prot_E-fasciculatus_F_contig13640.2701.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13640.2701.1
Unique Nameprot_E-fasciculatus_F_contig13640.2701.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length40
Homology
BLAST of mRNA_E-fasciculatus_F_contig13640.2701.1 vs. uniprot
Match: D8LCZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCZ5_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.290e-19
Identity = 38/40 (95.00%), Postives = 40/40 (100.00%), Query Frame = 0
Query:    1 PKVDIPRAGDIVVRGPDWAWGEQDGDAAGRGLVVGLATWG 40
            PKVD+PRAGD+VVRGPDWAWGEQDGDAAGRGLVVGLATWG
Sbjct: 1899 PKVDLPRAGDVVVRGPDWAWGEQDGDAAGRGLVVGLATWG 1938          
BLAST of mRNA_E-fasciculatus_F_contig13640.2701.1 vs. uniprot
Match: A0A6H5KT07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT07_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 3.280e-19
Identity = 37/40 (92.50%), Postives = 40/40 (100.00%), Query Frame = 0
Query:    1 PKVDIPRAGDIVVRGPDWAWGEQDGDAAGRGLVVGLATWG 40
            PKVD+PRAGD+VVRGPDWAWGEQDGD+AGRGLVVGLATWG
Sbjct: 1932 PKVDLPRAGDVVVRGPDWAWGEQDGDSAGRGLVVGLATWG 1971          
BLAST of mRNA_E-fasciculatus_F_contig13640.2701.1 vs. uniprot
Match: X6MXB3_RETFI (MIB/HERC2 domain-containing protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MXB3_RETFI)

HSP 1 Score: 50.1 bits (118), Expect = 4.180e-6
Identity = 19/31 (61.29%), Postives = 23/31 (74.19%), Query Frame = 0
Query:    9 GDIVVRGPDWAWGEQDGDAAGRGLVVGLATW 39
            GD+VVRGPDW WG+QDG    +G+V GL  W
Sbjct:   94 GDLVVRGPDWKWGDQDGKPGMKGIVRGLRQW 124          
BLAST of mRNA_E-fasciculatus_F_contig13640.2701.1 vs. uniprot
Match: UPI001403D07D (E3 ubiquitin-protein ligase MIB2-like n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001403D07D)

HSP 1 Score: 47.0 bits (110), Expect = 7.980e-5
Identity = 16/29 (55.17%), Postives = 21/29 (72.41%), Query Frame = 0
Query:   11 IVVRGPDWAWGEQDGDAAGRGLVVGLATW 39
            +V+RGPDW WG QDG   G+GLV+ +  W
Sbjct:  152 VVIRGPDWKWGNQDGGEGGKGLVLTIKGW 180          
BLAST of mRNA_E-fasciculatus_F_contig13640.2701.1 vs. uniprot
Match: S4RTC7_PETMA (RING-type E3 ubiquitin transferase n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RTC7_PETMA)

HSP 1 Score: 47.0 bits (110), Expect = 7.990e-5
Identity = 16/29 (55.17%), Postives = 21/29 (72.41%), Query Frame = 0
Query:   11 IVVRGPDWAWGEQDGDAAGRGLVVGLATW 39
            +V+RGPDW WG QDG   G+GLV+ +  W
Sbjct:  149 VVIRGPDWKWGNQDGGEGGKGLVLTIKGW 177          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13640.2701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LCZ5_ECTSI1.290e-1995.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT07_9PHAE3.280e-1992.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
X6MXB3_RETFI4.180e-661.29MIB/HERC2 domain-containing protein (Fragment) n=1... [more]
UPI001403D07D7.980e-555.17E3 ubiquitin-protein ligase MIB2-like n=1 Tax=Petr... [more]
S4RTC7_PETMA7.990e-555.17RING-type E3 ubiquitin transferase n=1 Tax=Petromy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037252Mib/herc2 domain superfamilyGENE3D2.30.30.920coord: 3..40
e-value: 5.3E-8
score: 34.3
IPR037252Mib/herc2 domain superfamilySUPERFAMILY159034Mib/herc2 domain-likecoord: 7..40
IPR010606Mib-herc2PROSITEPS51416MIB_HERC2coord: 1..40
score: 13.328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13640contigE-fasciculatus_F_contig13640:2293..2412 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13640.2701.1mRNA_E-fasciculatus_F_contig13640.2701.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13640 2293..2412 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13640.2701.1 ID=prot_E-fasciculatus_F_contig13640.2701.1|Name=mRNA_E-fasciculatus_F_contig13640.2701.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=40bp
PKVDIPRAGDIVVRGPDWAWGEQDGDAAGRGLVVGLATWG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010606Mib_Herc2
IPR037252Mib_Herc2_sf