mRNA_E-fasciculatus_F_contig1358.2664.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1358.2664.1 vs. uniprot
Match: D7G265_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G265_ECTSI) HSP 1 Score: 374 bits (961), Expect = 7.130e-127 Identity = 188/203 (92.61%), Postives = 198/203 (97.54%), Query Frame = 2
Query: 2 SKVMGVTVIGGASGGITSLLVNKMQCGYWDTGSALNGILTGLVSITAGSGAYEPEAAFVVGVLGGVIYFFASNLLLRHHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFGYAVAYSEDRSDKCAGILYGGSGNSLAANIVFLIAVVAWVGLLTLVLFVVTKLTIGIRVSKQQELAGMDDSKHGGQTFPELLPRRRTMDRPGSSF 610
+KVMGVTVIGGASGGITSLLVNK+QCGYWDTGSALNGILTGLVSITAGSG YEPE AFVVGVLGGV+YFFASNLLLR+HLDDVVNAAPVHLFGGMWGLVSAGLFSSKF YA+AYSEDRSD CAGILYGGSG +LAANIVFL+AV+AWVGLLTL+LFVVTKLTIGIRVSKQQELAGMDDSKHGGQTFPELLPRRRT+DRPGSSF
Sbjct: 257 AKVMGVTVIGGASGGITSLLVNKLQCGYWDTGSALNGILTGLVSITAGSGTYEPEGAFVVGVLGGVLYFFASNLLLRNHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFAYAMAYSEDRSDTCAGILYGGSGGTLAANIVFLMAVLAWVGLLTLLLFVVTKLTIGIRVSKQQELAGMDDSKHGGQTFPELLPRRRTVDRPGSSF 459
BLAST of mRNA_E-fasciculatus_F_contig1358.2664.1 vs. uniprot
Match: D7FGY6_ECTSI (Ammonium_transp domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGY6_ECTSI) HSP 1 Score: 306 bits (785), Expect = 5.400e-104 Identity = 153/196 (78.06%), Postives = 172/196 (87.76%), Query Frame = 2
Query: 11 MGVTVIGGASGGITSLLVNKMQCGYWDTGSALNGILTGLVSITAGSGAYEPEAAFVVGVLGGVIYFFASNLLLRHHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFGYAVAYSEDRSDKCAGILYGGSGNSLAANIVFLIAVVAWVGLLTLVLFVVTKLTIGIRVSKQQELAGMDDSKHGGQTFPELLPRRRTMDRP 598
M VTVIGGASGGI+SLLVN+ CGYWDTGSALNGIL GLVS+TAG+ YEPE AFVVG++GGV+Y FAS LLL+ HLDDVVNA PVHLFGGMWGLV+AG F+SKFGYA AYSEDRS CAGILYGG+G+SL A+IVFL+AVVAWVG LTL+LFVVTKLTIGIR+SK+QE+AGMD SKHGGQT+PEL P R D P
Sbjct: 1 MTVTVIGGASGGISSLLVNQRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGVLYLFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGTCAGILYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGMDVSKHGGQTYPELQPGLRGPDTP 196
BLAST of mRNA_E-fasciculatus_F_contig1358.2664.1 vs. uniprot
Match: A0A6H5J7X8_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7X8_9PHAE) HSP 1 Score: 308 bits (789), Expect = 6.900e-101 Identity = 151/199 (75.88%), Postives = 174/199 (87.44%), Query Frame = 2
Query: 2 SKVMGVTVIGGASGGITSLLVNKMQCGYWDTGSALNGILTGLVSITAGSGAYEPEAAFVVGVLGGVIYFFASNLLLRHHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFGYAVAYSEDRSDKCAGILYGGSGNSLAANIVFLIAVVAWVGLLTLVLFVVTKLTIGIRVSKQQELAGMDDSKHGGQTFPELLPRRRTMDRP 598
++VM VTVI GASGGI+SL+ NK CGYWDTGSALNGIL GLVS+TAG+ YEPE AFVVG++GG++Y FAS LLL+ HLDDVVNA PVHLFGGMWGLV+AG F+SKFGYA AYSEDRS +CAG+LYGGSG+SLAANI+FL+AVV WVGLLTL+LFVVTKLTIGIRVSK+QE+AGMD SKHGGQT+PE R +D P
Sbjct: 257 ARVMAVTVISGASGGISSLVANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGMLYVFASALLLKLHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGRCAGVLYGGSGSSLAANIIFLMAVVVWVGLLTLLLFVVTKLTIGIRVSKEQEMAGMDGSKHGGQTYPEFQSGLRCLDTP 455
BLAST of mRNA_E-fasciculatus_F_contig1358.2664.1 vs. uniprot
Match: D7G242_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G242_ECTSI) HSP 1 Score: 210 bits (535), Expect = 1.060e-62 Identity = 99/196 (50.51%), Postives = 144/196 (73.47%), Query Frame = 2
Query: 2 SKVMGVTVIGGASGGITSLLVNKMQCGYWDTGSALNGILTGLVSITAGSGAYEPEAAFVVGVLGGVIYFFASNLLLRHHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFGYAVAYSEDRSDKCAGILYGGSGNSLAANIVFLIAVVAWVGLLTLVLFVVTKLTIGIRVSKQQELAGMDDSKHGGQTFPELLPRRRTM 589
+KVM +T I A G IT+ ++ K++ GYWD+G+A NG+L GLV ITAG EPEAA V+G++ +Y ++S L+L+ +DDVV+A P+H F G+WG+++ LF++K YA YS +R+DKCAG YGG G++LA +VFL+A++AW + + LF+ K TIGIRVS++ E GMDDSKHGGQT+PE++ R+T+
Sbjct: 274 AKVMVITTISAAFGAITNSVIGKVRLGYWDSGAANNGLLAGLVGITAGCSTCEPEAAMVIGIVAAFVYTYSSKLMLKLQIDDVVDAVPIHFFCGVWGVIAVSLFATKDNYANVYSAERADKCAGAFYGGDGSTLAVGLVFLLALIAWTVVTCMALFLGIKYTIGIRVSQEVEQIGMDDSKHGGQTYPEMV--RKTL 467
BLAST of mRNA_E-fasciculatus_F_contig1358.2664.1 vs. uniprot
Match: D7G243_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G243_ECTSI) HSP 1 Score: 207 bits (526), Expect = 2.260e-61 Identity = 95/190 (50.00%), Postives = 133/190 (70.00%), Query Frame = 2
Query: 2 SKVMGVTVIGGASGGITSLLVNKMQCGYWDTGSALNGILTGLVSITAGSGAYEPEAAFVVGVLGGVIYFFASNLLLRHHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFGYAVAYSEDRSDKCAGILYGGSGNSLAANIVFLIAVVAWVGLLTLVLFVVTKLTIGIRVSKQQELAGMDDSKHGGQTFPELL 571
+K M T I A G +T++L+ K+ GYWD G+A NG+L GLV +TAG EPE A V+G++ G +Y ++S +L+ +DDVV+A PVH F G WG+ +A LF++K Y+ AY DR DKCAG YGG GN++AAN+VF++AV+AWV + LF+ +G+RV K+ E GMDDSKHGGQT+PE++
Sbjct: 272 AKTMVTTTISAAFGAVTTVLLGKLNLGYWDAGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYSAAYYGDRVDKCAGAFYGGDGNAVAANVVFILAVIAWVSATCMALFLGINAVVGMRVDKEMEQIGMDDSKHGGQTYPEMV 461
BLAST of mRNA_E-fasciculatus_F_contig1358.2664.1 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI) HSP 1 Score: 200 bits (509), Expect = 6.800e-59 Identity = 95/190 (50.00%), Postives = 133/190 (70.00%), Query Frame = 2
Query: 2 SKVMGVTVIGGASGGITSLLVNKMQCGYWDTGSALNGILTGLVSITAGSGAYEPEAAFVVGVLGGVIYFFASNLLLRHHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFGYAVAYSEDRSDKCAGILYGGSGNSLAANIVFLIAVVAWVGLLTLVLFVVTKLTIGIRVSKQQELAGMDDSKHGGQTFPELL 571
+K M T I A G +T++L+ K G+WD G+A NG+L GLV +TAG EPE A V+G++ G +Y ++S +L+ +DDVV+A PVH F G WG+ +A LF++K Y +AY DR+DKCAG YGG+GN++ AN VF++AV AWV LF+ K+T+G+RV K+ E GMDDSKHGGQT+PE++
Sbjct: 268 AKTMVTTTISAAFGAVTTVLLGKFNLGHWDGGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYGMAYY-DRADKCAGAFYGGAGNAVGANFVFILAVTAWVVATCTALFMGIKMTVGMRVDKEMEQIGMDDSKHGGQTYPEMM 456
BLAST of mRNA_E-fasciculatus_F_contig1358.2664.1 vs. uniprot
Match: A0A835ZI90_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI90_9STRA) HSP 1 Score: 187 bits (474), Expect = 2.250e-53 Identity = 95/183 (51.91%), Postives = 126/183 (68.85%), Query Frame = 2
Query: 2 SKVMGVTVIGGASGGITSLLVNKMQCGYWDTGSALNGILTGLVSITAGSGAYEPEAAFVVGVLGGVIYFFASNLLLRHHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFGYAVAYSEDRSDKCAGILYGGSGNSLAANIVFLIAVVAWVGLLTLVLFVVTKLTIGIRVSKQQELAGMDDSKHGG 550
+KVM + + GA GG++S LV + GY D +A NGIL+G V+IT SG +PE A ++G + G+IY ASNLLL+ +DDVVNAAPVHLF GMWG+ + GL + + Y AY EDR+D C G YG GN LAA IVF++ +AW G+ + ++F V K T+G+RVSK+ E GMD SKHGG
Sbjct: 282 AKVMINSTLSGAIGGLSSTLVALLMNGYIDPAAANNGILSGFVAITGPSGVVQPEGALLIGFIAGLIYQGASNLLLKLRIDDVVNAAPVHLFCGMWGMFAVGLLAEEHNYGRAYYEDRADICCGAFYGCGGNQLAAQIVFILVNLAWTGVTSAIMFTVAKYTVGLRVSKEVEEMGMDSSKHGG 464
BLAST of mRNA_E-fasciculatus_F_contig1358.2664.1 vs. uniprot
Match: A0A7S2V0D8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0D8_9STRA) HSP 1 Score: 178 bits (452), Expect = 2.910e-53 Identity = 92/188 (48.94%), Postives = 126/188 (67.02%), Query Frame = 2
Query: 2 SKVMGVTVIGGASGGITSLLVNKMQCGYWDTGSALNGILTGLVSITAGSGAYEPEAAFVVGVLGGVIYFFASNLLLRHHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFGYAVAYSEDRSDKCAGILYGGSGNSLAANIVFLIAVVAWVGLLTLVLFVVTKLTIGIRVSKQQELAGMDDSKHGGQTFPE 565
++ M T I A+ IT++ + K G D G A NG+L GLVSITA E AF++G++GG++Y+ AS +L + +DDVV+A PVH+F GMWG+++AGLF+S+ YA AY DR+ C G YG G + AN+ F+ AV+AWV +L+LF K T+GIRVS + E AGMD SKHGGQT+PE
Sbjct: 5 ARTMVTTAIAAATAAITTVSLGKALTGVIDIGLANNGVLAGLVSITAPCSTCTGEGAFIIGIIGGLVYYGASKMLHKFKIDDVVDAVPVHMFCGMWGVIAAGLFASEENYASAYYGDRAADCCGAFYGCGGAAFGANLGFVFAVIAWVIGTSLLLFFGIKFTVGIRVSIEVEEAGMDSSKHGGQTYPE 192
BLAST of mRNA_E-fasciculatus_F_contig1358.2664.1 vs. uniprot
Match: A0A835ZB85_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB85_9STRA) HSP 1 Score: 176 bits (445), Expect = 4.110e-49 Identity = 90/183 (49.18%), Postives = 122/183 (66.67%), Query Frame = 2
Query: 2 SKVMGVTVIGGASGGITSLLVNKMQCGYWDTGSALNGILTGLVSITAGSGAYEPEAAFVVGVLGGVIYFFASNLLLRHHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFGYAVAYSEDRSDKCAGILYGGSGNSLAANIVFLIAVVAWVGLLTLVLFVVTKLTIGIRVSKQQELAGMDDSKHGG 550
+K M + + GA GG++S LV ++ G+ D +A NGIL+G V+ITAGSG +PE A ++G + G+IY S LLL+ +DDVVNAAPVHLF GMWG+ + GL + Y Y EDRS C G YG G+ L A IVF++ +AW G+ + ++F V K T+G+RVSK+ E GMD SKHGG
Sbjct: 277 AKTMINSTLSGAIGGLSSTLVAQVLDGFIDPAAANNGILSGFVAITAGSGVAQPEGAILIGFIAGIIYQATSKLLLKLRIDDVVNAAPVHLFCGMWGMFAVGLLAEPNNYGRVYYEDRSGICCGAFYGCGGSQLGAQIVFILVNLAWTGVTSALMFTVAKYTVGLRVSKEIEELGMDTSKHGG 459
BLAST of mRNA_E-fasciculatus_F_contig1358.2664.1 vs. uniprot
Match: A0A7S1UFZ4_9STRA (Ammonium transporter n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFZ4_9STRA) HSP 1 Score: 175 bits (443), Expect = 7.780e-49 Identity = 87/189 (46.03%), Postives = 128/189 (67.72%), Query Frame = 2
Query: 2 SKVMGVTVIGGASGGITSLLVNKMQCGYWDTGSALNGILTGLVSITAGSGAYEPEAAFVVGVLGGVIYFFASNLLLRHHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFGYAVAYSEDRSDKCAGILYGGSGNSLAANIVFLIAVVAWVGLLTLVLFVVTKLTIGIRVSKQQELAGMDDSKHGGQTFPEL 568
+KVM V+ IG A+ G +S++ +K D G+ALNG+L GLVSIT EP AF++G++GGV+Y ++ LL +DD VNAAPVH+F GMWG+++AGLF+++ Y+ AY DR++ CAGI YGG+G++L ANI F+I ++ WVG T V+F K +R++ +Q+ GMD +HGG + E
Sbjct: 279 AKVMVVSTIGAAAAGFSSVIFHKFMHNTVDLGAALNGVLGGLVSITGACAVIEPYGAFIIGLIGGVVYQLSAMLLESLKIDDCVNAAPVHMFCGMWGVIAAGLFATEQNYSNAYYSDRAEDCAGIFYGGNGSTLGANICFMICIILWVGATTSVMFGSLKAAGLLRLTDEQQATGMDILEHGGPAWVEF 467 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1358.2664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1358.2664.1 >prot_E-fasciculatus_F_contig1358.2664.1 ID=prot_E-fasciculatus_F_contig1358.2664.1|Name=mRNA_E-fasciculatus_F_contig1358.2664.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=204bp VEGDGSHGDRRCLRRHHLPPRQQDAVRVLGHRERLERHPHRPRVHHRRLGback to top mRNA from alignment at E-fasciculatus_F_contig1358:16163..18204- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1358.2664.1 ID=mRNA_E-fasciculatus_F_contig1358.2664.1|Name=mRNA_E-fasciculatus_F_contig1358.2664.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2042bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1358:16163..18204- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1358:16163..18204- >mRNA_E-fasciculatus_F_contig1358.2664.1 ID=mRNA_E-fasciculatus_F_contig1358.2664.1|Name=mRNA_E-fasciculatus_F_contig1358.2664.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1224bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1358:16163..18204- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |