prot_E-fasciculatus_F_contig13609.2683.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13609.2683.1
Unique Nameprot_E-fasciculatus_F_contig13609.2683.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length152
Homology
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: D7FI85_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI85_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 6.360e-89
Identity = 134/142 (94.37%), Postives = 138/142 (97.18%), Query Frame = 0
Query:    1 QGLVERTRAHPRFAKAYRFNTDATWVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEKLMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKV 142
            QGLVERTRAHP+FAK Y F TDATWV+ASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEKLMDTLVRPGNPVVDWRTDIHGV PEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDL+ALK+
Sbjct:  571 QGLVERTRAHPKFAKNYSFETDATWVTASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEKLMDTLVRPGNPVVDWRTDIHGVAPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLSALKM 712          
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: A0A4D9CRL8_9STRA (C3H1-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRL8_9STRA)

HSP 1 Score: 157 bits (396), Expect = 6.310e-42
Identity = 79/148 (53.38%), Postives = 99/148 (66.89%), Query Frame = 0
Query:    2 GLVERTRAHPRFAKAYRF-----NTDATWVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEK-LMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKVK 143
            G V+ T  H RF   YR        +A W+ A   G  C  LP V+ALDCEMC + DP+S E++GK L+RLS+V G D ++ L+DTLV P  PV+D+RTDIHG+ PE L  VMFT RHAQ A+  +CC  TV+IGH L NDLTALK+K
Sbjct:  319 GCVKATMEHARFEANYRALAAQKKGEADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMK 466          
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: B5Y560_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y560_PHATC)

HSP 1 Score: 154 bits (390), Expect = 1.930e-41
Identity = 72/163 (44.17%), Postives = 107/163 (65.64%), Query Frame = 0
Query:    4 VERTRAHPRFAKAYRF------------NTDATWVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEKLMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKVK--CGSEGVPMF 152
            +++ R H ++A AY F            +  +TW+ A P G+ C G PQ IA+DCEMC +EDP+S + N K+L R+SIV  E+ E L+D+LV+P  PVVD+R+ I+G+T EHL+GV FT RH Q  +  +C   TVI+GHAL+NDL A++++  C ++   +F
Sbjct:  241 IQQARQHHKYATAYDFVKYKALDAEIGLDPSSTWIQAKPYGEWCKGFPQAIAIDCEMCETEDPVSGKHNAKDLCRVSIVNAENDEVLLDSLVKPSWPVVDYRSRINGITEEHLKGVQFTLRHTQAFLMALCSQETVILGHALHNDLAAMRMEHYCNADSANLF 403          
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: A0A7R9Y9T2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9T2_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.400e-38
Identity = 72/140 (51.43%), Postives = 96/140 (68.57%), Query Frame = 0
Query:    3 LVERTRAHPRFAKAYRFNTDATWVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEK-LMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALK 141
            L ++   H +F   + F+TD++WV     GD C  LPQ IA+DCEMC  +DP++ E + K L R S+V GE G+  L+DTLV+P  PV D+RTDIHG+T E LEGV FT RHAQ A+  IC   T+IIGHA++NDL +L+
Sbjct:  389 LRKKCSRHRKFETLFSFDTDSSWVRPREYGDWCKDLPQYIAIDCEMCGGKDPVTGEIDAKVLCRFSVVSGEGGKDVLIDTLVQPHMPVQDYRTDIHGITKEQLEGVPFTLRHAQAAMRSICSSKTIIIGHAVHNDLVSLR 528          
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: A0A7S3URN3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URN3_HETAK)

HSP 1 Score: 137 bits (346), Expect = 4.610e-36
Identity = 72/145 (49.66%), Postives = 96/145 (66.21%), Query Frame = 0
Query:    2 GLVERTRAHPRFAKAYRFN-TDATWVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDG--EKLMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKVK 143
            GL E TR HP++A  + F   D +WVS      S PG   V+ALDCEMC SEDP+SK +N KEL+R+S+VRG  G  + ++D+LVRP N V D R  I+G+ P  L GV FT RHAQ A+  +    T+++GHAL+NDL AL+ +
Sbjct:  258 GLAELTRRHPKYAALFAFEGADGSWVSPPA---SLPGAAAVLALDCEMCESEDPVSKAKNEKELVRVSVVRGAAGAADVVLDSLVRPLNTVTDHRERINGIGPAQLAGVQFTLRHAQAALLHLVDSKTLLVGHALHNDLEALRFR 399          
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: A0A1E7FWM9_9STRA (C3H1-type domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWM9_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.000e-35
Identity = 72/154 (46.75%), Postives = 95/154 (61.69%), Query Frame = 0
Query:    1 QGLVERTRAHPRFAKAYRFNT----------DATWVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEK-LMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKVK 143
            Q  V  +R H R+  ++ FN            ++W+ A   G  C   PQ IA+DCEMC S+DPLS  +N K L RLS+V  E  E+ L+DTLV+P  PV D+RT I+GVT EHL+ V FT RHAQ  +  +C   TVI+GHAL+NDL AL ++
Sbjct:  252 QNAVIESRKHARYNNSFDFNRYQENDAKNGIQSSWIKAKAYGSWCASNPQAIAIDCEMCESQDPLSGAKNAKALCRLSVVNAEKPEEVLLDTLVKPSWPVTDYRTRINGVTKEHLDPVEFTLRHAQAFMMALCNEETVIVGHALHNDLVALNME 405          
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: A0A448Z8R7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8R7_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.120e-35
Identity = 68/154 (44.16%), Postives = 98/154 (63.64%), Query Frame = 0
Query:    1 QGLVERTRAHPRFAKAYRF----------NTDATWVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEK-LMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKVK 143
            Q  +  TR H R+  ++ F          N +ATW  A P G  C   PQ IA+DCEMC ++DPL+  +N K L R+S+V  E+ E+ L+DTLV+P  PV D+R+ I+G+  EHL+ V FT RHAQ  + ++C   TVI+GHA++NDL +LK++
Sbjct:  217 QKSIIETRKHDRYDNSHNFDRYKELDAENNIEATWFKAKPYGPWCESNPQAIAIDCEMCETQDPLTGGKNSKALCRISVVNAENPEEVLLDTLVKPAWPVTDYRSRINGIKKEHLDXVEFTLRHAQAFMLKLCSQETVIVGHAVSNDLVSLKME 370          
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: A0A7S4EFC5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EFC5_9STRA)

HSP 1 Score: 136 bits (343), Expect = 8.700e-35
Identity = 70/154 (45.45%), Postives = 96/154 (62.34%), Query Frame = 0
Query:    1 QGLVERTRAHPRFAKAYRF----------NTDATWVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEK-LMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKVK 143
            Q  V  +R H R++ A+ F             ATW+ A P G  C   PQ IA+DCEMC S+DPLS  +N K L R+S+V  E  E+ L+DTLV+P  PV D+RT I+G+  E+L+ V FT RHAQ  + ++C   T+I+GHA+ NDL ALK++
Sbjct:  230 QKPVIESRKHERYSGAHDFARHKKLDTENGIGATWIKAKPYGSWCKSNPQAIAIDCEMCESQDPLSGAKNSKALCRISVVNAEKPEEVLLDTLVKPAWPVTDYRTRINGIKKENLDNVEFTLRHAQAFMLKLCSEETIIVGHAIVNDLVALKME 383          
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: A0A836CAS9_9STRA (Ribonuclease H-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAS9_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.440e-34
Identity = 65/115 (56.52%), Postives = 81/115 (70.43%), Query Frame = 0
Query:   27 SASPCGDS-CPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEKLMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTAL 140
            +AS C  + C  LPQV+ALDCEMC + D  +  R+GK L+R+SIV G  G  L+DTLV P   VVD RT  HG+TPEHL    FT  HAQ A++R+CCP TV++GHAL+NDL AL
Sbjct:   13 AASECKKARCSALPQVLALDCEMCETVDDATGARDGKALVRMSIVDGA-GTPLLDTLVAPRGRVVDMRTSCHGITPEHLRDCRFTLAHAQAAVARLCCPGTVLVGHALHNDLQAL 126          
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: A0A7S2KAR6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KAR6_9STRA)

HSP 1 Score: 134 bits (336), Expect = 8.600e-34
Identity = 68/146 (46.58%), Postives = 94/146 (64.38%), Query Frame = 0
Query:    3 LVERTRAHPRFAKAYRFNTDAT----WVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGED-GEKLMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKVK 143
            LV+ TR+HPR+  +YRF+  A     WV A   G  C   PQ IA+DCEMC ++ P +   N   L RLS++ G++  E L+DTLV+P  PV D+R+ I+G+  EHL  V FT +HAQ  +  +C   TVIIGHA++NDL ALK++
Sbjct:  249 LVQLTRSHPRYESSYRFSQTAEESDGWVRAKAFGSWCAAFPQSIAIDCEMCATKCPQTNTVNNSALCRLSVINGDNPSEVLIDTLVKPDWPVSDYRSRINGIKEEHLAEVQFTLKHAQEFMQALCSNETVIIGHAVHNDLEALKME 394          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI85_ECTSI6.360e-8994.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9CRL8_9STRA6.310e-4253.38C3H1-type domain-containing protein n=2 Tax=Monodo... [more]
B5Y560_PHATC1.930e-4144.17Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7R9Y9T2_9STRA1.400e-3851.43Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3URN3_HETAK4.610e-3649.66Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1E7FWM9_9STRA2.000e-3546.75C3H1-type domain-containing protein n=1 Tax=Fragil... [more]
A0A448Z8R7_9STRA2.120e-3544.16Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4EFC5_9STRA8.700e-3545.45Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A836CAS9_9STRA2.440e-3456.52Ribonuclease H-like domain-containing protein n=1 ... [more]
A0A7S2KAR6_9STRA8.600e-3446.58Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 42..131
e-value: 3.0E-4
score: 21.4
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 38..150
e-value: 5.8E-25
score: 89.8
NoneNo IPR availablePANTHERPTHR12801:SF132SMALL RNA DEGRADING NUCLEASE 1-RELATEDcoord: 1..142
NoneNo IPR availablePANTHERPTHR12801EXONUCLEASEcoord: 1..142
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 41..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13609contigE-fasciculatus_F_contig13609:153..1733 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13609.2683.1mRNA_E-fasciculatus_F_contig13609.2683.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13609 153..1733 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13609.2683.1 ID=prot_E-fasciculatus_F_contig13609.2683.1|Name=mRNA_E-fasciculatus_F_contig13609.2683.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=152bp
QGLVERTRAHPRFAKAYRFNTDATWVSASPCGDSCPGLPQVIALDCEMCM
SEDPLSKERNGKELLRLSIVRGEDGEKLMDTLVRPGNPVVDWRTDIHGVT
PEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKVKCGSEGVP
MF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR036397RNaseH_sf
IPR013520Exonuclease_RNaseT/DNA_pol3