mRNA_E-fasciculatus_F_contig1360.2681.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1360.2681.1
Unique NamemRNA_E-fasciculatus_F_contig1360.2681.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: D8LBJ3_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBJ3_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 2.320e-94
Identity = 210/228 (92.11%), Postives = 210/228 (92.11%), Query Frame = 1 
Query:   46 MGVGASHQTKLEREFGDIGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMADSVAARRKLREEAATVQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRSSTWSKMSSFKGSFGNGL 729
            MGVGASHQTKLEREFGDIGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREED SGG  XXXXXXXXXXXXXX    KTVLSELAELFSSIS QKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMADSV ARRKLREEAATVQE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       PRRSSTWSKMSSFKGSFGNGL
Sbjct:    1 MGVGASHQTKLEREFGDIGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDTSGGXXXXXXXXXXXXXXXXSG--KTVLSELAELFSSISNQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMADSVVARRKLREEAATVQEHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------PRRSSTWSKMSSFKGSFGNGL 219
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BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: A0A835Z200_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z200_9STRA)

HSP 1 Score: 141 bits (355), Expect = 4.280e-36
Identity = 76/155 (49.03%), Postives = 100/155 (64.52%), Query Frame = 1 
Query:   46 MGVGASHQTKLEREFGDIGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSG-----GSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMADSV 495
            MG G+S  +KLE++ G     +  ER++GLENFGNTCYCNSV+QALYFC PLR  L     ++ S      GSS                   ++L +LAELF+ I+  KR SG +AP  F++TLRE NELFRGN QQDAHEF+NF++N+MAD++
Sbjct:    1 MGTGSSSPSKLEQDLGYTEPVEAGERYYGLENFGNTCYCNSVMQALYFCGPLRTELLARHTQNSSATVMATGSSQYPAG--------------SLLYQLAELFAVITNTKRLSGRVAPQAFMQTLRETNELFRGNMQQDAHEFYNFIINDMADTL 141
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BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: A0A5A7QT99_STRAF (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Orobanchaceae TaxID=91896 RepID=A0A5A7QT99_STRAF)

HSP 1 Score: 127 bits (319), Expect = 8.440e-31
Identity = 71/150 (47.33%), Postives = 91/150 (60.67%), Query Frame = 1 
Query:   43 VMGVGASHQTKLEREFGD-IGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMAD 489
             MGV  S   KLE+  GD   +G   ER+FGLENFGNTCYCNSVLQALYFC P R HL +    + + G +                  + +L+ LAELFS IS QK+++G +AP  F++ +R  NE FRG   QDAHEF N++LNE+ D
Sbjct:    8 AMGVAGS---KLEKALGDQFPEG---ERYFGLENFGNTCYCNSVLQALYFCAPFREHLLEYYSNNKNQGEAD-----------------ENILTCLAELFSQISSQKKKTGVIAPKRFVQRIRRENENFRGYMHQDAHEFLNYLLNELVD 134
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BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: UPI000C1CFA10 (ubiquitin carboxyl-terminal hydrolase 3-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CFA10)

HSP 1 Score: 126 bits (316), Expect = 2.290e-30
Identity = 72/150 (48.00%), Postives = 92/150 (61.33%), Query Frame = 1 
Query:   43 VMGVGASHQTKLEREFGD-IGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMAD 489
             MGV  S   KLE+  GD   +G   ER+FGLENFGNTCYCNSVLQALYFC P R  L +    + +                      + +L+ LAELFS IS QK+++G +AP  F++ +R++NELFRG   QDAHEF NF+LNE+AD
Sbjct:    8 TMGVAGS---KLEKALGDHFPEG---ERYFGLENFGNTCYCNSVLQALYFCVPFREELLEYYSSNKNPSEGD-----------------ENLLTCLAELFSQISSQKKKTGVIAPKRFVQRVRKQNELFRGYMHQDAHEFLNFLLNELAD 134
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BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: I3SBJ3_LOTJA (USP domain-containing protein n=1 Tax=Lotus japonicus TaxID=34305 RepID=I3SBJ3_LOTJA)

HSP 1 Score: 120 bits (302), Expect = 5.810e-30
Identity = 67/141 (47.52%), Postives = 88/141 (62.41%), Query Frame = 1 
Query:   70 TKLEREFGD-IGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMAD 489
            +KLE+  GD   +G   ER+FGLENFGNTCYCNSVLQALYFC P R  L +    + S G                    + +L+ LA+LFS IS QK+++G +AP  F++ L+++NELFR    QDAHEF NF+LNE+ D
Sbjct:    6 SKLEKALGDQFPEG---ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSIGDPE-----------------ENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVD 126
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BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: C6SWJ8_SOYBN (USP domain-containing protein n=1 Tax=Glycine max TaxID=3847 RepID=C6SWJ8_SOYBN)

HSP 1 Score: 119 bits (298), Expect = 6.220e-30
Identity = 69/149 (46.31%), Postives = 89/149 (59.73%), Query Frame = 1 
Query:   46 MGVGASHQTKLEREFGD-IGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMAD 489
            MG   S   KLE+  GD   +G   ER+FGLENFGNTCYCNSVLQALYFC P R  L +    + S                      + +L+ LA+LFS IS QK+++G +AP  F++ L+++NELFR    QDAHEF NF+LNE+ D
Sbjct:    1 MGAAGS---KLEKALGDQFPEG---ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKS-----------------ITDAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVD 126
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BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: A0A7R9TMU0_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TMU0_9VIRI)

HSP 1 Score: 119 bits (297), Expect = 7.380e-30
Identity = 68/159 (42.77%), Postives = 93/159 (58.49%), Query Frame = 1 
Query:   46 MGVGASHQTKLEREFGDIGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMADSVAARRKLREE 522
            MG  +S   KLE+   +   GDG+ER+FGLENFGNTCYCNSVLQAL FC P R  L +  E      SS                  +++L+ LA+L + I+  K+R+G +AP +F+  L+  NELF G   QDAHEF N++LNE+A+ +  + K   E
Sbjct:    1 MGTSSS---KLEKALAES-SGDGEERYFGLENFGNTCYCNSVLQALMFCRPFRERLLRYHEAIEELPSSERPP--------------ESLLTCLADLVAQIASSKKRTGVIAPRKFVHRLKRDNELFSGYMHQDAHEFVNYLLNELAELLEKQEKAARE 141
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BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: B9SZ50_RICCO (Ubiquitin carboxyl-terminal hydrolase, putative n=4 Tax=rosids TaxID=71275 RepID=B9SZ50_RICCO)

HSP 1 Score: 124 bits (312), Expect = 7.790e-30
Identity = 70/149 (46.98%), Postives = 92/149 (61.74%), Query Frame = 1 
Query:   46 MGVGASHQTKLEREFGD-IGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMAD 489
            MG   S   KLE+  GD   +G   ER+FGLENFGNTCYCNSVLQALYFC P R  L +    + SGG +                  + +L+ LA+LF+ IS QK+++G +AP  F++ L+++NELFR    QDAHEF NF+LNE+ D
Sbjct:    1 MGAAGS---KLEKALGDQFPEG---ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSGGDAE-----------------ENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVD 126
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BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: A0A453QTL8_AEGTS (USP domain-containing protein n=3 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453QTL8_AEGTS)

HSP 1 Score: 120 bits (302), Expect = 1.770e-29
Identity = 70/162 (43.21%), Postives = 95/162 (58.64%), Query Frame = 1 
Query:   40 AVMGVGASHQTKLEREFGD-IGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMADSVAARRKLREE 522
            AVMG  +S   +LE+  G+   +G   ER+FGLENFGNTCYCNSVLQALYFC   R  L +    + S                      + +L+ LA+LFS IS QK+++G +AP  F++ L+++NELFR    QDAHEF NF+LNE+ D +    K  +E
Sbjct:   41 AVMGAASS---RLEKALGEQFPEG---ERYFGLENFGNTCYCNSVLQALYFCVSFREQLLEYYANNKSASDGE-----------------ENMLTCLADLFSQISNQKKKTGVIAPKRFIQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKECKANKE 179
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BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Match: UPI0010367DD5 (ubiquitin carboxyl-terminal hydrolase 3-like isoform X1 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010367DD5)

HSP 1 Score: 123 bits (309), Expect = 2.110e-29
Identity = 69/147 (46.94%), Postives = 94/147 (63.95%), Query Frame = 1 
Query:   52 VGASHQTKLEREFGD-IGDGDGQERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSXXXXXXXXXXXXXXXXXXKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMAD 489
            +GAS  +KLE+  GD   +G   ER+FGLENFGNTCYCNSVLQALYFC P R  L +    + + G +                  + +L+ LA+LF+ IS QK+++G +AP  F++ L+++NELFRG   QDAHEF NF+LNE+ D
Sbjct:    1 MGAS-GSKLEKALGDQFPEG---ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKNPGDAE-----------------ENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRGYMHQDAHEFLNFLLNELVD 126
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1360.2681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBJ3_ECTSI2.320e-9492.11Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ecto... [more]
A0A835Z200_9STRA4.280e-3649.03Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Trib... [more]
A0A5A7QT99_STRAF8.440e-3147.33Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Orob... [more]
UPI000C1CFA102.290e-3048.00ubiquitin carboxyl-terminal hydrolase 3-like n=1 T... [more]
I3SBJ3_LOTJA5.810e-3047.52USP domain-containing protein n=1 Tax=Lotus japoni... [more]
C6SWJ8_SOYBN6.220e-3046.31USP domain-containing protein n=1 Tax=Glycine max ... [more]
A0A7R9TMU0_9VIRI7.380e-3042.77Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
B9SZ50_RICCO7.790e-3046.98Ubiquitin carboxyl-terminal hydrolase, putative n=... [more]
A0A453QTL8_AEGTS1.770e-2943.21USP domain-containing protein n=3 Tax=Aegilops tau... [more]
UPI0010367DD52.110e-2946.94ubiquitin carboxyl-terminal hydrolase 3-like isofo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1360contigE-fasciculatus_F_contig1360:16396..18429 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score297.0
Seed ortholog evalue9e-78
Seed eggNOG ortholog2880.D8LBJ3
Preferred nameUSP46
KEGG koko:K11842,ko:K11872
GOsGO:0000578,GO:0001662,GO:0002209,GO:0002682,GO:0002684,GO:0003002,GO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0004843,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005829,GO:0006355,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006897,GO:0006950,GO:0006952,GO:0007154,GO:0007275,GO:0007350,GO:0007351,GO:0007389,GO:0007584,GO:0007610,GO:0007631,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008343,GO:0008593,GO:0008595,GO:0009056,GO:0009057,GO:0009605,GO:0009636,GO:0009790,GO:0009798,GO:0009880,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009948,GO:0009952,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010469,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010992,GO:0010995,GO:0012505,GO:0016043,GO:0016192,GO:0016579,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0019725,GO:0019783,GO:0019941,GO:0022411,GO:0022898,GO:0023051,GO:0023056,GO:0023057,GO:0030163,GO:0030534,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031974,GO:0031981,GO:0031982,GO:0032228,GO:0032409,GO:0032412,GO:0032501,GO:0032502,GO:0032879,GO:0032984,GO:0033555,GO:0034762,GO:0034765,GO:0035254,GO:0035255,GO:0035282,GO:0035871,GO:0036211,GO:0036459,GO:0036477,GO:0040012,GO:0040017,GO:0042221,GO:0042493,GO:0042592,GO:0042596,GO:0043025,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043269,GO:0043412,GO:0043624,GO:0043632,GO:0043933,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045013,GO:0045471,GO:0045746,GO:0045892,GO:0045934,GO:0045990,GO:0046677,GO:0048149,GO:0048518,GO:0048519,GO:0048520,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048856,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050795,GO:0050804,GO:0050854,GO:0050856,GO:0050857,GO:0050862,GO:0050896,GO:0051049,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051261,GO:0051603,GO:0051716,GO:0060004,GO:0060013,GO:0060255,GO:0061984,GO:0061985,GO:0065007,GO:0065008,GO:0065009,GO:0070011,GO:0070013,GO:0070646,GO:0070647,GO:0070887,GO:0071108,GO:0071496,GO:0071704,GO:0071840,GO:0071947,GO:0080090,GO:0090325,GO:0090326,GO:0097305,GO:0097458,GO:0097708,GO:0098657,GO:0099177,GO:0099601,GO:0101005,GO:0140096,GO:1900449,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1902679,GO:1903506,GO:1903507,GO:1904062,GO:2000112,GO:2000113,GO:2000311,GO:2001141,GO:2001257
EggNOG free text desc.ubiquitinyl hydrolase activity
EggNOG OGsKOG1864@1,KOG1864@2759
EC3.4.19.12
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Hectar predicted targeting categoryother localisation
Exons3
Model size808
Cds size807
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1360.2681.1prot_E-fasciculatus_F_contig1360.2681.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1360 16396..18429 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927857.9811285-CDS-E-fasciculatus_F_contig1360:16395..165721622927857.9811285-CDS-E-fasciculatus_F_contig1360:16395..16572Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1360 16396..16572 +
1695995726.0912633-CDS-E-fasciculatus_F_contig1360:16395..165721695995726.0912633-CDS-E-fasciculatus_F_contig1360:16395..16572Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1360 16396..16572 +
1622927857.993014-CDS-E-fasciculatus_F_contig1360:17299..175661622927857.993014-CDS-E-fasciculatus_F_contig1360:17299..17566Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1360 17300..17566 +
1695995726.1135497-CDS-E-fasciculatus_F_contig1360:17299..175661695995726.1135497-CDS-E-fasciculatus_F_contig1360:17299..17566Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1360 17300..17566 +
1622927858.0033233-CDS-E-fasciculatus_F_contig1360:18066..184291622927858.0033233-CDS-E-fasciculatus_F_contig1360:18066..18429Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1360 18067..18429 +
1695995726.1292226-CDS-E-fasciculatus_F_contig1360:18066..184291695995726.1292226-CDS-E-fasciculatus_F_contig1360:18066..18429Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1360 18067..18429 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1360.2681.1

>prot_E-fasciculatus_F_contig1360.2681.1 ID=prot_E-fasciculatus_F_contig1360.2681.1|Name=mRNA_E-fasciculatus_F_contig1360.2681.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=269bp
RCIHHRLSCRHLHAVMGVGASHQTKLEREFGDIGDGDGQERFFGLENFGN
TCYCNSVLQALYFCEPLRHHLAQVREEDVSGGSSGDSSSNSGGGGGSGGS
SGKTVLSELAELFSSISKQKRRSGHLAPTEFLRTLRERNELFRGNRQQDA
HEFFNFVLNEMADSVAARRKLREEAATVQEHKQRFQQNGSHHHRQTHGSN
GNAQTGSSQQQQQQQQQQQQQDPRRSSTWSKMSSFKGSFGNGLKNASQPA
SAAEGAAAAAAQSVASAAE
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mRNA from alignment at E-fasciculatus_F_contig1360:16396..18429+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1360.2681.1 ID=mRNA_E-fasciculatus_F_contig1360.2681.1|Name=mRNA_E-fasciculatus_F_contig1360.2681.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2034bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1360:16396..18429+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGATGCATACACCACCGCCTGTCCTGCAGGCACCTCCACGCAGTCATGGG
CGTCGGCGCCTCGCATCAAACAAAGCTCGAGCGTGAGTTCGGAGACATCG
GCGATGGCGATGGACAGGAGAGGTTCTTCGGCCTCGAGAACTTCGGCAAC
ACCTGCTACTGCAACTCTGTGCTGCAGGTGAGAAGTGAGAAGAGTGCTGC
TGTAGACTATTCCTGTTCGGATGCTGTGTCCCTTCTTCTTCGGCAACGGA
CACGCACTGCCAGCTTAGGGCGTCTGGCTGAAGTCGCATCGTGTCTTCAC
GACGCTCGCTCGTCAACGGCTGTACGTCAGAGCTCACACGCGTCAGAGAA
CAGAGTGTTGTCACAAAACATTAACATTCCGCACCTACAGCAGCACGATG
CACCTGGGTGCTGGGACAACTGCTGTTGCGAAAAGGAGCCCACGTCTATG
TAGCTACCCATGTCAAAGACGCAGCGTAACCTCTCTGGCGCACCTGTCTT
TCTCCGCGCTCCCGCCGACTGATTACGAATACTCATGTCACCCTTGGGTG
ACGAACGGCGCATCTTACTCTCTTTCTCTCTCTGGGTTATTCCTTTCGCC
AGTAATTTGGTCATCCTCGACCGCCCCATCTACAGAATGCCTCTCTACGC
TATGCTCAACATAAACTTGCACCGCACGTGAAAGGGTAGACTAGTCTACA
CGGTACATGATACCGCTGCTGTCTGTGTTCTTACACGCCTGGTTCAAACT
CTTCCGGTGTTCGTCATCAAAGACACTGCTGTCTGGGAACGTTGTTTTTG
GCGCTAAGAGAGCTGTTGGCGTCGGGGATGACACCCACCCCGCTTTACTC
CGTCTCCGCCGTGCCGCCCGCCCGACCGACCGACACACACACACACACAC
ACAGGCGCTCTACTTTTGCGAGCCGTTGCGACATCACCTCGCGCAAGTAC
GAGAGGAAGACGTGAGTGGCGGCAGCAGCGGAGATAGCAGTAGTAATAGT
GGCGGGGGTGGGGGTAGCGGGGGCAGCAGCGGCAAGACCGTTCTGTCGGA
GTTGGCGGAGCTATTCTCGTCCATCTCCAAGCAGAAGCGGCGGTCTGGAC
ACCTGGCGCCGACGGAATTCCTCCGCACCCTGCGGGAACGCAACGAGCTC
TTCCGTGGTAACAGACAGCAGGTGGGTGAAGGAGATGTGGTGATAAAATC
TCGCCTGATAGGGGCACGTGGTTGTTTCGGCAGCTACTCCTGCCGTGTCG
GTGTCGGCGCATGGCTGTCTATCTTTACTTTTCAGGGTGTTGATTTGAAG
GCTTGGGGGACGGAGAGGGGATTTTGTTGGCCGCCGGTCGAGGCAGATCC
CCCCATCCTTTCATCCGTGTACGTGCTGATCTTGTCATCGACCAACTACT
ACGTGGGATGCGGTGAGTTGCTCGACGCGGCGCCGGTCAGAGCTTTCGAG
TTTATCTTCGGTGAGCCATACAATACCACGATCGGGTAGTGTGCCCGCAG
TTCTTGACCACGTATGTGCGCGTGGTCGATGCAACAGGTTAGGAATGCGC
GGTTCGCTCGAGCGAGGGTGGTTGAGGTCACGTTCCATGCAACGGTTCTT
CCCAGCTTCCCCGCCCAGACTTGACGAAAACGTTGAAATGTGTTTCCTTG
CTTGCTTGCTTTCTCCTATAGGATGCCCACGAGTTCTTCAACTTCGTGCT
GAACGAGATGGCGGATAGTGTGGCGGCTAGGAGGAAGCTGCGGGAAGAGG
CGGCCACCGTTCAGGAGCACAAGCAGCGCTTCCAGCAAAACGGAAGCCAT
CACCACCGCCAGACACACGGCAGCAACGGCAATGCTCAGACTGGTTCTTC
CCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGACCCGCGAC
GATCGTCCACCTGGTCCAAGATGTCCTCCTTCAAGGGCAGCTTCGGGAAC
GGGTTGAAGAACGCCTCGCAGCCGGCATCTGCGGCGGAGGGAGCGGCCGC
AGCGGCGGCACAATCGGTAGCATCAGCAGCAGAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1360:16396..18429+

>mRNA_E-fasciculatus_F_contig1360.2681.1 ID=mRNA_E-fasciculatus_F_contig1360.2681.1|Name=mRNA_E-fasciculatus_F_contig1360.2681.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1614bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1360:16396..18429+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGATGCATACACCACCGCCTGTCCTGCAGGCACCTCCACGCAGTCATGGG
CGTCGGCGCCTCGCATCAAACAAAGCTCGAGCGTGAGTTCGGAGACATCG
GCGATGGCGATGGACAGGAGAGGTTCTTCGGCCTCGAGAACTTCGGCAAC
ACCTGCTACTGCAACTCTGTGCTGCAGAGATGCATACACCACCGCCTGTC
CTGCAGGCACCTCCACGCAGTCATGGGCGTCGGCGCCTCGCATCAAACAA
AGCTCGAGCGTGAGTTCGGAGACATCGGCGATGGCGATGGACAGGAGAGG
TTCTTCGGCCTCGAGAACTTCGGCAACACCTGCTACTGCAACTCTGTGCT
GCAGGCGCTCTACTTTTGCGAGCCGTTGCGACATCACCTCGCGCAAGTAC
GAGAGGAAGACGTGAGTGGCGGCAGCAGCGGAGATAGCAGTAGTAATAGT
GGCGGGGGTGGGGGTAGCGGGGGCAGCAGCGGCAAGACCGTTCTGTCGGA
GTTGGCGGAGCTATTCTCGTCCATCTCCAAGCAGAAGCGGCGGTCTGGAC
ACCTGGCGCCGACGGAATTCCTCCGCACCCTGCGGGAACGCAACGAGCTC
TTCCGTGGTAACAGACAGCAGGCGCTCTACTTTTGCGAGCCGTTGCGACA
TCACCTCGCGCAAGTACGAGAGGAAGACGTGAGTGGCGGCAGCAGCGGAG
ATAGCAGTAGTAATAGTGGCGGGGGTGGGGGTAGCGGGGGCAGCAGCGGC
AAGACCGTTCTGTCGGAGTTGGCGGAGCTATTCTCGTCCATCTCCAAGCA
GAAGCGGCGGTCTGGACACCTGGCGCCGACGGAATTCCTCCGCACCCTGC
GGGAACGCAACGAGCTCTTCCGTGGTAACAGACAGCAGGATGCCCACGAG
TTCTTCAACTTCGTGCTGAACGAGATGGCGGATAGTGTGGCGGCTAGGAG
GAAGCTGCGGGAAGAGGCGGCCACCGTTCAGGAGCACAAGCAGCGCTTCC
AGCAAAACGGAAGCCATCACCACCGCCAGACACACGGCAGCAACGGCAAT
GCTCAGACTGGTTCTTCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGGACCCGCGACGATCGTCCACCTGGTCCAAGATGTCCTCCTTCA
AGGGCAGCTTCGGGAACGGGTTGAAGAACGCCTCGCAGCCGGCATCTGCG
GCGGAGGGAGCGGCCGCAGCGGCGGCACAATCGGTAGCATCAGCAGCAGA
AGATGCCCACGAGTTCTTCAACTTCGTGCTGAACGAGATGGCGGATAGTG
TGGCGGCTAGGAGGAAGCTGCGGGAAGAGGCGGCCACCGTTCAGGAGCAC
AAGCAGCGCTTCCAGCAAAACGGAAGCCATCACCACCGCCAGACACACGG
CAGCAACGGCAATGCTCAGACTGGTTCTTCCCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGGACCCGCGACGATCGTCCACCTGGTCCAAG
ATGTCCTCCTTCAAGGGCAGCTTCGGGAACGGGTTGAAGAACGCCTCGCA
GCCGGCATCTGCGGCGGAGGGAGCGGCCGCAGCGGCGGCACAATCGGTAG
CATCAGCAGCAGAA
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