prot_E-fasciculatus_F_contig13588.2670.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13588.2670.1
Unique Nameprot_E-fasciculatus_F_contig13588.2670.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length132
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13588.2670.1 vs. uniprot
Match: D7G485_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G485_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 9.510e-46
Identity = 95/132 (71.97%), Postives = 98/132 (74.24%), Query Frame = 0 
Query:    1 LAALADALAGALGSVVAVAVFYPIDIAKTRAQASSRITTRNRHDHDESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAWFRSRTLAALLSIVRTEGGLTRLYEGIEAKVLQALLGSFVYFYAYAFIK 132
            LAAL+DALAGALGSVVAVAVFYPIDIAKTRAQASS +TTR+RHDHDESS                                R WFRSRTLAALLSIVRTEGGLTRLYEGIEAKVLQALLGSFVYFYAYAFIK
Sbjct:   40 LAALSDALAGALGSVVAVAVFYPIDIAKTRAQASSPVTTRSRHDHDESSGGHGSSTEESSTAPEGGRVGSSNTALAGDGRRRVWFRSRTLAALLSIVRTEGGLTRLYEGIEAKVLQALLGSFVYFYAYAFIK 171
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BLAST of mRNA_E-fasciculatus_F_contig13588.2670.1 vs. uniprot
Match: A0A835YZE1_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZE1_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 3.110e-12
Identity = 64/132 (48.48%), Postives = 78/132 (59.09%), Query Frame = 0 
Query:    1 LAALADALAGALGSVVAVAVFYPIDIAKTRAQASSRITTRNRHDHDESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAWFRSRTLAALLSIVRTEGGLTRLYEGIEAKVLQALLGSFVYFYAYAFIK 132
            +AALADALAG++GS +A  +F+P+D AKTR QAS          H  SS      XXXXXXXXXXX               R    SRTLAALL +   EG  + L+ G++AKVL AL   F+YFYAYAF+K
Sbjct:    1 MAALADALAGSIGSCIAAILFFPLDTAKTRVQAS----------HSGSSDTDGSGXXXXXXXXXXXSAVERSQRSDAAV--RRVLGSRTLAALLDVYTREGP-SALFRGLDAKVLSALSSGFIYFYAYAFLK 119
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13588.2670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G485_ECTSI9.510e-4671.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YZE1_9STRA3.110e-1248.48Mitochondrial carrier domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 4..132
e-value: 2.4E-12
score: 46.6
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 1..132
score: 9.169
NoneNo IPR availablePANTHERPTHR45939FAMILY NOT NAMEDcoord: 1..132
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..132
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 114..131
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 4..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13588contigE-fasciculatus_F_contig13588:258..653 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13588.2670.1mRNA_E-fasciculatus_F_contig13588.2670.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13588 258..653 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13588.2670.1 ID=prot_E-fasciculatus_F_contig13588.2670.1|Name=mRNA_E-fasciculatus_F_contig13588.2670.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=132bp
LAALADALAGALGSVVAVAVFYPIDIAKTRAQASSRITTRNRHDHDESSG
GHDSSTEEASTASEGGKVSSGSVARGGGGRRRAWFRSRTLAALLSIVRTE
GGLTRLYEGIEAKVLQALLGSFVYFYAYAFIK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom_sf
IPR018108Mitochondrial_sb/sol_carrier