prot_E-fasciculatus_F_contig13638.2696.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13638.2696.1
Unique Nameprot_E-fasciculatus_F_contig13638.2696.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length115
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13638.2696.1 vs. uniprot
Match: A0A6H5KMH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMH1_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 3.400e-21
Identity = 63/103 (61.17%), Postives = 69/103 (66.99%), Query Frame = 0 
Query:    2 RASGQQQQPNGIIGHEAAGRPASGGSSVSSGVGEWGDSRHEAAGHWSVDHGHHPGHVGVGDGDGPRLLRGSGRGE---FPVGYPFH-EKRMRVSGGERHAHML 100
            RA   QQQP    G + AGRP S GSSVSSG+GEWGDSRH+AAG W VD  HHPG +GV  GDGPRL   + R     FP GYPFH EK MRV GG   AHM+
Sbjct:  181 RAGRHQQQPQHPEGVDLAGRPNSVGSSVSSGMGEWGDSRHDAAGDWPVDQ-HHPGSIGVA-GDGPRLRHTANRDSTRNFPAGYPFHGEKEMRVGGGP--AHMM 279
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13638.2696.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KMH1_9PHAE3.400e-2161.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002328Alcohol dehydrogenase, zinc-type, conserved sitePROSITEPS00059ADH_ZINCcoord: 15..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13638contigE-fasciculatus_F_contig13638:1614..1958 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13638.2696.1mRNA_E-fasciculatus_F_contig13638.2696.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13638 1614..1958 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13638.2696.1 ID=prot_E-fasciculatus_F_contig13638.2696.1|Name=mRNA_E-fasciculatus_F_contig13638.2696.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=115bp
SRASGQQQQPNGIIGHEAAGRPASGGSSVSSGVGEWGDSRHEAAGHWSVD
HGHHPGHVGVGDGDGPRLLRGSGRGEFPVGYPFHEKRMRVSGGERHAHML
RGEEAAAHHELPRHF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002328ADH_Zn_CS