mRNA_E-fasciculatus_F_contig13574.2661.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13574.2661.1 vs. uniprot
Match: D8LQ20_ECTSI (Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ20_ECTSI) HSP 1 Score: 436 bits (1120), Expect = 3.790e-153 Identity = 230/268 (85.82%), Postives = 232/268 (86.57%), Query Frame = 1
Query: 1 SPVRSCQQVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARRGDLGLLTISRIFGENSPLAGKALLKTDYVEEASVDECLKLAVKVLNKTMDSTTPSPEKMEFTTITRVNGKASFFFLLGHFIVHKILSDEESDKILKEVAAETATQGDV 804
SP QVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQA GKALLKTDYVEE+SVDECLKLAVKVLNKTMDSTTPSPEKMEFTTITRVNGK IVHKIL+DEESDKILKEVAAETATQGDV
Sbjct: 13 SPEGRLHQVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQA---------------------GKALLKTDYVEESSVDECLKLAVKVLNKTMDSTTPSPEKMEFTTITRVNGK----------IVHKILTDEESDKILKEVAAETATQGDV 249
BLAST of mRNA_E-fasciculatus_F_contig13574.2661.1 vs. uniprot
Match: A0A6V1N066_HETAK (Proteasome subunit alpha type n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N066_HETAK) HSP 1 Score: 337 bits (863), Expect = 5.010e-114 Identity = 171/268 (63.81%), Postives = 206/268 (76.87%), Query Frame = 1
Query: 1 SPVRSCQQVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARRGDLGLLTISRIFGENSPLAGKALLKTDYVEEASVDECLKLAVKVLNKTMDSTTPSPEKMEFTTITRVNGKASFFFLLGHFIVHKILSDEESDKILKEVAAETATQGDV 804
SP QVEYAIEAINNAGTCVG+LAKDGI+MAAER+ VSKLLAP+KTSEK YR+ ++ S VVAGLT+DAN+L+ AR+++QRYLY YG MPLEQLV+ VCNYKQAYTQ+GGLRPFGV+F+F GWDEH GFQLYHSDPSGNY GW A AIGANNQA GK+LLK +Y ++++V++CLKLA KVLNKTMD+TTPSPEKMEF T+ V+GK +VHKIL+D E+ KIL+EV AE +T+GD+
Sbjct: 13 SPEGRLHQVEYAIEAINNAGTCVGLLAKDGIVMAAERRTVSKLLAPAKTSEKVYRIDDHVSAVVAGLTSDANILLQQARLASQRYLYSYGAPMPLEQLVQRVCNYKQAYTQYGGLRPFGVAFMFAGWDEHFGFQLYHSDPSGNYSGWFANAIGANNQA---------------------GKSLLKNEYEQDSTVEQCLKLAAKVLNKTMDTTTPSPEKMEFFTLQMVDGK----------VVHKILTDAETAKILEEVQAEVSTEGDM 249
BLAST of mRNA_E-fasciculatus_F_contig13574.2661.1 vs. uniprot
Match: A0A836CL31_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL31_9STRA) HSP 1 Score: 330 bits (846), Expect = 2.000e-111 Identity = 175/269 (65.06%), Postives = 201/269 (74.72%), Query Frame = 1
Query: 1 SPVRSCQQVEYAIEAINNAGTCVGILAKD-GIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARRGDLGLLTISRIFGENSPLAGKALLKTDYVEEASVDECLKLAVKVLNKTMDSTTPSPEKMEFTTITRVNGKASFFFLLGHFIVHKILSDEESDKILKEVAAETATQGDV 804
SP QVEYAIEAINNAGTCVGILA D GI++AAERK VSKLLAPSKTSEKTY+L + SCVVAGLTADAN+L+N AR++AQRYLYQY E MP+EQLV+ VCN KQAYTQFGGLRPFGV+FLF GWD HHGFQLY SDPSGNYGGWKATAIGANNQA GK+LLK DY E S+++ L+LAVKVL KTMDST PS +KME TTI RVN K +V+K+L D E ++LK V ++ +T+GDV
Sbjct: 13 SPEGRLHQVEYAIEAINNAGTCVGILAGDNGIVLAAERKTVSKLLAPSKTSEKTYKLDDATSCVVAGLTADANILINQARLAAQRYLYQYQEAMPVEQLVQRVCNMKQAYTQFGGLRPFGVAFLFAGWDAHHGFQLYQSDPSGNYGGWKATAIGANNQA---------------------GKSLLKNDYAENMSMEDALQLAVKVLTKTMDSTAPSADKMELTTIQRVNDK----------VVYKVLDDAEVTRVLKLVESQKSTEGDV 250
BLAST of mRNA_E-fasciculatus_F_contig13574.2661.1 vs. uniprot
Match: A0A7S2XZ80_9STRA (Proteasome subunit alpha type n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ80_9STRA) HSP 1 Score: 327 bits (838), Expect = 3.170e-110 Identity = 169/268 (63.06%), Postives = 202/268 (75.37%), Query Frame = 1
Query: 1 SPVRSCQQVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARRGDLGLLTISRIFGENSPLAGKALLKTDYVEEASVDECLKLAVKVLNKTMDSTTPSPEKMEFTTITRVNGKASFFFLLGHFIVHKILSDEESDKILKEVAAETATQGDV 804
SP QVEYAIEAINNAGTCVGILA DGI+MAAER+ VSKLLAP+KTSEKTYR+ ++ + VVAGLTADAN+L+ ARV++QRYLYQY E MP+EQL++ VCNYKQAYTQFGGLRPFGVSFLF GWD+H+GFQLY SDPSGNYGGWKATAIGANNQA GK+LLKT+Y + +VDE L+LA KVLNK+MD+TTPS EKMEF T+T +G+ + H IL + E+ KIL++V A T+GD+
Sbjct: 13 SPEGRLHQVEYAIEAINNAGTCVGILATDGIVMAAERRTVSKLLAPAKTSEKTYRIDDHVAAVVAGLTADANILIQEARVASQRYLYQYQEPMPVEQLIERVCNYKQAYTQFGGLRPFGVSFLFAGWDKHYGFQLYQSDPSGNYGGWKATAIGANNQA---------------------GKSLLKTEYSDTLTVDEALELAAKVLNKSMDTTTPSAEKMEFFTLTLKDGQ----------VQHSILPEAETTKILEKVQAAATTEGDI 249
BLAST of mRNA_E-fasciculatus_F_contig13574.2661.1 vs. uniprot
Match: A0A8K1FDB1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDB1_PYTOL) HSP 1 Score: 304 bits (778), Expect = 4.300e-101 Identity = 161/269 (59.85%), Postives = 196/269 (72.86%), Query Frame = 1
Query: 1 SPVRSCQQVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARRGDLGLLTISRIFGENSPLAGKALLKTDYVEEASVDECLKLAVKVLNKTMDSTTPSPEKMEFTTITR-VNGKASFFFLLGHFIVHKILSDEESDKILKEVAAETATQGDV 804
SP QVEYA+ AI+NAG+ VGILAKDG+++AAE+K VSKLLAPSKTSEKT +L ++ C VAGLTADAN+L+N+AR++AQRY Y E+ P EQLV+ +CNYKQAYTQFGG RPFGVSFLF GWD HHGFQLYHSDPSGNYGGWKATAIGANN+A K+LLK +Y E +V + LK AVKV++KTMDST+ S EK+EFTT+TR NGK +VH+ L+ E+D +LKEV AE A+ GD+
Sbjct: 13 SPEGRLFQVEYAMAAIDNAGSAVGILAKDGVVIAAEKKTVSKLLAPSKTSEKTIKLDDHLLCAVAGLTADANILINYARLTAQRYELAYQEKQPCEQLVQALCNYKQAYTQFGGQRPFGVSFLFAGWDRHHGFQLYHSDPSGNYGGWKATAIGANNRA---------------------AKSLLKNEYDENLNVSDALKFAVKVMSKTMDSTSLSAEKLEFTTVTRDENGK----------VVHRQLTQAETDALLKEVEAEKASAGDI 250
BLAST of mRNA_E-fasciculatus_F_contig13574.2661.1 vs. uniprot
Match: A0A024URF4_9STRA (Proteasome subunit alpha type n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024URF4_9STRA) HSP 1 Score: 301 bits (770), Expect = 7.060e-100 Identity = 159/269 (59.11%), Postives = 194/269 (72.12%), Query Frame = 1
Query: 1 SPVRSCQQVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARRGDLGLLTISRIFGENSPLAGKALLKTDYVEEASVDECLKLAVKVLNKTMDSTTPSPEKMEFTTITR-VNGKASFFFLLGHFIVHKILSDEESDKILKEVAAETATQGDV 804
SP QVEYA+EAINNAG+ VGILAKDGI++AAE+K VSKLLAP K SEKT +L ++ C VAGLT+DAN+LVN+AR+SAQRY Y E P EQLV+ +CNYKQAYTQFGG RPFGVSFL+ GWD H GFQLYHSDPSGNYGGWKATAIGANN+A K LLK+DY E +V+E LK +VKV+ KTMD+TTP+ EK+EF+T+TR GK +VH++L+ E+D +LK+V A+TA GD+
Sbjct: 13 SPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLAPVKNSEKTMKLDDHIICAVAGLTSDANILVNYARLSAQRYQLSYQEHQPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHFGFQLYHSDPSGNYGGWKATAIGANNRA---------------------AKNLLKSDYQEGMTVEEALKFSVKVMAKTMDTTTPTAEKLEFSTLTRNEQGK----------LVHRLLTAAETDALLKDVGAQTADSGDI 250
BLAST of mRNA_E-fasciculatus_F_contig13574.2661.1 vs. uniprot
Match: K3XBK9_GLOUD (Proteasome subunit alpha type n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBK9_GLOUD) HSP 1 Score: 300 bits (769), Expect = 1.040e-99 Identity = 157/270 (58.15%), Postives = 192/270 (71.11%), Query Frame = 1
Query: 1 SPVRSCQQVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARRGDLGLLTISRIFGENSPLAGKALLKTDYVEEASVDECLKLAVKVLNKTMDSTTPSPEKMEFTTITR--VNGKASFFFLLGHFIVHKILSDEESDKILKEVAAETATQGDV 804
SP QVEYA+EAINNAG+ VGILAKDGI++AAE+K +SKLL PSKTSEKT +L ++ C VAGLTADAN+LVN+AR++AQRY Y E+ P EQLV+ +CNYKQAYTQFGG RPFGVSFL+ GWD HHGFQLYHSDPSGNYGGWKATAIGANN A K+LLK +Y + +V++ LK AVKV+ KTMD+T PS EK+EFTT+TR GK I+H+ L+ +E+D +L A TA+ GD+
Sbjct: 13 SPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTISKLLTPSKTSEKTIKLDDHLICAVAGLTADANILVNYARLAAQRYELAYQEKNPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHHGFQLYHSDPSGNYGGWKATAIGANNGA---------------------AKSLLKNEYEDTMTVEDALKFAVKVMGKTMDTTAPSSEKLEFTTVTRDAATGK----------IIHRQLTQQETDALLASAEASTASSGDI 251
BLAST of mRNA_E-fasciculatus_F_contig13574.2661.1 vs. uniprot
Match: A0A1W0AA87_9STRA (Proteasome subunit alpha type n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AA87_9STRA) HSP 1 Score: 299 bits (766), Expect = 2.860e-99 Identity = 156/269 (57.99%), Postives = 194/269 (72.12%), Query Frame = 1
Query: 1 SPVRSCQQVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARRGDLGLLTISRIFGENSPLAGKALLKTDYVEEASVDECLKLAVKVLNKTMDSTTPSPEKMEFTTITR-VNGKASFFFLLGHFIVHKILSDEESDKILKEVAAETATQGDV 804
SP QVEYA+EAINNAG+ VGILAKDGI++AAE+K VS LLAP K+SEKT ++ ++ C VAGLT+DAN+LVN+ARVSAQRY Y E+ P EQLV+ +CNYKQAYTQFGG RPFGVSFL+ GWD H GFQLYHSDPSGNYGGWKATAIGANN+A K++LK DY E+ +VDE LK +VKV+ KTMD+TTP+ EK+EF+T+TR NGK ++H++LS E++ +LKE + A GD+
Sbjct: 13 SPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSALLAPVKSSEKTMKIDDHIICAVAGLTSDANILVNYARVSAQRYELSYQEKQPCEQLVQAICNYKQAYTQFGGQRPFGVSFLYAGWDRHFGFQLYHSDPSGNYGGWKATAIGANNRA---------------------AKSMLKNDYKEDMTVDEALKFSVKVMGKTMDTTTPTAEKLEFSTLTRSANGK----------LIHRLLSAAETELLLKEADLQAAESGDM 250
BLAST of mRNA_E-fasciculatus_F_contig13574.2661.1 vs. uniprot
Match: A0A484DTJ8_BRELC (Proteasome subunit beta n=15 Tax=Peronosporaceae TaxID=4777 RepID=A0A484DTJ8_BRELC) HSP 1 Score: 300 bits (767), Expect = 5.740e-99 Identity = 156/262 (59.54%), Postives = 196/262 (74.81%), Query Frame = 1
Query: 22 QVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARRGDLGLLTISRIFGENSPLAGKALLKTDYVEEASVDECLKLAVKVLNKTMDSTTPSPEKMEFTTITR-VNGKASFFFLLGHFIVHKILSDEESDKILKEVAAETATQGDV 804
QVEYA+EAINNAG+ VGILAKDGI++AAE+K +SKLL PSKTSEKT +L ++ C VAGLTADAN+LV+ AR+SAQRY Y E+ P EQLV+ +CNYKQAYTQFGG RPFGVSFL+ GWD HHGFQLYHSDPSGNYGGWKATAIGANN+A K++LK +Y + +VDE L VKV+NKTMDST+ S EK+EFTT+TR V+GK +VH+ L+++E++++L++VA + AT GD+
Sbjct: 51 QVEYAMEAINNAGSAVGILAKDGIVIAAEKKTISKLLTPSKTSEKTIKLDDHLICAVAGLTADANILVSFARLSAQRYELAYQEKEPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHHGFQLYHSDPSGNYGGWKATAIGANNRA---------------------AKSMLKNEYEDGMTVDEALAFLVKVMNKTMDSTSSSAEKLEFTTVTRSVDGK----------VVHRQLTEKETNELLQKVAVDMATFGDM 281
BLAST of mRNA_E-fasciculatus_F_contig13574.2661.1 vs. uniprot
Match: M4C226_HYAAE (Proteasome subunit beta n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C226_HYAAE) HSP 1 Score: 298 bits (763), Expect = 5.810e-99 Identity = 154/256 (60.16%), Postives = 193/256 (75.39%), Query Frame = 1
Query: 40 EAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARRGDLGLLTISRIFGENSPLAGKALLKTDYVEEASVDECLKLAVKVLNKTMDSTTPSPEKMEFTTITR-VNGKASFFFLLGHFIVHKILSDEESDKILKEVAAETATQGDV 804
EAINNAG+ VGILAKDGI++AAE+K VSKLL PSKTS+KT +L ++ C VAGLTADAN+LVN+AR+SAQRY Y E+ P EQLV+ +CNYKQAYTQFGG RPFGVSFL+ GWD HHGFQLYHSDPSGNYGGWKATAIGANN+A K++LK+DY ++ +V+E L +VKV+NKTMDSTTP+ EK+EFTT+TR +GK IVH+ L+++E++ +L+E AA+TA GD+
Sbjct: 16 EAINNAGSAVGILAKDGIVIAAEKKTVSKLLTPSKTSDKTIKLDDHLICAVAGLTADANILVNYARLSAQRYELAYQEKEPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHHGFQLYHSDPSGNYGGWKATAIGANNRA---------------------AKSMLKSDYEKDMTVEEALVFSVKVMNKTMDSTTPTAEKVEFTTVTRNADGK----------IVHRQLTEKETEALLQEAAADTAASGDM 240 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13574.2661.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13574.2661.1 >prot_E-fasciculatus_F_contig13574.2661.1 ID=prot_E-fasciculatus_F_contig13574.2661.1|Name=mRNA_E-fasciculatus_F_contig13574.2661.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=269bp SPVRSCQQVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSback to top mRNA from alignment at E-fasciculatus_F_contig13574:183..3563+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13574.2661.1 ID=mRNA_E-fasciculatus_F_contig13574.2661.1|Name=mRNA_E-fasciculatus_F_contig13574.2661.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3381bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13574:183..3563+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13574:183..3563+ >mRNA_E-fasciculatus_F_contig13574.2661.1 ID=mRNA_E-fasciculatus_F_contig13574.2661.1|Name=mRNA_E-fasciculatus_F_contig13574.2661.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1614bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13574:183..3563+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |