prot_E-fasciculatus_F_contig13639.2698.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13639.2698.1
Unique Nameprot_E-fasciculatus_F_contig13639.2698.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length287
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13639.2698.1 vs. uniprot
Match: D8LL20_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL20_ECTSI)

HSP 1 Score: 482 bits (1241), Expect = 3.880e-162
Identity = 267/294 (90.82%), Postives = 272/294 (92.52%), Query Frame = 0 
Query:    6 KQVLPIPDGPSVSPPVALAHSHCPGWQRFTIWIAKKDGSVGALCPVVPQTAKVDSEELVGLWSSTCDTLVAARWEQEHQSGADSQQQSALDQEVARLEQQKGWLRETFSHVFDGQDKDG--------GALVARTPRHLVLQDRILAGRAGENAGAACGLAVLQGVGGXXXXXXXXXXXXXXXVVLAVAYREGWVDIALVPEGVSPRWSERAGQRVSCAV----GGGGETSGAVLESLDLAERVEDKTARRRQGLSLSTGGSGSWTLLAATPCRVASITVTWAGRIQRAAERARE 287
            +QVLPIPDGP+VSPPVALAHSHCPGWQRFTIWIAKKDGSVGALCPVVPQTAKVDSEELVGLWS+TCDTLVAARWEQ HQSG DSQQQSALD+EVARLEQQKGWLRETFSHVF GQD DG        GALVARTPRHLVLQDRILAGR GENAGAACGLAVLQGVGGXXXXXXXXXXXXXXXVVLAVAYREGWVDIALVP GVSPRWSERAGQRVSCA     G GGETSGAVLESLDLAERVEDKTARRRQGLSLS GGS SWTLLAATPCRVAS+TVTWAGRIQRAAERARE
Sbjct:  263 EQVLPIPDGPNVSPPVALAHSHCPGWQRFTIWIAKKDGSVGALCPVVPQTAKVDSEELVGLWSATCDTLVAARWEQAHQSGTDSQQQSALDEEVARLEQQKGWLRETFSHVFYGQDNDGTAAAVPAGGALVARTPRHLVLQDRILAGRTGENAGAACGLAVLQGVGGXXXXXXXXXXXXXXXVVLAVAYREGWVDIALVPAGVSPRWSERAGQRVSCAAAAAGGSGGETSGAVLESLDLAERVEDKTARRRQGLSLSAGGSASWTLLAATPCRVASVTVTWAGRIQRAAERARE 556
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13639.2698.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LL20_ECTSI3.880e-16290.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037700Nucleoporin NUP88/NUP82PANTHERPTHR13257NUCLEOPORIN NUP84-RELATEDcoord: 29..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13639contigE-fasciculatus_F_contig13639:1007..3348 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13639.2698.1mRNA_E-fasciculatus_F_contig13639.2698.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13639 1007..3348 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13639.2698.1 ID=prot_E-fasciculatus_F_contig13639.2698.1|Name=mRNA_E-fasciculatus_F_contig13639.2698.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=287bp
MYVCTKQVLPIPDGPSVSPPVALAHSHCPGWQRFTIWIAKKDGSVGALCP
VVPQTAKVDSEELVGLWSSTCDTLVAARWEQEHQSGADSQQQSALDQEVA
RLEQQKGWLRETFSHVFDGQDKDGGALVARTPRHLVLQDRILAGRAGENA
GAACGLAVLQGVGGGAGGDAAEAAAAPPPVVLAVAYREGWVDIALVPEGV
SPRWSERAGQRVSCAVGGGGETSGAVLESLDLAERVEDKTARRRQGLSLS
TGGSGSWTLLAATPCRVASITVTWAGRIQRAAERARE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037700NUP88/NUP82