mRNA_E-fasciculatus_F_contig13580.2665.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13580.2665.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 254 bits (650), Expect = 1.220e-79 Identity = 134/167 (80.24%), Postives = 141/167 (84.43%), Query Frame = 1
Query: 10 GRSECLDAFIVALNQTYDGVEKRWYASTLELQLVSLEFCGACRRVPTLHVRVHRQTPRSLWSPRNSHATASKRRREVCVSSRVPAVQASGLTWTLPMKVLQQSSAMELRSGSKYRRVRGNSSAASLGSMFWLQR-LTLLEFDSDMPVNTASWPASLQQLSFGHDFNQ 507
GRSECL AFIVALNQT +G EKRWYASTLELQLVSLEFCGACRRVPTLHVRV RQTPRSLWSP SHAT KR RE CVS+RVPAVQASGLTW L M+VL Q+SA+ELRS SKYRRV GNSS ASLGSMFWLQ L L FDSDMP +TASWPASL QL FG F+Q
Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPASTASWPASLPQLLFGDRFDQ 179
BLAST of mRNA_E-fasciculatus_F_contig13580.2665.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 226 bits (575), Expect = 2.710e-65 Identity = 118/169 (69.82%), Postives = 128/169 (75.74%), Query Frame = 1
Query: 1 TISGRSECLDAFIVALNQTYDGVEKRWYASTLELQLVSLEFCGACRRVPTLHVRVHRQTPRSLWSPRNSHATASKRRREVCVSSRVPAVQASGLTWTLPMKVLQQSSAMELRSGSKYRRVRGNSSAASLGSMFWLQRLTLLEFDSDMPVNTASWPASLQQLSFGHDFNQ 507
T G S+CLDAF+VALNQ DG EKRWY STLELQLVSLE CGACRRV TLHVRV QTP SLW P +H T + R +VC+SSRVP VQA GLTW LPM VLQQ SA E+RSGS RR +SSAASL S W QRL + F+SDM VNTASWPASLQQLSFG FNQ
Sbjct: 2 TTKGNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTVNTASWPASLQQLSFGCGFNQ 170
BLAST of mRNA_E-fasciculatus_F_contig13580.2665.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 205 bits (521), Expect = 1.370e-58 Identity = 106/166 (63.86%), Postives = 119/166 (71.69%), Query Frame = 1
Query: 10 GRSECLDAFIVALNQTYDGVEKRWYASTLELQLVSLEFCGACRRVPTLHVRVHRQTPRSLWSPRNSHATASKRRREVCVSSRVPAVQASGLTWTLPMKVLQQSSAMELRSGSKYRRVRGNSSAASLGSMFWLQRLTLLEFDSDMPVNTASWPASLQQLSFGHDFNQ 507
GRSECLDAFIVAL Q DG KRWY STLELQLVSLEFCGACR + V++HRQTP SLWSPR SH T KR RE C+ SRVPAVQA+G W LPM++L SA EL S+ R+ G SSA S G M W Q+LT L F S+ VN+ SWPA LQ+LSFG FNQ
Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYSERSVNSVSWPACLQELSFGDFFNQ 190
BLAST of mRNA_E-fasciculatus_F_contig13580.2665.1 vs. uniprot
Match: A0A6H5K2L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE) HSP 1 Score: 174 bits (442), Expect = 1.580e-49 Identity = 101/167 (60.48%), Postives = 115/167 (68.86%), Query Frame = 1
Query: 7 SGRSECLDAFIVALNQTYDGVEKRWYASTLELQLVSLEFCGACRRVPTLHVRVHRQTPRSLWSPRNSHATASKRRREVCVSSRVPAVQASGLTWTLPMKVLQQSSAMELRSGSKYRRVRGNSSAASLGSMFWLQRLTLLEFDSDMPVNTASWPASLQQLSFGHDFNQ 507
+GR EC+DAFIVALN+T DG E+RWYASTLELQ VSLEFC ACRRVPT SH+T++ R V SR P V+A LTW L M VL QS AMEL+ GSKYRR G+SSAA+L SM WLQRL L + D PV TASWPASLQQLSFG+ FN+
Sbjct: 14 NGRGECVDAFIVALNRTCDGGEQRWYASTLELQPVSLEFCVACRRVPT------------------SHSTSTVGRL-VSGVSRAPVVRAYSLTWALSMDVLLQSCAMELQRGSKYRRSGGHSSAANLASMLWLQRLKRLVLELDTPVITASWPASLQQLSFGYKFNK 161
BLAST of mRNA_E-fasciculatus_F_contig13580.2665.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 140 bits (354), Expect = 3.850e-37 Identity = 80/151 (52.98%), Postives = 91/151 (60.26%), Query Frame = 1
Query: 10 GRSECLDAFIVALNQTYDGVEKRWYASTLELQLVSLEFCGACRRVPTLHVRVHRQTPRSLWSPRNSHATASKRRREVCVSSRVPAVQASGLTWTLPMKVLQQSSAMELRSGSKYRRVRGNSSAASLGSMFWLQRLTLLEFDSDMPVNTASW 462
G LD IVALNQ DG EKRWY STLELQLVSLE CGACR LHV V TP +LWS R S T S+R EVC S+RVPAVQA TW LPM L Q +A E + ++ R G+S AAS+ S+ W + L L F MP W
Sbjct: 85 GGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRLVFSRRMPGKAVWW 235
BLAST of mRNA_E-fasciculatus_F_contig13580.2665.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 128 bits (322), Expect = 9.160e-34 Identity = 62/76 (81.58%), Postives = 67/76 (88.16%), Query Frame = 1
Query: 13 RSECLDAFIVALNQTYDGVEKRWYASTLELQLVSLEFCGACRRVPTLHVRVHRQTPRSLWSPRNSHATASKRRREV 240
RS+CLDAF+VALNQT DG EKRWYASTLELQLVSLEFCGACR VPTLHVRV R+TPRSLWSPR + TA KR R+V
Sbjct: 38 RSKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTTPITAHKRSRKV 113
BLAST of mRNA_E-fasciculatus_F_contig13580.2665.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 135 bits (341), Expect = 1.960e-33 Identity = 78/172 (45.35%), Postives = 105/172 (61.05%), Query Frame = 1
Query: 1 TISGRSECLDAFIVALNQTYDGVEKRWYASTLELQLVSLEFCGACRRVPTLHVRVHRQTPRSLWSPRNSHATASKRRREVCVSSRVPAVQASGLTWTLPMKVLQQSSAMELRSGSKYRRVRGNSSAASLGSMFWLQRLTLLEFDSDM---PVNTASWPASLQQLSFGHDFNQ 507
T + CLDAF+VAL+Q Y+G EKRWY STL+LQL SLEFCGACR P LHV V +TP +LWS ++ TA S+RVPAVQA GLTW P + S++ EL + + +++ + A+L S+ W Q L L D + P+ SWP+SL+ L+F F+Q
Sbjct: 2 TSEAQRRCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSLGQANPTAG-------TSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVMDCTVFIIPLEMMSWPSSLKSLTFAGIFDQ 166
BLAST of mRNA_E-fasciculatus_F_contig13580.2665.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 124 bits (312), Expect = 7.300e-32 Identity = 72/146 (49.32%), Postives = 89/146 (60.96%), Query Frame = 1
Query: 10 GRSECLDAFIVALNQTYDGVEKRWYASTLELQLVSLEFCGACRRVPTLHVRVHRQTPRSLWSPRNSHATASKRRREVCVSSRVPAVQASGLTWTLPMKVLQQSSAMELRSGSKYRRVRGNSSAASLGSMFWLQRLTLLEFDSDMPV 447
G + DAF +AL+Q +G EKRWY ST ELQL SL+ C ACR PTLHVRV TP SLWSP A + + +V V SRVP V+A LTW M+ L Q +A+EL S S+ + G AASLGS+ W LT L D+D +
Sbjct: 5 GYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTDFHI 150
BLAST of mRNA_E-fasciculatus_F_contig13580.2665.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 131 bits (329), Expect = 5.800e-31 Identity = 75/153 (49.02%), Postives = 100/153 (65.36%), Query Frame = 1
Query: 4 ISGRSECLDAFIVALNQTYDGVEKRWYASTLELQLVSLEFCGACRRVPTLHVRVHRQTPRSLWSPRNSHATASKRRREVCVSSRVPAVQASGLTWTLPMKVLQQSSAMELRSGSKYRRVRGNSSAASLGS-MFWLQRLT--LLEFDSDMPVNT 453
I R+ CLDAF++AL+Q +G EKRWYASTLELQL SL+ C ACR LHV V QTPRSLWS R + + R + +SSRVP V+A LTW L M+ L + +A+EL + S+ + G+S +SLGS + W + LT +L DSD+ + T
Sbjct: 5 IEWRTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDIAMGT 157
BLAST of mRNA_E-fasciculatus_F_contig13580.2665.1 vs. uniprot
Match: A0A6H5L3M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M5_9PHAE) HSP 1 Score: 127 bits (319), Expect = 7.300e-30 Identity = 77/163 (47.24%), Postives = 95/163 (58.28%), Query Frame = 1
Query: 22 CLDAFIVALN-QTYDGVEKRWYASTLELQLVSLEFCGACRRVPTLHVRVHRQTPRSLWSPRNSHATASKRRREVCVSSRVPAVQASGLTWTLPMKVLQQSSAMELRSGSKYRRVRGNSSAASLGSMFWLQRLTLLEFDSDMPVNTASWPASLQQLSFGHDFNQ 507
CLDAF+ LN Q+ +KRWY S ELQLVSL+FCG CR L VRV P SLWSP S + A +RVPAV+A G TW++P+ L + + + ++ R RG+ A L S+ W Q L LEFD D V ASWPASLQ L+FG FNQ
Sbjct: 103 CLDAFVAVLNHQSCVEGKKRWYTSIRELQLVSLKFCGVCRSTSILRVRVEHNAPPSLWSPTKSFSYALPD-----AWNRVPAVRAYGWTWSIPVDTLLKVCDLRYWAKAELSR-RGSFPEAKLASVVWPQGLKQLEFDLDTAVEKASWPASLQSLTFGCSFNQ 259 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13580.2665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13580.2665.1 >prot_E-fasciculatus_F_contig13580.2665.1 ID=prot_E-fasciculatus_F_contig13580.2665.1|Name=mRNA_E-fasciculatus_F_contig13580.2665.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=278bp TISGRSECLDAFIVALNQTYDGVEKRWYASTLELQLVSLEFCGACRRVPTback to top mRNA from alignment at E-fasciculatus_F_contig13580:2..835- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13580.2665.1 ID=mRNA_E-fasciculatus_F_contig13580.2665.1|Name=mRNA_E-fasciculatus_F_contig13580.2665.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=834bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13580:2..835- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13580:2..835- >mRNA_E-fasciculatus_F_contig13580.2665.1 ID=mRNA_E-fasciculatus_F_contig13580.2665.1|Name=mRNA_E-fasciculatus_F_contig13580.2665.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1668bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13580:2..835- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |