mRNA_E-fasciculatus_F_contig13596.2675.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13596.2675.1
Unique NamemRNA_E-fasciculatus_F_contig13596.2675.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13596.2675.1 vs. uniprot
Match: D8LLX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX1_ECTSI)

HSP 1 Score: 503 bits (1295), Expect = 1.380e-170
Identity = 393/449 (87.53%), Postives = 396/449 (88.20%), Query Frame = 1
Query:    1 TSPHLKVGLLAETLLEAAAQDNALTGAEVARLREETRAAKRKLAQARRERALKAMGVRATGAGKSCAVSTAAAAGAEDGESAATGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTGGXXXXXXXXXXXXXXXXXXXXAVATPAWMSEMMGLEEEAGLTCMVCHEGYQCKPRAVLGVYVYAKPVLGKDLHELEGDFLLDPADLPAAPEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGDGGIDAAAQGLDRLVGIVASRAMAQGGXXXXXXXXXXXXXXXDAVAALERCCRGEGRSGXXXXXXXXXXXXXXXXAALVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLVQDVRLLLSRLAHQESLSADCGGGAARSNIQLIPYQLQV 1347
            TS   +VGLLAETLLEAAAQDNALTGAEV RLREETRAAKRKLAQARRERALKAMGVRA G GKS AVST                  XXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXX  ATPAWMSEMMGLEEEAGLTCMVCHEGYQCKPRAVLGVYVYAKPVLGKDLHELEGDFLLDPADLPAA EAGXXXXXXXXXXXXXXXXXXXXXXXXX    GEGDGGIDAAAQGLDRLVGIVASRAM QGG    XXXXX      DAVAALERCCRGEGRSG XXXXXXXXXXXXXXX ALVSTVAAFNVIHVSCH EAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLL+QDVRLLL RLAHQESLSADCGGGAARSNIQ+IPYQLQ 
Sbjct:  143 TSTSGEVGLLAETLLEAAAQDNALTGAEVTRLREETRAAKRKLAQARRERALKAMGVRAAGTGKSSAVSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXAATPAWMSEMMGLEEEAGLTCMVCHEGYQCKPRAVLGVYVYAKPVLGKDLHELEGDFLLDPADLPAATEAGXXXXXXXXXXXXXXXXXXXXXXXXX----GEGDGGIDAAAQGLDRLVGIVASRAM-QGGGNAGXXXXXRARAHADAVAALERCCRGEGRSGGXXXXXXXXXXXXXXXXALVSTVAAFNVIHVSCHQEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQVIPYQLQA 584          
BLAST of mRNA_E-fasciculatus_F_contig13596.2675.1 vs. uniprot
Match: A0A6H5J981_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J981_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 2.370e-126
Identity = 333/455 (73.19%), Postives = 337/455 (74.07%), Query Frame = 1
Query:    1 TSPHLKVGLLAETLLEAAAQDNALTGAEVARLREETRAAKRKLAQARRERALKAMGVRATGAGKSCAVSTAAAAGAEDGESAATGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTGGXXXXXXXXXXXXXXXXXXXXAVATPAWMSEMMGLEEEAGLTCMVCHEGYQCKPRAVLGVYVYAKPVLGKDLHELEGDFLLDPADLPAAPEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGDGGIDAAAQGLDRLVGIVASRAMAQGGXXXXXXXXXXXXXXXDAVAALERCCRGEGRSGXXXXXXXXXXXXXXXXA------ALVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLVQDVRLLLSRLAHQESLSADCGGGAARSNIQLIPYQLQV 1347
            TS   +VGLLAETLLEA AQDNALTGAE+ RLR+ETRAAKRKLAQARRERALKAMGVRATGAGKSCAVSTA                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXX A  TPAWMSEMMGLEEEAGLTCMVCHEGYQCK                                                                     GEGD GIDAAAQGLDRLVGIVASRAMA GG  XXXXXXXXXXX  DAVAALERCCRGEGRSG  XXXXXXXXXXXXXX       ALVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRS TTPDERYQAGLDRHMANLGEVLQGQ FAPRLPLL+QDVRLLL RLAHQESLSADCGGGAARSNIQLIPYQLQ 
Sbjct: 7971 TSTSGEVGLLAETLLEAVAQDNALTGAEITRLRDETRAAKRKLAQARRERALKAMGVRATGAGKSCAVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAATTPAWMSEMMGLEEEAGLTCMVCHEGYQCKD------------------------------------------------------------------DDGEGDVGIDAAAQGLDRLVGIVASRAMAHGGGNXXXXXXXXXXXHADAVAALERCCRGEGRSGGGXXXXXXXXXXXXXXXXXXXXXALVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRSSTTPDERYQAGLDRHMANLGEVLQGQNFAPRLPLLIQDVRLLLLRLAHQESLSADCGGGAARSNIQLIPYQLQA 8359          
BLAST of mRNA_E-fasciculatus_F_contig13596.2675.1 vs. uniprot
Match: A0A4D9DHT1_9STRA (ZZ-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DHT1_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.030e-36
Identity = 117/317 (36.91%), Postives = 153/317 (48.26%), Query Frame = 1
Query:  442 WMSEMMGLEEEAGLTCMVCHEGYQCKPRAVLGVYVYAKPVLGKDLHELEGDFLLDPAD--------------LPAAPEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGE-GDGGIDAAAQGLDRLVGIVASRAMAQGGXXXXXXXXXXXXXXXDAVAALERCCRGEGRSGXXXXXXXXXXXXXXXXAALVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLVQDVRLLLSRLAHQESLSADCGGGAARSNIQLIPYQLQV 1347
            W+ ++ GL EE GL C VC EG   KP  VLGVY+Y+K V   D+  LEGD ++   D                A P +GXXXXXXXXXXX                   E G+ G D   +G         +    +                    A   R CR                        LV+TV+AFN+IH+SCH EAARADR ++ PK EWEGA+LRNSRV  N LLP+R P T  + +   +D+H A L +     A   RL L+  DVR LL R+++ +SL  D GGG+  SN++L+PYQL +
Sbjct: 4584 WLKDLQGLPEEPGLACEVCQEGLALKPTEVLGVYIYSKGVGPCDVASLEGDIVMLSRDNSRSSDGSEASTVTTAAGPTSGXXXXXXXXXXXVSTTALLRARTLIEPFGQEEMGEEGRDVEERG---------NGGRGRNFTWGRRHLLASASSSSPPSAGSRRSCR------------------------LVTTVSAFNLIHLSCHAEAARADRVLKQPKGEWEGASLRNSRVRANGLLPIRGPHTSPDAFSQAVDKHFARL-KAFHQHASVSRLGLVAHDVRFLLLRVSYGDSLRKDSGGGSLSSNLKLVPYQLAM 4866          
BLAST of mRNA_E-fasciculatus_F_contig13596.2675.1 vs. uniprot
Match: I2CNY7_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CNY7_NANGC)

HSP 1 Score: 154 bits (388), Expect = 1.100e-36
Identity = 116/312 (37.18%), Postives = 154/312 (49.36%), Query Frame = 1
Query:  442 WMSEMMGLEEEAGLTCMVCHEGYQCKPRAVLGVYVYAKPVLGKDLHELEGDFLLDPADLPAAP----------EAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGDGGIDAAAQGLDRLVGIVASRAMAQGGXXXXXXXXXXXXXXXDAVAALERCCRGEGRSGXXXXXXXXXXXXXXXXAALVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLVQDVRLLLSRLAHQESLSADCGGGAARSNIQLIPYQLQV 1347
            W+ ++ GL EE GL C VC EG   KP  VLGVY+Y+K V   D+  LEGD ++   D   +            AG   XXXXXXXXXXXX                G   +    +G++        R    G                 + A   R CR                        LV+TV+AFN+IH+SCH EAARADR ++ PK EWEGA+LRNSRV+ N LLP+R P T  + +   +D+H A L +     A   RL L+  DVR LL R+++ +SL  D GGG+  SN++L+PYQL +
Sbjct:  220 WLKDLQGLPEEPGLACEVCQEGLALKPSEVLGVYIYSKGVGPCDVASLEGDIVMLSRDNSRSSGGSEASTGMTAAGPTSXXXXXXXXXXXXLSTTALLRARTLFEPFGQEEMGEEGRGMEEGENGGRGRNFTWG----RRHLLASASSSPPSSAGSRRSCR------------------------LVTTVSAFNLIHLSCHAEAARADRVLKQPKGEWEGASLRNSRVSANGLLPIRGPQTSPDAFSQAVDKHFARL-KAFHQHAPVSRLGLVAHDVRFLLLRVSYGDSLRKDSGGGSLSSNLKLVPYQLAM 502          
BLAST of mRNA_E-fasciculatus_F_contig13596.2675.1 vs. uniprot
Match: A0A835Z9Y3_9STRA (E3 ubiquitin-protein ligase UBR4-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y3_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.420e-36
Identity = 131/313 (41.85%), Postives = 178/313 (56.87%), Query Frame = 1
Query:  439 AWMSEMMGLEEEAGLTCMVCHEGYQCKPRAVLGVYVYAKPVLGKDLHELEGDFLLDPADLPAAPEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGDGGIDAAAQGLDRLVGIVASRAMAQGGXXXXXXXXXXXXXXXDAVAALERCCRGEGRSGXXXXXXXXXXXXXXXXAALVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRSPT----------TPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLVQDVRLLLSRLAHQESLSADCGGGAARSNIQLIPYQLQV 1347
            +WM EM  LEEE+GL CMVC EGY  +P   LGVYVYA+ +  + L +LEGDFL+         E+  XXXXXXXXXXXXXXXXXXXXXXXXXXXX        +  Q       +VA R ++                      A E     + R+G                  L++TV A N IH+SCH EA R+DR +R PK+EWEGA LRNSRV CNS+LP++ P             ++ +  G+D H ++L EV  G++ + RL L++ D+RLLL +L++QE++ +  GGG+  SN+ L+ +QLQ+
Sbjct: 6025 SWMDEMNALEEESGLACMVCQEGYVLRPAEPLGVYVYARCLQSQRLSDLEGDFLVK--------ESSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPMSPYQ-------VVALRQLS--------------------ADAREYRSEQQQRAGFMTRRRYPSLGGQARVGGLIATVTALNAIHLSCHREAVRSDRGLRNPKTEWEGAALRNSRVLCNSILPIKPPAPASATAAPARNAEDSWSKGVDLHFSHLREV--GKSESSRLALVLHDIRLLLLQLSYQETMRSASGGGSVSSNMTLLWHQLQL 6300          
BLAST of mRNA_E-fasciculatus_F_contig13596.2675.1 vs. uniprot
Match: W7U2B9_9STRA (Zinc finger, ZZ-type n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2B9_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.870e-36
Identity = 116/312 (37.18%), Postives = 154/312 (49.36%), Query Frame = 1
Query:  442 WMSEMMGLEEEAGLTCMVCHEGYQCKPRAVLGVYVYAKPVLGKDLHELEGDFLLDPADLPAAP----------EAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGDGGIDAAAQGLDRLVGIVASRAMAQGGXXXXXXXXXXXXXXXDAVAALERCCRGEGRSGXXXXXXXXXXXXXXXXAALVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLVQDVRLLLSRLAHQESLSADCGGGAARSNIQLIPYQLQV 1347
            W+ ++ GL EE GL C VC EG   KP  VLGVY+Y+K V   D+  LEGD ++   D   +            AG   XXXXXXXXXXXX                G   +    +G++        R    G                 + A   R CR                        LV+TV+AFN+IH+SCH EAARADR ++ PK EWEGA+LRNSRV+ N LLP+R P T  + +   +D+H A L +     A   RL L+  DVR LL R+++ +SL  D GGG+  SN++L+PYQL +
Sbjct: 4379 WLKDLQGLPEEPGLACEVCQEGLALKPSEVLGVYIYSKGVGPCDVASLEGDIVMLSRDNSRSSGGSEASTGMTAAGPTSXXXXXXXXXXXXLSTTALLRARTLFEPFGQEEMGEEGRGMEEGENGGRGRNFTWG----RRHLLASASSSSPSSAGSRRSCR------------------------LVTTVSAFNLIHLSCHAEAARADRVLKQPKGEWEGASLRNSRVSANGLLPIRGPQTSPDAFSQAVDKHFARL-KAFHQHAPVSRLGLVAHDVRFLLLRVSYGDSLRKDSGGGSLSSNLKLVPYQLAM 4661          
BLAST of mRNA_E-fasciculatus_F_contig13596.2675.1 vs. uniprot
Match: A0A7S2G4M4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4M4_9STRA)

HSP 1 Score: 131 bits (330), Expect = 6.530e-32
Identity = 64/129 (49.61%), Postives = 89/129 (68.99%), Query Frame = 1
Query:  961 AALVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLVQDVRLLLSRLAHQESLSADCGGGAARSNIQLIPYQLQV 1347
            A LV++V+AFN IH+SCH +AA+ADR +  PKSE+EGATLRNSR  CNSLLP+  P    + +   ++RH  N+G        A +  LL+ D+RLL  R+AHQE+L  + GGG+  SN++L+ YQLQ+
Sbjct:   76 ATLVTSVSAFNTIHLSCHDQAAKADRNLSKPKSEFEGATLRNSRCKCNSLLPINGPEVSSDAFALAIERHFGNVG------GDASKFRLLLHDMRLLALRIAHQENLRDEVGGGSLSSNVKLLTYQLQL 198          
BLAST of mRNA_E-fasciculatus_F_contig13596.2675.1 vs. uniprot
Match: A0A7S2FLX3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FLX3_9STRA)

HSP 1 Score: 127 bits (320), Expect = 5.910e-31
Identity = 66/129 (51.16%), Postives = 86/129 (66.67%), Query Frame = 1
Query:  961 AALVSTVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLVQDVRLLLSRLAHQESLSADCGGGAARSNIQLIPYQLQV 1347
            ++L +TV+A N+IH+SCH  AARADRA+  PK+EWEGATLRNSRVACNS+LPL  P  P E Y   L+RH   +G      A   R   +  D+RLL  R+ +QE L  D GGG+  SN++L+  QLQ+
Sbjct:   30 SSLHTTVSACNLIHLSCHDSAARADRALSRPKNEWEGATLRNSRVACNSILPLHGPDIPAEVYHKALERHFGCVGAF--ACAALSRFGQVAHDMRLLCLRICYQEPLRDDAGGGSLTSNMKLLALQLQL 156          
BLAST of mRNA_E-fasciculatus_F_contig13596.2675.1 vs. uniprot
Match: A0A6T7HYH0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7HYH0_9STRA)

HSP 1 Score: 125 bits (314), Expect = 3.120e-27
Identity = 134/463 (28.94%), Postives = 185/463 (39.96%), Query Frame = 1
Query:   19 VGLLAETLLEAAAQDNALTGAEVARLREETRAAKRKLAQARRERALKAM---GVRATGAGKSCAVSTAAAAGAEDGE----SAATGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTGGXXXXXXXXXXXXXXXXXXXXAVATPAWMSEMMGLEEEAGLTCMVCHEGYQCKPRAVLGVYVYAKPVL-----GKDLHELEGDFLLD--PADLPAAPEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGDGGIDAAAQGLDRLVGIVASRAMAQGGXXXXXXXXXXXXXXXDAVAALERCCRGEGRSGXXXXXXXXXXXXXXXXAALVSTVAAFNVIHVSCHHEAARADRAM-RVPKSEWEGATLRNSRVACNSLLPLRSPT---TPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLVQDVRLLLSRLAHQESLSADCGGGAARSNIQLIPYQLQVKH 1353
            +GLLAETLL+A A+DN + G ++  LR++TR  KR++A+ RR RAL  M   G     A  + A   A  AG E GE    S                                    S+ G                      A P+WM+EM  +E+EAGLTC VC EG   +P  +LG+Y Y+K V      G    +++G  LL   P+ LP                                                 D L+G        Q                 +A +AL+        SG                   ++TV A N IH +CH  A  ADR   + PKSEWEGA+LRNSRV CN +LPL S      P    ++ L  H +    ++  +  +     ++ DVR LL RL++ E+L+ DCGGG+  SN  L+ YQ+ V H
Sbjct:   25 LGLLAETLLDALAEDNDVVGGKIKELRKKTRDRKRQIAEERRSRALVGMSSFGPLVGAATSASASEHAVTAGREGGELWVASEHPDDVGGVSTNNSGPTSAIASMLGLFARQRLAVTNSSAGSPSDSSPGRRQGAKATDKPKDDAKPSWMAEMEEMEDEAGLTCAVCQEGRTLQPSELLGLYAYSKKVSIPYNRGGVRGQIDGTELLLSLPSSLP-------------------------------------------------DSLIGTRVDDVWFQ--------------LAKNASSALKD-------SGSSTVTSLSGGAISSRPFCYLTTVTAGNAIHCTCHSRARSADRNHPKAPKSEWEGASLRNSRVTCNVILPLVSAKCSKVPLMAVESALADHESIATNIMSSRPKS-MFWAVMHDVRFLLLRLSYGEALNVDCGGGSLSSNASLLFYQMFVAH 416          
BLAST of mRNA_E-fasciculatus_F_contig13596.2675.1 vs. uniprot
Match: I6QLF9_9ORYZ (E3_UbLigase_R4 domain-containing protein (Fragment) n=1 Tax=Oryza eichingeri TaxID=29689 RepID=I6QLF9_9ORYZ)

HSP 1 Score: 117 bits (293), Expect = 2.210e-26
Identity = 56/125 (44.80%), Postives = 78/125 (62.40%), Query Frame = 1
Query:  973 STVAAFNVIHVSCHHEAARADRAMRVPKSEWEGATLRNSRVACNSLLPLRSPTTPDERYQAGLDRHMANLGEVLQGQAFAPRLPLLVQDVRLLLSRLAHQESLSADCGGGAARSNIQLIPYQLQV 1347
            +TV+ FN+IH  CH EA RAD A++ PK EW+GATLRN+   CN + PLR P+ P  +Y   LD++   L  +  G+A   RL LL  D+ L+L+R A   S S DC GG   SN + +P+ +Q+
Sbjct:   43 TTVSHFNIIHYQCHQEAKRADAALKNPKKEWDGATLRNNETLCNCIFPLRGPSVPPGQYTRCLDQYWDQLNSL--GRADGSRLRLLTYDIVLMLARFATGASFSTDCKGGGKESNSRFLPFMIQM 165          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13596.2675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLX1_ECTSI1.380e-17087.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J981_9PHAE2.370e-12673.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9DHT1_9STRA1.030e-3636.91ZZ-type domain-containing protein n=1 Tax=Nannochl... [more]
I2CNY7_NANGC1.100e-3637.18Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
A0A835Z9Y3_9STRA1.420e-3641.85E3 ubiquitin-protein ligase UBR4-domain-containing... [more]
W7U2B9_9STRA1.870e-3637.18Zinc finger, ZZ-type n=1 Tax=Nannochloropsis gadit... [more]
A0A7S2G4M4_9STRA6.530e-3249.61Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2FLX3_9STRA5.910e-3151.16Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A6T7HYH0_9STRA3.120e-2728.94Hypothetical protein n=1 Tax=Attheya septentrional... [more]
I6QLF9_9ORYZ2.210e-2644.80E3_UbLigase_R4 domain-containing protein (Fragment... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13596contigE-fasciculatus_F_contig13596:50..3409 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score503.8
Seed ortholog evalue8.2e-140
Seed eggNOG ortholog2880.D8LLX1
KEGG koko:K10691
KEGG Pathwayko05165,ko05203,map05165,map05203
EggNOG free text desc.perineurial glial growth
EggNOG OGsKOG1776@1,KOG1776@2759
EC2.3.2.27
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionE3 ubiquitin ligase, UBR4
Ec32 orthologEc-14_002000.1
Exons5
Model size1365
Cds size1365
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13596.2675.1prot_E-fasciculatus_F_contig13596.2675.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13596 50..3409 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927856.059038-CDS-E-fasciculatus_F_contig13596:49..2891622927856.059038-CDS-E-fasciculatus_F_contig13596:49..289Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13596 50..289 +
1695995725.1708488-CDS-E-fasciculatus_F_contig13596:49..2891695995725.1708488-CDS-E-fasciculatus_F_contig13596:49..289Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13596 50..289 +
1622927856.0804038-CDS-E-fasciculatus_F_contig13596:639..9181622927856.0804038-CDS-E-fasciculatus_F_contig13596:639..918Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13596 640..918 +
1695995725.1869013-CDS-E-fasciculatus_F_contig13596:639..9181695995725.1869013-CDS-E-fasciculatus_F_contig13596:639..918Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13596 640..918 +
1622927856.0944068-CDS-E-fasciculatus_F_contig13596:1420..16181622927856.0944068-CDS-E-fasciculatus_F_contig13596:1420..1618Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13596 1421..1618 +
1695995725.205761-CDS-E-fasciculatus_F_contig13596:1420..16181695995725.205761-CDS-E-fasciculatus_F_contig13596:1420..1618Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13596 1421..1618 +
1622927856.1068523-CDS-E-fasciculatus_F_contig13596:2310..27811622927856.1068523-CDS-E-fasciculatus_F_contig13596:2310..2781Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13596 2311..2781 +
1695995725.2150702-CDS-E-fasciculatus_F_contig13596:2310..27811695995725.2150702-CDS-E-fasciculatus_F_contig13596:2310..2781Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13596 2311..2781 +
1622927856.1171792-CDS-E-fasciculatus_F_contig13596:3232..34091622927856.1171792-CDS-E-fasciculatus_F_contig13596:3232..3409Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13596 3233..3409 +
1695995725.225728-CDS-E-fasciculatus_F_contig13596:3232..34091695995725.225728-CDS-E-fasciculatus_F_contig13596:3232..3409Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13596 3233..3409 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13596.2675.1

>prot_E-fasciculatus_F_contig13596.2675.1 ID=prot_E-fasciculatus_F_contig13596.2675.1|Name=mRNA_E-fasciculatus_F_contig13596.2675.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=455bp
TSPHLKVGLLAETLLEAAAQDNALTGAEVARLREETRAAKRKLAQARRER
ALKAMGVRATGAGKSCAVSTAAAAGAEDGESAATGSDAAAPAAAAGDASS
SPASAAGDSPASSATAASTGGGGGGAAARAKAKAMAAAAARAVATPAWMS
EMMGLEEEAGLTCMVCHEGYQCKPRAVLGVYVYAKPVLGKDLHELEGDFL
LDPADLPAAPEAGGGGGGGGGGGGGGDVVFYGDESGGSEDDDGEGDGGID
AAAQGLDRLVGIVASRAMAQGGGNAGGGGGSRARAHADAVAALERCCRGE
GRSGGGGGGGGGGGGGGAGGAALVSTVAAFNVIHVSCHHEAARADRAMRV
PKSEWEGATLRNSRVACNSLLPLRSPTTPDERYQAGLDRHMANLGEVLQG
QAFAPRLPLLVQDVRLLLSRLAHQESLSADCGGGAARSNIQLIPYQLQVK
HGTL*
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mRNA from alignment at E-fasciculatus_F_contig13596:50..3409+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13596.2675.1 ID=mRNA_E-fasciculatus_F_contig13596.2675.1|Name=mRNA_E-fasciculatus_F_contig13596.2675.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3360bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13596:50..3409+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACCTCACCTCACCTAAAGGTTGGTCTTTTGGCGGAAACCCTGCTGGAGGC GGCGGCCCAAGACAACGCTCTCACCGGCGCCGAGGTCGCACGGCTGAGGG AAGAGACTCGCGCGGCCAAGCGCAAGCTGGCGCAGGCTCGGAGGGAGCGA GCGCTGAAGGCCATGGGCGTCCGCGCCACGGGCGCGGGGAAGTCTTGTGC GGTTTCGACGGCGGCAGCGGCGGGGGCCGAGGATGGGGAGGTGTGTTGGT CGTGCGTGGGGCGGTGGTTTTGGGAGTCCGATCTCGGTCCCGCCCCGGTG TGTAGTGTTGTGTTGAGTGATGCTGCTGGCTGGGTGGTGACCGTTTGGCG TTTTATGTCTCCATACGCCAGGACCGACGTTAATTGTTTTGTTCTGAGTC AGTCGTGTTGTTTCCCGAGGGTTACGTTTGGTAGATGATAACGAGTGTTG GCGACGAATGCAATACAGTGCAACAGAACAGCACCATCCGTCCTTGTTTC CAACGTTGCTGCTGTTGCTGCTGTTTTGAGCCCCGAACGAACGCGCTCAC TCCATCCAACTACCGGCGGTGTGCGCTCTTGAAAACGCAGTCTGCGGCGA CGGGGAGCGATGCCGCAGCCCCAGCGGCAGCGGCAGGAGACGCCAGCTCG TCGCCGGCGTCTGCTGCGGGAGATTCGCCGGCGTCGTCGGCCACGGCCGC TAGTACCGGCGGCGGCGGCGGCGGGGCGGCGGCGAGGGCGAAGGCGAAAG CAATGGCGGCTGCGGCGGCGCGAGCGGTGGCCACCCCGGCGTGGATGTCG GAGATGATGGGCCTTGAGGAGGAGGCCGGGTTGACCTGCATGGTGTGCCA CGAGGGATACCAGTGCAAGGTACGCCCGGGGGGGGGGCTTGGCGAACGAC TGTTCGTGGTTGTTTTGCTGTCTCTCTGGTTCGGACGGGTGTTTAAAAGT AAAGTGTCTCTCGGCGGAATTGCTTTGTTTGTTCAATGGTGGAAGTCATG GTCTGCGAAGGAAACACACGACGATACACTTCATTCATATGCTGCGCTCC ACGGTCCGACCTCTCCCCCCACGGCCGGCGAAGACGAGGACAGCAGTTGA CCTCGCCTTCCACCAGTCTGTTTTTGCGGCCCTCTCCTTCCGTGTTGGCC CTCTCGTAAGCGTCACAAATTACCCCTTCCCCTCCTCCCATGAGCCTGGG CCGGCGACCACCCGGCATCTCGCTCCGTTCCAGCATTGTAGGGATGCGAG GTCGATGGTCTAACGGCTAAGCCATGCGTTTTCATGAGTACCCCCCCTCC TCCTATTAATGCTTCTGATGCGCGTGCGTGCGTGCTTGTTTATTTGTTGT CTCCGTCTCTGTCTGTCGCAGCCGCGCGCCGTGCTGGGCGTCTACGTGTA CGCCAAGCCCGTCCTGGGCAAGGATCTCCACGAGCTGGAAGGCGACTTCC TTCTCGACCCCGCAGACCTGCCCGCCGCGCCCGAGGCCGGCGGTGGCGGT GGCGGTGGCGGCGGCGGTGGCGGGGGGGGAGATGTCGTGTTCTACGGCGA CGAGTCTGGAGGGTCGGAGGTGCGTGGGGGTGCCTCTATAATGTGGCATA TGTTGTGGGCGCCGGGGGTGTTTTTTTGGCCGTGCGCGCGGTTTATGTGC ACACTCGTCGTCCGCGCCGCTGCTTTCAGTTGGCCCGGTGTTGGTTTGGT TCTCTGCCACGCTCACGGAAAATGGTACAGGCTACAGTACGCTTGTTAAG AATGTTGTGGTAGGGAGGGAGAGAAGAGTCCTAGGGTACAGTTCCTCTGG TGGTGGAGCCTCGTGTCTTGTCTTGTGTCCGCCCTTGCGTTCGATTGGGT GTGTGTTGGCGCATGTTACGTCATCTGGATGCCGTAAATGCCTGCGTGCC GAGTTTCCCTCGGCCGGTTTCGTCGACTAGTAGGGGAGAAATGCCAAGCG ATGAATCATAATCCAAGGGCATCATTCCACCTCCTCTTTTTTTCACTGGT CCATCTTTTCACCCTCACCCTCACCCTCATGAGGCCCGCCTTTTAGAAAA CCACGCCACACCCGCGCGAGCCGTCTCGTCGTCGTCGTCGTCGTCGTCGT GGCCATGCACAACTTCGCCATCGTACGTGCTCCCTCCCACCAAGCATGTT ATGTACCAGGGTCACGACATCACAAACCGCGTACTCCTTTTTCCGGTGGG GTAAACAAACCCTGCGCCCCCCCCCCCCCCCTGCCCGCCCGCGTGCTACA ACACCCTCCAGGATGACGACGGGGAGGGCGACGGTGGCATCGACGCCGCC GCGCAAGGCTTGGACCGCCTCGTCGGCATAGTGGCGTCCCGGGCCATGGC GCAAGGCGGCGGCAACGCCGGCGGAGGCGGTGGAAGCCGAGCACGCGCGC ACGCGGACGCTGTCGCCGCCCTCGAGCGCTGCTGCCGGGGGGAAGGCAGG AGCGGCGGCGGCGGCGGCGGCGGTGGTGGCGGCGGTGGCGGCGGCGCCGG AGGGGCGGCGTTGGTGTCGACGGTGGCGGCGTTCAACGTGATCCACGTGT CCTGCCACCACGAGGCCGCGAGGGCGGACAGGGCCATGCGCGTCCCCAAG TCGGAGTGGGAGGGGGCGACGCTGAGGAACTCGAGGGTGGCCTGCAACAG CCTGCTGCCGCTGAGGTCGCCGACGACCCCGGATGAGCGGTACCAGGCCG GGCTTGACCGGCACATGGCGAACCTCGGCGAGGTGGGTTGGGCTGTGATA AGGGCGAAGCGGTTGTTGTGGGGGGGGCGAGAGGGATGGTGGATAAGGGT AGTTAGTTGTTCGGATACTGGGATTGAGTGAGGTGGGGGTGGGTTGCGGG GGAAGATAGTTATTGTAATTGTTCGATTACGGGGGATGAAATCTAGTTTT TGCTGTGGTGATGGTGTTTTCTAGATTCTCTATTCTCCGGTTCATGAACG ATTTTCTGGCGACGTTTTTCGTACGACCAACCCCGATCATAAACAGTCTT GCGTGTTCCGTGATGGTCGAGAGCGACTAAAAAGAAAAAAAAACGGCAGC TTTGCGGTATTGAGTCGATTCTCGACAGGGGATCGTTGCTCAGAATCACT CGCCCGTCACCACAACTCGCACCCAAACACAAGAGCGCCTCCTTCCATTG TTTTTGTTTGCCCGCCAACACGGCCGCGCCCAGGTGCTGCAGGGGCAGGC CTTCGCGCCCCGCCTCCCGCTTCTGGTCCAGGACGTGAGGCTGCTGCTGT CGAGGCTGGCTCACCAGGAAAGCCTCTCCGCCGACTGCGGGGGCGGGGCG GCTCGCAGCAACATTCAGCTCATTCCATACCAACTACAGGTGAAACACGG GACGTTGTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13596:50..3409+

>mRNA_E-fasciculatus_F_contig13596.2675.1 ID=mRNA_E-fasciculatus_F_contig13596.2675.1|Name=mRNA_E-fasciculatus_F_contig13596.2675.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2730bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13596:50..3409+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACCTCACCTCACCTAAAGGTTGGTCTTTTGGCGGAAACCCTGCTGGAGGC
GGCGGCCCAAGACAACGCTCTCACCGGCGCCGAGGTCGCACGGCTGAGGG
AAGAGACTCGCGCGGCCAAGCGCAAGCTGGCGCAGGCTCGGAGGGAGCGA
GCGCTGAAGGCCATGGGCGTCCGCGCCACGGGCGCGGGGAAGTCTTGTGC
GGTTTCGACGGCGGCAGCGGCGGGGGCCGAGGATGGGGAGACCTCACCTC
ACCTAAAGGTTGGTCTTTTGGCGGAAACCCTGCTGGAGGCGGCGGCCCAA
GACAACGCTCTCACCGGCGCCGAGGTCGCACGGCTGAGGGAAGAGACTCG
CGCGGCCAAGCGCAAGCTGGCGCAGGCTCGGAGGGAGCGAGCGCTGAAGG
CCATGGGCGTCCGCGCCACGGGCGCGGGGAAGTCTTGTGCGGTTTCGACG
GCGGCAGCGGCGGGGGCCGAGGATGGGGAGTCTGCGGCGACGGGGAGCGA
TGCCGCAGCCCCAGCGGCAGCGGCAGGAGACGCCAGCTCGTCGCCGGCGT
CTGCTGCGGGAGATTCGCCGGCGTCGTCGGCCACGGCCGCTAGTACCGGC
GGCGGCGGCGGCGGGGCGGCGGCGAGGGCGAAGGCGAAAGCAATGGCGGC
TGCGGCGGCGCGAGCGGTGGCCACCCCGGCGTGGATGTCGGAGATGATGG
GCCTTGAGGAGGAGGCCGGGTTGACCTGCATGGTGTGCCACGAGGGATAC
CAGTGCAAGTCTGCGGCGACGGGGAGCGATGCCGCAGCCCCAGCGGCAGC
GGCAGGAGACGCCAGCTCGTCGCCGGCGTCTGCTGCGGGAGATTCGCCGG
CGTCGTCGGCCACGGCCGCTAGTACCGGCGGCGGCGGCGGCGGGGCGGCG
GCGAGGGCGAAGGCGAAAGCAATGGCGGCTGCGGCGGCGCGAGCGGTGGC
CACCCCGGCGTGGATGTCGGAGATGATGGGCCTTGAGGAGGAGGCCGGGT
TGACCTGCATGGTGTGCCACGAGGGATACCAGTGCAAGCCGCGCGCCGTG
CTGGGCGTCTACGTGTACGCCAAGCCCGTCCTGGGCAAGGATCTCCACGA
GCTGGAAGGCGACTTCCTTCTCGACCCCGCAGACCTGCCCGCCGCGCCCG
AGGCCGGCGGTGGCGGTGGCGGTGGCGGCGGCGGTGGCGGGGGGGGAGAT
GTCGTGTTCTACGGCGACGAGTCTGGAGGGTCGGAGCCGCGCGCCGTGCT
GGGCGTCTACGTGTACGCCAAGCCCGTCCTGGGCAAGGATCTCCACGAGC
TGGAAGGCGACTTCCTTCTCGACCCCGCAGACCTGCCCGCCGCGCCCGAG
GCCGGCGGTGGCGGTGGCGGTGGCGGCGGCGGTGGCGGGGGGGGAGATGT
CGTGTTCTACGGCGACGAGTCTGGAGGGTCGGAGGATGACGACGGGGAGG
GCGACGGTGGCATCGACGCCGCCGCGCAAGGCTTGGACCGCCTCGTCGGC
ATAGTGGCGTCCCGGGCCATGGCGCAAGGCGGCGGCAACGCCGGCGGAGG
CGGTGGAAGCCGAGCACGCGCGCACGCGGACGCTGTCGCCGCCCTCGAGC
GCTGCTGCCGGGGGGAAGGCAGGAGCGGCGGCGGCGGCGGCGGCGGTGGT
GGCGGCGGTGGCGGCGGCGCCGGAGGGGCGGCGTTGGTGTCGACGGTGGC
GGCGTTCAACGTGATCCACGTGTCCTGCCACCACGAGGCCGCGAGGGCGG
ACAGGGCCATGCGCGTCCCCAAGTCGGAGTGGGAGGGGGCGACGCTGAGG
AACTCGAGGGTGGCCTGCAACAGCCTGCTGCCGCTGAGGTCGCCGACGAC
CCCGGATGAGCGGTACCAGGCCGGGCTTGACCGGCACATGGCGAACCTCG
GCGAGGATGACGACGGGGAGGGCGACGGTGGCATCGACGCCGCCGCGCAA
GGCTTGGACCGCCTCGTCGGCATAGTGGCGTCCCGGGCCATGGCGCAAGG
CGGCGGCAACGCCGGCGGAGGCGGTGGAAGCCGAGCACGCGCGCACGCGG
ACGCTGTCGCCGCCCTCGAGCGCTGCTGCCGGGGGGAAGGCAGGAGCGGC
GGCGGCGGCGGCGGCGGTGGTGGCGGCGGTGGCGGCGGCGCCGGAGGGGC
GGCGTTGGTGTCGACGGTGGCGGCGTTCAACGTGATCCACGTGTCCTGCC
ACCACGAGGCCGCGAGGGCGGACAGGGCCATGCGCGTCCCCAAGTCGGAG
TGGGAGGGGGCGACGCTGAGGAACTCGAGGGTGGCCTGCAACAGCCTGCT
GCCGCTGAGGTCGCCGACGACCCCGGATGAGCGGTACCAGGCCGGGCTTG
ACCGGCACATGGCGAACCTCGGCGAGGTGCTGCAGGGGCAGGCCTTCGCG
CCCCGCCTCCCGCTTCTGGTCCAGGACGTGAGGCTGCTGCTGTCGAGGCT
GGCTCACCAGGAAAGCCTCTCCGCCGACTGCGGGGGCGGGGCGGCTCGCA
GCAACATTCAGCTCATTCCATACCAACTACAGGTGAAACACGGGACGTTG
TAGGTGCTGCAGGGGCAGGCCTTCGCGCCCCGCCTCCCGCTTCTGGTCCA
GGACGTGAGGCTGCTGCTGTCGAGGCTGGCTCACCAGGAAAGCCTCTCCG
CCGACTGCGGGGGCGGGGCGGCTCGCAGCAACATTCAGCTCATTCCATAC
CAACTACAGGTGAAACACGGGACGTTGTAG
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