prot_E-fasciculatus_F_contig1360.2681.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1360.2681.1
Unique Nameprot_E-fasciculatus_F_contig1360.2681.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length269
Homology
BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: D8LBJ3_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBJ3_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 2.320e-94
Identity = 210/228 (92.11%), Postives = 210/228 (92.11%), Query Frame = 0
Query:   16 MGVGASHQTKLEREFGDIGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMADSVAARRKLREEAATVQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRSSTWSKMSSFKGSFGNGL 243
            MGVGASHQTKLEREFGDIGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREED SGG  XXXXXXXXXXXXXX    KTVLSELAELFSSIS QKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMADSV ARRKLREEAATVQE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       PRRSSTWSKMSSFKGSFGNGL
Sbjct:    1 MGVGASHQTKLEREFGDIGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDTSGGXXXXXXXXXXXXXXXXSG--KTVLSELAELFSSISNQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMADSVVARRKLREEAATVQEHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------PRRSSTWSKMSSFKGSFGNGL 219          
BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: A0A835Z200_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z200_9STRA)

HSP 1 Score: 141 bits (355), Expect = 4.280e-36
Identity = 76/155 (49.03%), Postives = 100/155 (64.52%), Query Frame = 0
Query:   16 MGVGASHQTKLEREFGDIGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSG-----GSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMADSV 165
            MG G+S  +KLE++ G     +  ER++GLENFGNTCYCNSV+QALYFC PLR  L     ++ S      GSS                   ++L +LAELF+ I+  KR SG +AP  F++TLRE NELFRGN QQDAHEF+NF++N+MAD++
Sbjct:    1 MGTGSSSPSKLEQDLGYTEPVEAGERYYGLENFGNTCYCNSVMQALYFCGPLRTELLARHTQNSSATVMATGSSQYPAG--------------SLLYQLAELFAVITNTKRLSGRVAPQAFMQTLRETNELFRGNMQQDAHEFYNFIINDMADTL 141          
BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: A0A5A7QT99_STRAF (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Orobanchaceae TaxID=91896 RepID=A0A5A7QT99_STRAF)

HSP 1 Score: 127 bits (319), Expect = 8.440e-31
Identity = 71/150 (47.33%), Postives = 91/150 (60.67%), Query Frame = 0
Query:   15 VMGVGASHQTKLEREFGD-IGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMAD 163
             MGV  S   KLE+  GD   +G   ER+FGLENFGNTCYCNSVLQALYFC P R HL +    + + G +                  + +L+ LAELFS IS QK+++G +AP  F++ +R  NE FRG   QDAHEF N++LNE+ D
Sbjct:    8 AMGVAGS---KLEKALGDQFPEG---ERYFGLENFGNTCYCNSVLQALYFCAPFREHLLEYYSNNKNQGEAD-----------------ENILTCLAELFSQISSQKKKTGVIAPKRFVQRIRRENENFRGYMHQDAHEFLNYLLNELVD 134          
BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: UPI000C1CFA10 (ubiquitin carboxyl-terminal hydrolase 3-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CFA10)

HSP 1 Score: 126 bits (316), Expect = 2.290e-30
Identity = 72/150 (48.00%), Postives = 92/150 (61.33%), Query Frame = 0
Query:   15 VMGVGASHQTKLEREFGD-IGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMAD 163
             MGV  S   KLE+  GD   +G   ER+FGLENFGNTCYCNSVLQALYFC P R  L +    + +                      + +L+ LAELFS IS QK+++G +AP  F++ +R++NELFRG   QDAHEF NF+LNE+AD
Sbjct:    8 TMGVAGS---KLEKALGDHFPEG---ERYFGLENFGNTCYCNSVLQALYFCVPFREELLEYYSSNKNPSEGD-----------------ENLLTCLAELFSQISSQKKKTGVIAPKRFVQRVRKQNELFRGYMHQDAHEFLNFLLNELAD 134          
BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: I3SBJ3_LOTJA (USP domain-containing protein n=1 Tax=Lotus japonicus TaxID=34305 RepID=I3SBJ3_LOTJA)

HSP 1 Score: 120 bits (302), Expect = 5.810e-30
Identity = 67/141 (47.52%), Postives = 88/141 (62.41%), Query Frame = 0
Query:   24 TKLEREFGD-IGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMAD 163
            +KLE+  GD   +G   ER+FGLENFGNTCYCNSVLQALYFC P R  L +    + S G                    + +L+ LA+LFS IS QK+++G +AP  F++ L+++NELFR    QDAHEF NF+LNE+ D
Sbjct:    6 SKLEKALGDQFPEG---ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSIGDPE-----------------ENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVD 126          
BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: C6SWJ8_SOYBN (USP domain-containing protein n=1 Tax=Glycine max TaxID=3847 RepID=C6SWJ8_SOYBN)

HSP 1 Score: 119 bits (298), Expect = 6.220e-30
Identity = 69/149 (46.31%), Postives = 89/149 (59.73%), Query Frame = 0
Query:   16 MGVGASHQTKLEREFGD-IGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMAD 163
            MG   S   KLE+  GD   +G   ER+FGLENFGNTCYCNSVLQALYFC P R  L +    + S                      + +L+ LA+LFS IS QK+++G +AP  F++ L+++NELFR    QDAHEF NF+LNE+ D
Sbjct:    1 MGAAGS---KLEKALGDQFPEG---ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKS-----------------ITDAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVD 126          
BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: A0A7R9TMU0_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TMU0_9VIRI)

HSP 1 Score: 119 bits (297), Expect = 7.380e-30
Identity = 68/159 (42.77%), Postives = 93/159 (58.49%), Query Frame = 0
Query:   16 MGVGASHQTKLEREFGDIGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMADSVAARRKLREE 174
            MG  +S   KLE+   +   GDG+ER+FGLENFGNTCYCNSVLQAL FC P R  L +  E      SS                  +++L+ LA+L + I+  K+R+G +AP +F+  L+  NELF G   QDAHEF N++LNE+A+ +  + K   E
Sbjct:    1 MGTSSS---KLEKALAES-SGDGEERYFGLENFGNTCYCNSVLQALMFCRPFRERLLRYHEAIEELPSSERPP--------------ESLLTCLADLVAQIASSKKRTGVIAPRKFVHRLKRDNELFSGYMHQDAHEFVNYLLNELAELLEKQEKAARE 141          
BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: B9SZ50_RICCO (Ubiquitin carboxyl-terminal hydrolase, putative n=4 Tax=rosids TaxID=71275 RepID=B9SZ50_RICCO)

HSP 1 Score: 124 bits (312), Expect = 7.790e-30
Identity = 70/149 (46.98%), Postives = 92/149 (61.74%), Query Frame = 0
Query:   16 MGVGASHQTKLEREFGD-IGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMAD 163
            MG   S   KLE+  GD   +G   ER+FGLENFGNTCYCNSVLQALYFC P R  L +    + SGG +                  + +L+ LA+LF+ IS QK+++G +AP  F++ L+++NELFR    QDAHEF NF+LNE+ D
Sbjct:    1 MGAAGS---KLEKALGDQFPEG---ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSGGDAE-----------------ENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVD 126          
BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: A0A453QTL8_AEGTS (USP domain-containing protein n=3 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453QTL8_AEGTS)

HSP 1 Score: 120 bits (302), Expect = 1.770e-29
Identity = 70/162 (43.21%), Postives = 95/162 (58.64%), Query Frame = 0
Query:   14 AVMGVGASHQTKLEREFGD-IGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMADSVAARRKLREE 174
            AVMG  +S   +LE+  G+   +G   ER+FGLENFGNTCYCNSVLQALYFC   R  L +    + S                      + +L+ LA+LFS IS QK+++G +AP  F++ L+++NELFR    QDAHEF NF+LNE+ D +    K  +E
Sbjct:   41 AVMGAASS---RLEKALGEQFPEG---ERYFGLENFGNTCYCNSVLQALYFCVSFREQLLEYYANNKSASDGE-----------------ENMLTCLADLFSQISNQKKKTGVIAPKRFIQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKECKANKE 179          
BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: UPI0010367DD5 (ubiquitin carboxyl-terminal hydrolase 3-like isoform X1 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010367DD5)

HSP 1 Score: 123 bits (309), Expect = 2.110e-29
Identity = 69/147 (46.94%), Postives = 94/147 (63.95%), Query Frame = 0
Query:   18 VGASHQTKLEREFGD-IGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMAD 163
            +GAS  +KLE+  GD   +G   ER+FGLENFGNTCYCNSVLQALYFC P R  L +    + + G +                  + +L+ LA+LF+ IS QK+++G +AP  F++ L+++NELFRG   QDAHEF NF+LNE+ D
Sbjct:    1 MGAS-GSKLEKALGDQFPEG---ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKNPGDAE-----------------ENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRGYMHQDAHEFLNFLLNELVD 126          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBJ3_ECTSI2.320e-9492.11Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ecto... [more]
A0A835Z200_9STRA4.280e-3649.03Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Trib... [more]
A0A5A7QT99_STRAF8.440e-3147.33Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Orob... [more]
UPI000C1CFA102.290e-3048.00ubiquitin carboxyl-terminal hydrolase 3-like n=1 T... [more]
I3SBJ3_LOTJA5.810e-3047.52USP domain-containing protein n=1 Tax=Lotus japoni... [more]
C6SWJ8_SOYBN6.220e-3046.31USP domain-containing protein n=1 Tax=Glycine max ... [more]
A0A7R9TMU0_9VIRI7.380e-3042.77Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
B9SZ50_RICCO7.790e-3046.98Ubiquitin carboxyl-terminal hydrolase, putative n=... [more]
A0A453QTL8_AEGTS1.770e-2943.21USP domain-containing protein n=3 Tax=Aegilops tau... [more]
UPI0010367DD52.110e-2946.94ubiquitin carboxyl-terminal hydrolase 3-like isofo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 168..188
NoneNo IPR availableGENE3D3.90.70.10coord: 20..236
e-value: 7.8E-34
score: 119.1
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 13..194
NoneNo IPR availablePANTHERPTHR24006:SF756coord: 13..194
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 43..200
e-value: 6.2E-26
score: 91.4
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 44..59
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 43..269
score: 20.405
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 42..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1360contigE-fasciculatus_F_contig1360:16396..18429 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1360.2681.1mRNA_E-fasciculatus_F_contig1360.2681.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1360 16396..18429 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1360.2681.1 ID=prot_E-fasciculatus_F_contig1360.2681.1|Name=mRNA_E-fasciculatus_F_contig1360.2681.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=269bp
RCIHHRLSCRHLHAVMGVGASHQTKLEREFGDIGDGDGQERFFGLENFGN
TCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSGDSSSNSGGGGGSGGS
SGKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDA
HEFFNFVLNEMADSVAARRKLREEAATVQEHKQRFQQNGSHHHRQTHGSN
GNAQTGSSQQQQQQQQQQQQQDPRRSSTWSKMSSFKGSFGNGLKNASQPA
SAAEGAAAAAAQSVASAAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain-like_cys_pep_sf
IPR028889USP_dom
IPR018200USP_CS
IPR001394Peptidase_C19_UCH