mRNA_E-fasciculatus_F_contig1364.2700.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1364.2700.1 vs. uniprot
Match: D8LIF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF8_ECTSI) HSP 1 Score: 287 bits (734), Expect = 4.500e-95 Identity = 148/162 (91.36%), Postives = 152/162 (93.83%), Query Frame = 3
Query: 90 MDLTVAESHGGGSGGGINTNDGATPTTPMTETGEHQRTSASAGAAAGGMQLQAGGQGVYGREEVSALKGIFNLYDAENTGTIGVKELEGILQKVGHNPDDVARVMAAAANTEAGMDGRVSFDQFIRLLEQAGPAGPLEGPDPKVMEFLRILEEYRVKCEEGG 575
MDL ESH GGSGGGINT++G TP MT +GEHQRTSASAGAAAGGMQ QAGGQGVYGREEVSALKGIFNLYDAENTGTIGVKELEGILQKVGHNPDDVARVMAAAANT+AGMDGRVSFDQFIRLLEQAGPAGPLEGPDPKVMEFLRILEEYRVKCEEGG
Sbjct: 1 MDLAATESHRGGSGGGINTDNGGTPA--MTGSGEHQRTSASAGAAAGGMQPQAGGQGVYGREEVSALKGIFNLYDAENTGTIGVKELEGILQKVGHNPDDVARVMAAAANTDAGMDGRVSFDQFIRLLEQAGPAGPLEGPDPKVMEFLRILEEYRVKCEEGG 160
BLAST of mRNA_E-fasciculatus_F_contig1364.2700.1 vs. uniprot
Match: A0A7S2GCP4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCP4_9STRA) HSP 1 Score: 114 bits (285), Expect = 8.010e-27 Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 3
Query: 264 YGREEVSALKGIFNLYDAENTGTIGVKELEGILQKVGHNPDDVARVMAAAANTEAGMDGRVSFDQFIRLLEQAGPAGPLEGPDPKVMEFLRILEEYRVKCEEGG 575
Y +E++AL+GIF LYD E +G+I ELE +L+K+G+ D ++ AA E+ VSFD F+ LLE+ P+ P E PDPKVMEFLRILEEYR+KCEE G
Sbjct: 10 YSADEINALRGIFALYDPEKSGSISAAELESLLEKIGYTGDSKVDILDAAQGMES-----VSFDDFLDLLEKGQPSQPGEAPDPKVMEFLRILEEYRIKCEEEG 108
BLAST of mRNA_E-fasciculatus_F_contig1364.2700.1 vs. uniprot
Match: A0A6V1W3Y9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1W3Y9_HETAK) HSP 1 Score: 114 bits (284), Expect = 1.180e-26 Identity = 59/110 (53.64%), Postives = 76/110 (69.09%), Query Frame = 3
Query: 264 YGREEVSALKGIFNLYDAENTGTIGVKELEGILQKVGHNPDDVARVMAAAANTEAG-MDGRVSFDQFIRLL---EQAGPAGPLE--GPDPKVMEFLRILEEYRVKCEEGG 575
+ REE++AL GIF LYDA+N+G I V+ELE I K+G NPD+ A ++ N G DG++SFD+F+ LL + AG P GPD KV+EFLRILEEYR+KCEE G
Sbjct: 16 FSREEINALHGIFALYDADNSGYIQVEELENIFTKIGKNPDEAAALLQEVDNRAGGERDGQISFDEFVDLLALQKAAGDGDPNSDGGPDQKVLEFLRILEEYRLKCEEEG 125
BLAST of mRNA_E-fasciculatus_F_contig1364.2700.1 vs. uniprot
Match: A0A7S2WV09_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV09_9STRA) HSP 1 Score: 111 bits (278), Expect = 6.890e-26 Identity = 53/104 (50.96%), Postives = 72/104 (69.23%), Query Frame = 3
Query: 264 YGREEVSALKGIFNLYDAENTGTIGVKELEGILQKVGHNPDDVARVMAAAANTEAGMDGRVSFDQFIRLLEQAGPAGPLEGPDPKVMEFLRILEEYRVKCEEGG 575
Y EE+ ALKGIF LYD + TG+I ELE +L+K+G+ D ++AA+ V+F++F++L+E+ P P EGPDPKVMEFLRILEEYR+KCE+ G
Sbjct: 18 YTAEEIHALKGIFALYDPDKTGSIPASELESLLEKIGYTGDSKQDILAASKELS-----NVTFEEFLQLIEKGQPQQPGEGPDPKVMEFLRILEEYRLKCEDEG 116
BLAST of mRNA_E-fasciculatus_F_contig1364.2700.1 vs. uniprot
Match: A0A7S1C3U0_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3U0_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 3.360e-20 Identity = 43/101 (42.57%), Postives = 67/101 (66.34%), Query Frame = 3
Query: 273 EEVSALKGIFNLYDAENTGTIGVKELEGILQKVGHNPDDVARVMAAAANTEAGMDGRVSFDQFIRLLEQAGPAGPLEGPDPKVMEFLRILEEYRVKCEEGG 575
EE++AL+ IF+ +D + G I E+E +++K+G +P D A ++ + + G ++FD+F+ L+ QA A P E DPKV+EFLRIL+EYR+KCE G
Sbjct: 28 EELAALRSIFDQFDTDGGGAISTAEMEAVMEKLGRDPADAAELLR---DVDPDRSGTITFDEFVGLVNQARDAPPGEAADPKVLEFLRILDEYRLKCESEG 125
BLAST of mRNA_E-fasciculatus_F_contig1364.2700.1 vs. uniprot
Match: A0A7S4EBY1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBY1_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 3.070e-19 Identity = 48/104 (46.15%), Postives = 65/104 (62.50%), Query Frame = 3
Query: 264 YGREEVSALKGIFNLYDAENTGTIGVKELEGILQKVGHNPDDVARVMAAAANTEAGMDGRVSFDQFIRLLEQAGPAGPLEGPDPKVMEFLRILEEYRVKCEEGG 575
Y +EE+SAL+GIF LYD + TG I +LE +LQK+G + ++ TE V F +F+ L++ P P E PDPKV+EFLRILE+YR KCE+ G
Sbjct: 38 YSKEEISALRGIFALYDPDGTGEISSADLESLLQKIGLKQEAARELIERFDVTEPTT---VDFAKFLELVKAGQPDQPGEEPDPKVLEFLRILEQYRRKCEKEG 138
BLAST of mRNA_E-fasciculatus_F_contig1364.2700.1 vs. uniprot
Match: A0A7S3HQS7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQS7_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.920e-18 Identity = 43/106 (40.57%), Postives = 64/106 (60.38%), Query Frame = 3
Query: 264 YGREEVSALKGIFNLYDAENTGTIGVKELEGILQKVGHNPDDVARVMAAAANTEAGMDGRVSFDQFIRLLEQAGPAG--PLEGPDPKVMEFLRILEEYRVKCEEGG 575
Y EE+S ++ +F+ D + G I + +L G+L K+G + D++ R+ A+ G + FD + LL+ + P EG DPKV+EFL+ILEEYRVKCEE G
Sbjct: 11 YSAEEISVIRTVFDSCDGDRVGRIHINQLSGLLMKLGKDDDEIVRLTETASKVADDNQGMLQFDDVLYLLQSVEKSYELPFEGSDPKVLEFLQILEEYRVKCEEEG 116
BLAST of mRNA_E-fasciculatus_F_contig1364.2700.1 vs. uniprot
Match: A0A6G0WK11_9STRA (EF-hand domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WK11_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 7.790e-17 Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 3
Query: 264 YGREEVSALKGIFNLYDAENTGTIGVKELEGILQKVGHNPDDVARVMAAAANTEAGMDGRVSFDQFIRLLE-QAGPAGPLE-GPDPKVMEFLRILEEYRVKCEEGG 575
Y EE++AL +F+L+D +G I LE IL K+G NP + ++ T D +SF++F+ L+ Q P GPDPKVMEF+ ILEEYR KCEE G
Sbjct: 11 YSAEEINALSAVFSLFDENGSGRISTVHLESILAKLGRNPSEAQDLL----KTIDLQDDTISFEEFLLLVRSQPDIDAPYNLGPDPKVMEFINILEEYRAKCEEDG 112
BLAST of mRNA_E-fasciculatus_F_contig1364.2700.1 vs. uniprot
Match: A0A1V9ZLF7_9STRA (Transmembrane protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLF7_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 9.410e-17 Identity = 46/107 (42.99%), Postives = 64/107 (59.81%), Query Frame = 3
Query: 264 YGREEVSALKGIFNLYDAENTGTIGVKELEGILQKVGHNPDDVARVMAAAANTEAGMDGR-VSFDQFIRLL-EQAGPAGPLE-GPDPKVMEFLRILEEYRVKCEEGG 575
Y EEVSAL +F+L+D + TG I + LE I K+G P + ++ + G D ++F++F+ L+ +Q P GPDPKVMEF+ ILEEYR KCEE G
Sbjct: 716 YSAEEVSALNAVFSLFDEDGTGRISINHLEAIFAKLGRPPHEAEELLKTV---DLGQDDETIAFEEFLLLVRKQPDIDSPYNVGPDPKVMEFINILEEYRAKCEEDG 819
BLAST of mRNA_E-fasciculatus_F_contig1364.2700.1 vs. uniprot
Match: A0A067CTU6_SAPPC (EF-hand domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CTU6_SAPPC) HSP 1 Score: 86.3 bits (212), Expect = 1.500e-16 Identity = 47/109 (43.12%), Postives = 66/109 (60.55%), Query Frame = 3
Query: 264 YGREEVSALKGIFNLYDAENTGTIGVKELEGILQKVG---HNPDDVARVMAAAANTEAGMDGRVSFDQFIRLL-EQAGPAGPLE-GPDPKVMEFLRILEEYRVKCEEGG 575
Y EEVSAL +F+L+D + G I V+ LE I K+G H DD+ + + + + E ++F++F+ L+ +Q P GPDPKVMEF+ ILEEYR KCEE G
Sbjct: 10 YSAEEVSALSAVFSLFDEDGVGRISVQHLEAIFTKLGRPPHEADDLLKSIDLSQDDET-----ITFEEFLLLVRKQPDIDSPYNVGPDPKVMEFINILEEYRAKCEEDG 113 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1364.2700.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1364.2700.1 >prot_E-fasciculatus_F_contig1364.2700.1 ID=prot_E-fasciculatus_F_contig1364.2700.1|Name=mRNA_E-fasciculatus_F_contig1364.2700.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=162bp MDLTVAESHGGGSGGGINTNDGATPTTPMTETGEHQRTSASAGAAAGGMQback to top mRNA from alignment at E-fasciculatus_F_contig1364:14716..16221+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1364.2700.1 ID=mRNA_E-fasciculatus_F_contig1364.2700.1|Name=mRNA_E-fasciculatus_F_contig1364.2700.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1506bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1364:14716..16221+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1364:14716..16221+ >mRNA_E-fasciculatus_F_contig1364.2700.1 ID=mRNA_E-fasciculatus_F_contig1364.2700.1|Name=mRNA_E-fasciculatus_F_contig1364.2700.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=972bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1364:14716..16221+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |