mRNA_E-fasciculatus_F_contig1358.2663.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1358.2663.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 114 bits (285), Expect = 7.160e-26 Identity = 76/147 (51.70%), Postives = 85/147 (57.82%), Query Frame = 2
Query: 2 GNSRCLDAFAAALNQACEGGEKRWYASTLELQLVSLGFCRACRSIPTWHVNVDLGTPYSLRSSGTPHGEQRSLRSKSWWKRPVPSRVPAVRALSLTLLLPIDALPQ-TAIEQWKWVEFVLLRQSYTTSDFRLGSVVLPPKLKRLVLD 439
G +R DAFA AL+QACEGGEKRWY ST ELQL SL CRACRS PT HV V GTP SL S T + SK V SRVP VRAL LT ++ L Q AIE W E + + + LGSVV P L +LVLD
Sbjct: 5 GYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVR----VVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAAS--LGSVVWPLGLTQLVLD 145
BLAST of mRNA_E-fasciculatus_F_contig1358.2663.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 123 bits (308), Expect = 1.140e-25 Identity = 80/145 (55.17%), Postives = 92/145 (63.45%), Query Frame = 2
Query: 8 SRCLDAFAAALNQACEGGEKRWYASTLELQLVSLGFCRACRSIPTWHVNVDLGTPYSLRSSGTPHGEQRSLRSKSWWKRPVPSRVPAVRALSLTLLLPIDAL-PQTAIEQWKWVEFVLLRQSYTTSDFRLGS-VVLPPKLKRLVL 436
+RCLDAF AL+QACEGGEKRWYASTLELQL SL CRACR+ HV+VD TP SL SS T Q ++SW + SRVP VRAL LT L ++AL + AIE W W E + L S S LGS VV P L +LVL
Sbjct: 9 TRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRT---AQTRPNTRSW-NLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSS--LGSEVVWPRGLTQLVL 147
BLAST of mRNA_E-fasciculatus_F_contig1358.2663.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 120 bits (302), Expect = 9.480e-25 Identity = 79/193 (40.93%), Postives = 96/193 (49.74%), Query Frame = 2
Query: 2 GNSRCLDAFAAALNQACEGGEKRWYASTLELQLVSLGFCRACRSIPTWHVNVDLGTPYSLRSSGTPHGEQRSLRSKSWWKRPVPSRVPAVRALSLTLLLPIDALPQTAIEQWKWVEFVLLRQSYTTSDFRLGSVVLPPKLKRLVLDMWWAGSAGAGSRFGRSIEFGHDFNRVLWPSSIQELQFGARFNYPITG 580
GNS+CLDAF ALNQAC+G EKRWY STLELQLVSL C ACR + T HV V TP SL H + K + SRVP V+A LT LP+ L Q + + + R + +S L S V P +LKR+V E N WP+S+Q+L FG FN I G
Sbjct: 5 GNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVC----ISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCR-RANTHSSAASLESAVWPQRLKRMVF------------------ESDMTVNTASWPASLQQLSFGCGFNQAIVG 174
BLAST of mRNA_E-fasciculatus_F_contig1358.2663.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 117 bits (292), Expect = 1.370e-24 Identity = 82/190 (43.16%), Postives = 100/190 (52.63%), Query Frame = 2
Query: 2 GNSRCLDAFAAALNQACEGGEKRWYASTLELQLVSLGFCRACRSIPTWHVNVDLGTPYSLRSSGTPHGEQRSLRSKSWWKRPVPSRVPAVRALSLTLLLPIDALPQT-AIEQWKWVEFVLLRQSYTTSDFRLGSVV-LPPKLKRLVLDMWWAGSAGAGSRFGRSIEFGHDFNRVLWPSSIQELQFGARFN 565
G S CL AF ALNQ C G EKRWYASTLELQLVSL FC ACR +PT HV VD TP SL S H + ++ V +RVPAV+A LT L ++ L QT A+E ++ R S +S LGS+ L LKRLV D S + WP+S+ +L FG RF+
Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREAC----VSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKY--RRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPASTAS------------------WPASLPQLLFGDRFD 178
BLAST of mRNA_E-fasciculatus_F_contig1358.2663.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 110 bits (276), Expect = 2.910e-22 Identity = 75/186 (40.32%), Postives = 97/186 (52.15%), Query Frame = 2
Query: 11 RCLDAFAAALNQACEGGEKRWYASTLELQLVSLGFCRACRSIPTWHVNVDLGTPYSLRSSGTPHGEQRSLRSKSWWKRPVPSRVPAVRALSLTLLLPIDA-LPQTAIEQWKWVEFVLLRQSYTTSDFRLGSVVLPPKLKRLVLDMWWAGSAGAGSRFGRSIEFGHDFNRVLWPSSIQELQFGARFN 565
RCLDAF AL+Q EGGEKRWY STL+LQL SL FC ACRS P HV VD TP +L S G + + +RVPAV+A+ LT P ++ L + E W +E + L+ S T++ L SVV P L+RLV+D F + WPSS++ L F F+
Sbjct: 8 RCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSLGQANPTAGTS-----------TRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTAN--LDSVVWPQGLQRLVMDC---------------TVFIIPLEMMSWPSSLKSLTFAGIFD 165
BLAST of mRNA_E-fasciculatus_F_contig1358.2663.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 108 bits (269), Expect = 6.250e-21 Identity = 83/198 (41.92%), Postives = 105/198 (53.03%), Query Frame = 2
Query: 2 GNSRCLDAFAAALNQACEGGEKRWYASTLELQLVSLGFCRACRSIPTWHVNVDLGTPYSLRSSGTPHGEQRSLRSKSWWKRPVPSRVPAVRALSLTLLLPIDAL-PQTAIEQWKWVEFVLLRQ----SYTTSDFRLGSVVLPPKLKRLVLDMWWAGSAGAGSRFGRSIEFGHDFNRVLWPSSIQELQFGARFNYPITG 580
G S CLDAF AL QA +G KRWY STLELQLVSL FC ACRS ++ V + TP+SL S HG + ++ +PSRVPAV+A LP++ L P++A E + E RQ S TS R+G KL RL M+++ RS+ N V WP+ +QEL FG FN PI G
Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREAC----IPSRVPAVQANGWMWALPMEILLPRSATELHQVSEN---RQPTGPSSATSPGRMGWF---QKLTRL---MFYS---------ERSV------NSVSWPACLQELSFGDFFNQPIIG 194
BLAST of mRNA_E-fasciculatus_F_contig1358.2663.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 101 bits (251), Expect = 2.030e-20 Identity = 69/157 (43.95%), Postives = 86/157 (54.78%), Query Frame = 2
Query: 2 GNSRCLDAFAAALNQACEGGEKRWYASTLELQLVSLGFCRACRSIPTWHVNVDLGTPYSLRSSGTPHGEQRSLRSKSWWKRPVPSRVPAVRALSLTLLLPIDALPQTAIEQWKWVEFVLLRQSYTTSDFRLGSVVLPPKLKRLVLD-------MWWA 451
G LD ALNQAC+G EKRWY STLELQLVSL C ACRS HV V TP +L SS T R+ S+ + +RVPAV+AL T LP+D LPQ A + + V L+ ++ + + SVV P LKRLV +WW+
Sbjct: 85 GGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRT----SRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAA-SVESVVWPESLKRLVFSRRMPGKAVWWS 236
BLAST of mRNA_E-fasciculatus_F_contig1358.2663.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 4.100e-19 Identity = 45/63 (71.43%), Postives = 48/63 (76.19%), Query Frame = 2
Query: 8 SRCLDAFAAALNQACEGGEKRWYASTLELQLVSLGFCRACRSIPTWHVNVDLGTPYSLRSSGT 196
S+CLDAF ALNQ C+G EKRWYASTLELQLVSL FC ACR +PT HV VD TP SL S T
Sbjct: 39 SKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRT 101
BLAST of mRNA_E-fasciculatus_F_contig1358.2663.1 vs. uniprot
Match: A0A6H5K2L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 4.350e-19 Identity = 71/189 (37.57%), Postives = 91/189 (48.15%), Query Frame = 2
Query: 2 GNSRCLDAFAAALNQACEGGEKRWYASTLELQLVSLGFCRACRSIPTWHVNVDLGTPYSLRSSGTPHGEQRSLRSKSWWKRPVPSRVPAVRALSLTLLLPIDALPQT-AIEQWKWVEFVLLRQSYTTSDFRLGSVVLPPKLKRLVLDMWWAGSAGAGSRFGRSIEFGHDFNRVLWPSSIQELQFGARFN 565
G C+DAF ALN+ C+GGE+RWYASTLELQ VSL FC ACR +PT H +G S G SR P VRA SLT L +D L Q+ A+E + ++ R +S L S++ +LKRLVL E WP+S+Q+L FG +FN
Sbjct: 15 GRGECVDAFIVALNRTCDGGEQRWYASTLELQPVSLEFCVACRRVPTSHSTSTVGRLVS----GV-------------------SRAPVVRAYSLTWALSMDVLLQSCAMELQRGSKY--RRSGGHSSAANLASMLWLQRLKRLVL------------------ELDTPVITASWPASLQQLSFGYKFN 160
BLAST of mRNA_E-fasciculatus_F_contig1358.2663.1 vs. uniprot
Match: D7G3G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G0_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 3.180e-17 Identity = 40/57 (70.18%), Postives = 42/57 (73.68%), Query Frame = 2
Query: 2 GNSRCLDAFAAALNQACEGGEKRWYASTLELQLVSLGFCRACRSIPTWHVNVDLGTP 172
G +CLDAF ALNQ C+G E RWYASTLELQLVSL FC ACR PT HV VD TP
Sbjct: 5 GRRKCLDAFIVALNQTCDGRENRWYASTLELQLVSLKFCGACRRFPTLHVRVDRQTP 61 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1358.2663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1358.2663.1 >prot_E-fasciculatus_F_contig1358.2663.1 ID=prot_E-fasciculatus_F_contig1358.2663.1|Name=mRNA_E-fasciculatus_F_contig1358.2663.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=469bp MWWAGSAGAGSRFGRSIEFGHDFNRVLWPSSIQELQFGARFNYPITGTVWback to top mRNA from alignment at E-fasciculatus_F_contig1358:9111..11143+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1358.2663.1 ID=mRNA_E-fasciculatus_F_contig1358.2663.1|Name=mRNA_E-fasciculatus_F_contig1358.2663.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2033bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1358:9111..11143+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1358:9111..11143+ >mRNA_E-fasciculatus_F_contig1358.2663.1 ID=mRNA_E-fasciculatus_F_contig1358.2663.1|Name=mRNA_E-fasciculatus_F_contig1358.2663.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2814bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1358:9111..11143+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |