mRNA_E-fasciculatus_F_contig13609.2683.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: D7FI85_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI85_ECTSI) HSP 1 Score: 287 bits (734), Expect = 6.360e-89 Identity = 134/142 (94.37%), Postives = 138/142 (97.18%), Query Frame = 1
Query: 1 QGLVERTRAHPRFAKAYRFNTDATWVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEKLMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKV 426
QGLVERTRAHP+FAK Y F TDATWV+ASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEKLMDTLVRPGNPVVDWRTDIHGV PEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDL+ALK+
Sbjct: 571 QGLVERTRAHPKFAKNYSFETDATWVTASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEKLMDTLVRPGNPVVDWRTDIHGVAPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLSALKM 712
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: A0A4D9CRL8_9STRA (C3H1-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRL8_9STRA) HSP 1 Score: 157 bits (396), Expect = 6.310e-42 Identity = 79/148 (53.38%), Postives = 99/148 (66.89%), Query Frame = 1
Query: 4 GLVERTRAHPRFAKAYRF-----NTDATWVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEK-LMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKVK 429
G V+ T H RF YR +A W+ A G C LP V+ALDCEMC + DP+S E++GK L+RLS+V G D ++ L+DTLV P PV+D+RTDIHG+ PE L VMFT RHAQ A+ +CC TV+IGH L NDLTALK+K
Sbjct: 319 GCVKATMEHARFEANYRALAAQKKGEADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMK 466
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: B5Y560_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y560_PHATC) HSP 1 Score: 154 bits (390), Expect = 1.930e-41 Identity = 72/163 (44.17%), Postives = 107/163 (65.64%), Query Frame = 1
Query: 10 VERTRAHPRFAKAYRF------------NTDATWVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEKLMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKVK--CGSEGVPMF 456
+++ R H ++A AY F + +TW+ A P G+ C G PQ IA+DCEMC +EDP+S + N K+L R+SIV E+ E L+D+LV+P PVVD+R+ I+G+T EHL+GV FT RH Q + +C TVI+GHAL+NDL A++++ C ++ +F
Sbjct: 241 IQQARQHHKYATAYDFVKYKALDAEIGLDPSSTWIQAKPYGEWCKGFPQAIAIDCEMCETEDPVSGKHNAKDLCRVSIVNAENDEVLLDSLVKPSWPVVDYRSRINGITEEHLKGVQFTLRHTQAFLMALCSQETVILGHALHNDLAAMRMEHYCNADSANLF 403
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: A0A7R9Y9T2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9T2_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.400e-38 Identity = 72/140 (51.43%), Postives = 96/140 (68.57%), Query Frame = 1
Query: 7 LVERTRAHPRFAKAYRFNTDATWVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEK-LMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALK 423
L ++ H +F + F+TD++WV GD C LPQ IA+DCEMC +DP++ E + K L R S+V GE G+ L+DTLV+P PV D+RTDIHG+T E LEGV FT RHAQ A+ IC T+IIGHA++NDL +L+
Sbjct: 389 LRKKCSRHRKFETLFSFDTDSSWVRPREYGDWCKDLPQYIAIDCEMCGGKDPVTGEIDAKVLCRFSVVSGEGGKDVLIDTLVQPHMPVQDYRTDIHGITKEQLEGVPFTLRHAQAAMRSICSSKTIIIGHAVHNDLVSLR 528
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: A0A7S3URN3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URN3_HETAK) HSP 1 Score: 137 bits (346), Expect = 4.610e-36 Identity = 72/145 (49.66%), Postives = 96/145 (66.21%), Query Frame = 1
Query: 4 GLVERTRAHPRFAKAYRFN-TDATWVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDG--EKLMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKVK 429
GL E TR HP++A + F D +WVS S PG V+ALDCEMC SEDP+SK +N KEL+R+S+VRG G + ++D+LVRP N V D R I+G+ P L GV FT RHAQ A+ + T+++GHAL+NDL AL+ +
Sbjct: 258 GLAELTRRHPKYAALFAFEGADGSWVSPPA---SLPGAAAVLALDCEMCESEDPVSKAKNEKELVRVSVVRGAAGAADVVLDSLVRPLNTVTDHRERINGIGPAQLAGVQFTLRHAQAALLHLVDSKTLLVGHALHNDLEALRFR 399
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: A0A1E7FWM9_9STRA (C3H1-type domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWM9_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.000e-35 Identity = 72/154 (46.75%), Postives = 95/154 (61.69%), Query Frame = 1
Query: 1 QGLVERTRAHPRFAKAYRFNT----------DATWVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEK-LMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKVK 429
Q V +R H R+ ++ FN ++W+ A G C PQ IA+DCEMC S+DPLS +N K L RLS+V E E+ L+DTLV+P PV D+RT I+GVT EHL+ V FT RHAQ + +C TVI+GHAL+NDL AL ++
Sbjct: 252 QNAVIESRKHARYNNSFDFNRYQENDAKNGIQSSWIKAKAYGSWCASNPQAIAIDCEMCESQDPLSGAKNAKALCRLSVVNAEKPEEVLLDTLVKPSWPVTDYRTRINGVTKEHLDPVEFTLRHAQAFMMALCNEETVIVGHALHNDLVALNME 405
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: A0A448Z8R7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8R7_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.120e-35 Identity = 68/154 (44.16%), Postives = 98/154 (63.64%), Query Frame = 1
Query: 1 QGLVERTRAHPRFAKAYRF----------NTDATWVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEK-LMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKVK 429
Q + TR H R+ ++ F N +ATW A P G C PQ IA+DCEMC ++DPL+ +N K L R+S+V E+ E+ L+DTLV+P PV D+R+ I+G+ EHL+ V FT RHAQ + ++C TVI+GHA++NDL +LK++
Sbjct: 217 QKSIIETRKHDRYDNSHNFDRYKELDAENNIEATWFKAKPYGPWCESNPQAIAIDCEMCETQDPLTGGKNSKALCRISVVNAENPEEVLLDTLVKPAWPVTDYRSRINGIKKEHLDXVEFTLRHAQAFMLKLCSQETVIVGHAVSNDLVSLKME 370
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: A0A7S4EFC5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EFC5_9STRA) HSP 1 Score: 136 bits (343), Expect = 8.700e-35 Identity = 70/154 (45.45%), Postives = 96/154 (62.34%), Query Frame = 1
Query: 1 QGLVERTRAHPRFAKAYRF----------NTDATWVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEK-LMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKVK 429
Q V +R H R++ A+ F ATW+ A P G C PQ IA+DCEMC S+DPLS +N K L R+S+V E E+ L+DTLV+P PV D+RT I+G+ E+L+ V FT RHAQ + ++C T+I+GHA+ NDL ALK++
Sbjct: 230 QKPVIESRKHERYSGAHDFARHKKLDTENGIGATWIKAKPYGSWCKSNPQAIAIDCEMCESQDPLSGAKNSKALCRISVVNAEKPEEVLLDTLVKPAWPVTDYRTRINGIKKENLDNVEFTLRHAQAFMLKLCSEETIIVGHAIVNDLVALKME 383
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: A0A836CAS9_9STRA (Ribonuclease H-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAS9_9STRA) HSP 1 Score: 129 bits (324), Expect = 2.440e-34 Identity = 65/115 (56.52%), Postives = 81/115 (70.43%), Query Frame = 1
Query: 79 SASPCGDS-CPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEKLMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTAL 420
+AS C + C LPQV+ALDCEMC + D + R+GK L+R+SIV G G L+DTLV P VVD RT HG+TPEHL FT HAQ A++R+CCP TV++GHAL+NDL AL
Sbjct: 13 AASECKKARCSALPQVLALDCEMCETVDDATGARDGKALVRMSIVDGA-GTPLLDTLVAPRGRVVDMRTSCHGITPEHLRDCRFTLAHAQAAVARLCCPGTVLVGHALHNDLQAL 126
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Match: A0A7S2KAR6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KAR6_9STRA) HSP 1 Score: 134 bits (336), Expect = 8.600e-34 Identity = 68/146 (46.58%), Postives = 94/146 (64.38%), Query Frame = 1
Query: 7 LVERTRAHPRFAKAYRFNTDAT----WVSASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGED-GEKLMDTLVRPGNPVVDWRTDIHGVTPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLTALKVK 429
LV+ TR+HPR+ +YRF+ A WV A G C PQ IA+DCEMC ++ P + N L RLS++ G++ E L+DTLV+P PV D+R+ I+G+ EHL V FT +HAQ + +C TVIIGHA++NDL ALK++
Sbjct: 249 LVQLTRSHPRYESSYRFSQTAEESDGWVRAKAFGSWCAAFPQSIAIDCEMCATKCPQTNTVNNSALCRLSVINGDNPSEVLIDTLVKPDWPVSDYRSRINGIKEEHLAEVQFTLKHAQEFMQALCSNETVIIGHAVHNDLEALKME 394 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13609.2683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13609.2683.1 >prot_E-fasciculatus_F_contig13609.2683.1 ID=prot_E-fasciculatus_F_contig13609.2683.1|Name=mRNA_E-fasciculatus_F_contig13609.2683.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=152bp QGLVERTRAHPRFAKAYRFNTDATWVSASPCGDSCPGLPQVIALDCEMCMback to top mRNA from alignment at E-fasciculatus_F_contig13609:153..1733- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13609.2683.1 ID=mRNA_E-fasciculatus_F_contig13609.2683.1|Name=mRNA_E-fasciculatus_F_contig13609.2683.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1581bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13609:153..1733- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13609:153..1733- >mRNA_E-fasciculatus_F_contig13609.2683.1 ID=mRNA_E-fasciculatus_F_contig13609.2683.1|Name=mRNA_E-fasciculatus_F_contig13609.2683.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=912bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13609:153..1733- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |