLDAFILALNQAGDGQQKWWYVSTLELQLASLELCGACRSAQVLDVRIDEDTPPTLWSSRTSHTTPTQRSPDVCISNRVPAVQAVGWTWEISMDRLPQRAASELQPGPERRRANGHALAASVGSVIWPPSLKRLI 417
+CLDAF++AL+Q +G +K WY STL+LQLASLE CGACRS +L V +D +TPPTLWS Q +P S RVPAVQAVG TW + A+SEL E + A++ SV+WP L+RL+
Sbjct: 8 RCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSLG-------QANPTAGTSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLV 136
BLAST of mRNA_E-fasciculatus_F_contig13642.2703.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 4.000e-20 Identity = 46/72 (63.89%), Postives = 53/72 (73.61%), Query Frame = 1
Query: 7 SKCLDAFILALNQAGDGQQKWWYVSTLELQLASLELCGACRSAQVLDVRIDEDTPPTLWSSRTSHTTPTQRS 222
SKCLDAF++ALNQ DGQ+K WY STLELQL SLE CGACR L VR+D TP +LWS RT+ T +RS
Sbjct: 39 SKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTTPITAHKRS 110
BLAST of mRNA_E-fasciculatus_F_contig13642.2703.1 vs. uniprot
Match: A0A6H5JSE5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSE5_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 7.380e-18 Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 1
Query: 1 GGSKCLDAFILALNQAGDGQQKWWYVSTLELQLASLELCGACRSAQVLDVRIDEDTPPTLWSSRTSHTTPTQRSP------DVCISNRVPAVQAVGWT 276
G SKCLDAFI+ +NQA DG+++ WY STLELQL SL CGACRSA++L + +D PP+LW S+TTP +R DV ++ V A + WT
Sbjct: 971 GKSKCLDAFIVTMNQAADGRKQQWYASTLELQLVSLAFCGACRSAKMLHLHVDRGKPPSLWFPHKSYTTPNKRIAASRVWFDVGAADGVSAAEFCHWT 1068
BLAST of mRNA_E-fasciculatus_F_contig13642.2703.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 2.420e-17 Identity = 62/166 (37.35%), Postives = 81/166 (48.80%), Query Frame = 1
Query: 1 GGSKCLDAFILALNQAGDGQQKWWYVSTLELQLASLELCGACRSAQVLDVRIDEDTPPTLWSSRTSHTTPTQRSPDVC----------------------------ISNRVPAVQAVGWTWEISMDRLPQRAASELQPGPERRRANGHALAASVGSVIWPPSLKRL 414
G S+ DA I+A++QA +G+ K WY STLEL+LASLE C ACR + VR+D +TPP+LWS T RS IS+RVP QA+G TW + + L Q A EL E + + + SV WP +LKRL
Sbjct: 5 GASRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDLVSVAWPQNLKRL 170
BLAST of mRNA_E-fasciculatus_F_contig13642.2703.1 vs. uniprot
Match: A0A6H5JHB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHB0_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 1.420e-14 Identity = 59/159 (37.11%), Postives = 80/159 (50.31%), Query Frame = 1
Query: 1 GGSKCLDAFILALNQAGDGQQKWWYVSTLELQLASLELCGACRSAQVLDVRIDEDTPPTLWSSRTSHTTPTQRSPDVCISNRVPAVQAVGWTW------EISMD------------RLPQRAASELQPG-PERRRANGHALAASVGSVIWPPSLKRLIF 420
GGS+CLDAF + L+QA G++ WY STL+LQ L LC ACRS VRID+ TP +LW P+V S+RVP V + TW + +D RL +R S +P P+ R ++ + S WPPSL++L F
Sbjct: 139 GGSRCLDAFAITLHQAYGGRRGHWYKSTLQLQCVCLALCSACRSVPTWHVRIDDQTPHSLWD------------PNVRTSSRVPVVLGLRLTWVYGRMNDFVLDTGDRQWKFLEVLRL-ERFKSRSRPHRPKPRLVFDQEESSFLSSTAWPPSLRQLEF 284 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13642.2703.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13642.2703.1 >prot_E-fasciculatus_F_contig13642.2703.1 ID=prot_E-fasciculatus_F_contig13642.2703.1|Name=mRNA_E-fasciculatus_F_contig13642.2703.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=417bp GGSKCLDAFILALNQAGDGQQKWWYVSTLELQLASLELCGACRSAQVLDVback to top mRNA from alignment at E-fasciculatus_F_contig13642:1769..3019- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13642.2703.1 ID=mRNA_E-fasciculatus_F_contig13642.2703.1|Name=mRNA_E-fasciculatus_F_contig13642.2703.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1251bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13642:1769..3019- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13642:1769..3019- >mRNA_E-fasciculatus_F_contig13642.2703.1 ID=mRNA_E-fasciculatus_F_contig13642.2703.1|Name=mRNA_E-fasciculatus_F_contig13642.2703.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2502bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13642:1769..3019- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |