mRNA_E-fasciculatus_F_contig13633.2694.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13633.2694.1 vs. uniprot
Match: D8LI20_ECTSI (TKL family protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI20_ECTSI) HSP 1 Score: 368 bits (944), Expect = 9.140e-113 Identity = 295/472 (62.50%), Postives = 303/472 (64.19%), Query Frame = 1
Query: 412 RQRSCGGVPVXXXXXXXXXXXXAVS------WAEVEALALTSIVPAVREAADSVACLMKASSGXXXXG-EWVGWCGSVARTLRRAVRVLAKATAHDEQVERVLMEDIQESICEMSEIMQSYASRGLSAEEAFWSGLCHRRQSEAELAIALASQRLELVMKVRAGYGSSSTSRSSSNSLLEVSDRHSRMQRRSSQEILEDSKTRLREWRLHHVEIPATEVEVVGDEVLGDGXXXXXXXXXXXXXXXXGDFGAAVSTTVYLGSCVGLNAAIKVFSFKGGGXXXXXXGELGSPGRSSIEHRLRCRQREAALVREVESLQRLRGPHIVTIFGVVVSGAIDGGSGDSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMPLNDRALRGIVGDVCSGMAHLADLGFVHGGLSSSNVLLDAGGRAKV 1806
RQRS GGVP+XXXXXXXXXXXX WAEVEALALTSIVPAVREAADSVA LMKAS GXXXX WVGWCGSVARTLRRAVRVLAKATAHDEQVERVLMEDIQESICEMSEIMQ YASRGLSAEEAFWSGLCHRRQSEAELAIALASQRLELVMKVRAGY S SS+SLLE SDRHSRMQRRSSQEILEDSKTRLREWRLH VEIPATEVEVVGDEVLGDGXXXXXXXXXXXX + + VSTTVYLGSC+GLNAA+K FSFKGG XXXXXXXXXXXXXXXXX L+DRALR IVGDVCSGMAHLADLGFVHGGLSSSNVLLDA GRAK+
Sbjct: 236 RQRSSGGVPLXXXXXXXXXXXXXXXXXXXXXWAEVEALALTSIVPAVREAADSVARLMKASGGXXXXXXNWVGWCGSVARTLRRAVRVLAKATAHDEQVERVLMEDIQESICEMSEIMQCYASRGLSAEEAFWSGLCHRRQSEAELAIALASQRLELVMKVRAGYSGGS----SSSSLLEASDRHSRMQRRSSQEILEDSKTRLREWRLHQVEIPATEVEVVGDEVLGDGXXXXXXXXXXXXSEDKRN--STVSTTVYLGSCMGLNAAVKAFSFKGG---------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXLDDRALRRIVGDVCSGMAHLADLGFVHGGLSSSNVLLDARGRAKI 572
BLAST of mRNA_E-fasciculatus_F_contig13633.2694.1 vs. uniprot
Match: D8LTP4_ECTSI (Putative Leucine Rich Repeat Protein Kinase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP4_ECTSI) HSP 1 Score: 130 bits (327), Expect = 6.580e-28 Identity = 116/305 (38.03%), Postives = 159/305 (52.13%), Query Frame = 1
Query: 490 AEVEALALTSIVPAVREAADSVACLMKASSGXXXXG----EWVGWCGSVARTLRRAVRVLAKATAH--DEQVERVLMEDIQESICEMSEIMQSYASRGLSAEEAFWSGLCHRRQSEAELAIALASQRLELVMKVRAGYGSSSTSRSSSNSLLEVSDRHSRMQRRSSQEILEDSKTRLREWRLHHVEIPATEVEVVGDEVLGDGXXXXXXXXXXXXXXXXGDFGAAVSTTVYLGSCVGLNAAIKVFSFKGGGXXXXXXGELGSPGRSSIEHRLRCRQREAALVREVESLQRLRGPHIVTIFGVVVS 1386
A EALA S P VREAA VA L++ +S G + WC S+ TL RA VLAK A D+Q RVL++D+Q+SI ++ +I++SY S+ + + F S LC +RQ EAE+AI A QRL+L ++VR G +S + L + +R+S+E SK + R+ R+ +EIPA++VEV +EVLG G FG TVYL GLNAA KV S EH+ RQR +RE+E+++RLRGPH VTI+G V S
Sbjct: 425 ASAEALAQQSFFPGVREAASVVAGLVRLASDHKSNGRESEKRARWCRSIVHTLERAGEVLAKVKAGRGDDQAVRVLLDDVQDSIADLLQIIESYKSKN-ALSKVFVSSLCKKRQEEAEVAINAAVQRLQLGLQVRVGQDLASVGEAVQEGL--------NLHQRASEESGMVSKKKRRQHRMDQLEIPASDVEVT-NEVLG-----------------RGGFG-----TVYLADLHGLNAAAKVVS---------------------REHQ---RQRRM-FMRELEAMKRLRGPHTVTIYGAVTS 672
BLAST of mRNA_E-fasciculatus_F_contig13633.2694.1 vs. uniprot
Match: D8LTP7_ECTSI (Two component regulator three Y domain protein/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP7_ECTSI) HSP 1 Score: 127 bits (320), Expect = 4.770e-27 Identity = 119/306 (38.89%), Postives = 158/306 (51.63%), Query Frame = 1
Query: 490 AEVEALALTSIVPAVREAADSVACLMKASSGXXXXGEW----VGWCGSVARTLRRAVRVL---AKATAHDEQVERVLMEDIQESICEMSEIMQSYASRGLSAEEAFWSGLCHRRQSEAELAIALASQRLELVMKVRAGYGSSSTSRSSSNSLLEVSDRHSRMQRRSSQEILEDSKTRLREWRLHHVEIPATEVEVVGDEVLGDGXXXXXXXXXXXXXXXXGDFGAAVSTTVYLGSCVGLNAAIKVFSFKGGGXXXXXXGELGSPGRSSIEHRLRCRQREAALVREVESLQRLRGPHIVTIFGVVVS 1386
A EALA S P VREAA VA L+ +S G+ WC S+ TL RA VL AKA D Q VL++D+Q+SI ++ +I++SY S+ + + F S LC +RQ EAE+AI A QRL+L ++VR G +S + + E D H RR+SQE +K + R+ RL +EIPA++VEV +EVLG G FG TVYL GLNAA KV S EH+ RQR +RE+E+++RLRGPH VTI+G V S
Sbjct: 413 AGAEALAQQSFFPGVREAASVVAGLVGLASDHKNNGKESEKRARWCRSIVHTLERAAEVLGKEAKAGKGDSQAVHVLLDDVQDSIADLLQIIESYKSKN-ALSKVFVSTLCKKRQEEAEVAINAAVQRLQLGLQVRVGQNLASVGEA----VQEGLDLH----RRASQESEMVTKKKRRQHRLDQLEIPASDVEVT-NEVLG-----------------RGGFG-----TVYLADLHGLNAAAKVVS---------------------REHQ---RQRRM-FMRELEAMKRLRGPHTVTIYGAVTS 661
BLAST of mRNA_E-fasciculatus_F_contig13633.2694.1 vs. uniprot
Match: A0A6H5JVI4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI4_9PHAE) HSP 1 Score: 109 bits (272), Expect = 4.760e-21 Identity = 147/505 (29.11%), Postives = 190/505 (37.62%), Query Frame = 1
Query: 490 AEVEALALTSIVPAVREAADSVACLMKASSGXXXXGEW----VGWCGSVARTLRRAVRVLAKATAH-----DEQVERVLMEDIQESICEMSEIMQSYASRGLSAEEAFWSGLCHRRQSEAELAIALASQRLELVMKVRAGYGSSSTSRSSSNSLLEVSDRHSRMQRRSSQEILEDSKTRLREWRLHHVEIPATEVEVVGDEVLGDGXXXXXXXXXXXXXXXXGDFGAAVSTTVYLGSCVGLNAAIKVFSFKGG------------------GXXXXXXGELGSPG---------------------------------------RSSIEHRLRCRQREAALVREVESLQRLRGPHIVTIFGVVVSGAIDGGSGDSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMPLNDRALRGIVGDVCSGMAHLADLGFVHGGLSSSNVLLDAGGRAKV 1806
A EALA S P VREAA VA L+ +S G+ WC S+ TL RA VL KA D Q VL++D+Q+SI ++ +I++SY S+ S + F S LC +RQ EAE+AI A QRL+L ++V G +S + + E + H R R S + + K R R+ RL +EIPA++VEV +EVLG G FG TVYL GLNAA KV F+ G G L G R S + RQR +RE+E+++RLRG H VTI+G V S A PL ++ LR IV DVC GMA L VHG L S+NVL DA GRAK+
Sbjct: 550 AGAEALAEQSFFPGVREAASVVAGLVGLASDHKNNGKESEKRARWCRSIVHTLERAAEVLGKAREAKGGKGDSQAVHVLLDDVQDSIADLLQIIESYKSKN-SLSKVFVSTLCKKRQEEAEVAINAAVQRLQLGLQVHVGQNLASVGEA----VQEGINFHRRASRASWESEMVTKKKR-RQHRLDQLEIPASDVEVT-NEVLG-----------------RGGFG-----TVYLADLHGLNAAAKVVVFEXXXXXXXEYDCTDCVSNGTDGVLDGGHGVLDCTGDGESXXXXXXXXXXXXXXXXXXXTESTTMPTDSQQQRLSRVSQQXXXXXRQRRM-FMRELEAMKRLRGLHTVTIYGAVTS--------------------------------------------------------------------LPDRLVLVMELLQGGDLRHRLKKAKEPLEEKVLRKIVRDVCCGMAFLHAKATVHGDLKSANVLFDATGRAKI 956
BLAST of mRNA_E-fasciculatus_F_contig13633.2694.1 vs. uniprot
Match: A0A6H5KPB8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPB8_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 1.270e-15 Identity = 45/49 (91.84%), Postives = 47/49 (95.92%), Query Frame = 1
Query: 1660 ALMPLNDRALRGIVGDVCSGMAHLADLGFVHGGLSSSNVLLDAGGRAKV 1806
A MPL+DRALR IVGDVCSGMAHLADLGFVHGGLSSSNVLLDAGGRAK+
Sbjct: 46 APMPLDDRALRRIVGDVCSGMAHLADLGFVHGGLSSSNVLLDAGGRAKI 94
BLAST of mRNA_E-fasciculatus_F_contig13633.2694.1 vs. uniprot
Match: A0A6H5K0B7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0B7_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 7.470e-7 Identity = 70/210 (33.33%), Postives = 101/210 (48.10%), Query Frame = 1
Query: 610 WCGSVARTLRRAVRVLAKATAH---DEQVERVLMEDIQESICEMSEIMQSYASRGLSAEEAFWSGLCHRRQSEAELAIALASQRLELVMKVRAGYGSSSTSRSSSNSL-LEVSDRHSRMQRRSS--------QEILEDSKTRLREWRLHHVEIPATEVEVVGDEVLGDGXXXXXXXXXXXXXXXXGDFGAAVSTTVYLGSCVGLNAAIKV 1203
WC S+ TL RA VL K D Q RVL++D+Q+SI ++ +I++SY S+ + E F S LC +RQ EAE+A+ A Q V A + + ++ N+ LE+ R S+ +R S QE SK + + R+ ++I A++VE +EVLG G FG TVYL GLN KV
Sbjct: 137 WCRSIVHTLERAGEVLGKKVKTGRGDGQAVRVLLDDVQDSIADLLQIIESYKSKN-ALSEVFVSSLCKKRQEEAEVAMKTAVQSFHS-SSVEAHESLPNVAAATLNTAGLELHQRASKARRLSHNASPASCLQESAMMSKKKRGQHRMDQLQISASDVEGT-NEVLG-----------------RGGFG-----TVYLADLHGLNTVAKV 321
BLAST of mRNA_E-fasciculatus_F_contig13633.2694.1 vs. uniprot
Match: A0A6H5KMK6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK6_9PHAE) HSP 1 Score: 56.6 bits (135), Expect = 4.880e-6 Identity = 50/88 (56.82%), Postives = 54/88 (61.36%), Query Frame = 1
Query: 952 MQRRSSQEILEDSKTRLREWRLHHVEIPATEVEVVGDEVLGDGXXXXXXXXXXXXXXXXGDFGAAVSTTVYLGSCVGLNAAIKVFSFK 1215
MQRRSSQEILEDSKTRLREWR XXXXXXXXXXX + VSTTVYLGSC+GLNAA+K F F+
Sbjct: 1 MQRRSSQEILEDSKTRLREWRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRN------STVSTTVYLGSCMGLNAAVKAFYFE 82 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13633.2694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13633.2694.1 >prot_E-fasciculatus_F_contig13633.2694.1 ID=prot_E-fasciculatus_F_contig13633.2694.1|Name=mRNA_E-fasciculatus_F_contig13633.2694.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=608bp FLQGGSVQDSCSVNSGCFDQGSISGWGGGSVCASSSAASAGTGRRARGNSback to top mRNA from alignment at E-fasciculatus_F_contig13633:563..3581- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13633.2694.1 ID=mRNA_E-fasciculatus_F_contig13633.2694.1|Name=mRNA_E-fasciculatus_F_contig13633.2694.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3019bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13633:563..3581- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13633:563..3581- >mRNA_E-fasciculatus_F_contig13633.2694.1 ID=mRNA_E-fasciculatus_F_contig13633.2694.1|Name=mRNA_E-fasciculatus_F_contig13633.2694.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3648bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13633:563..3581- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |