mRNA_E-fasciculatus_F_contig1357.2657.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1357.2657.1
Unique NamemRNA_E-fasciculatus_F_contig1357.2657.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1357.2657.1 vs. uniprot
Match: D7FS75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS75_ECTSI)

HSP 1 Score: 385 bits (988), Expect = 6.640e-128
Identity = 216/234 (92.31%), Postives = 223/234 (95.30%), Query Frame = 2 
Query:   44 MKVAALALVATGTASAAQQQPCFVPSVGGGLRPAARTTSSSSVQMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGTMDKYKSKVNEKRAQADAKANKWKWQTAKSSSDPLVAWKKMKKEGKIDEIYDEDENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSIFGWNKKKEEKAEAAPKSAAKKGAKGKKPAPATETKPKKTGWW 745
            MKVAALALVAT TASAAQQQ CFVPSVGGGLRP+++TTSSS +QMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNNKG MDKYKSKVNEKRAQADAKANKWKWQT KSS DPLVAWKKMK EGKIDE+Y+E ENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGS+FGWNKK EE AEAAPKSAAKKGAKGKKPAPATE KPKKTGWW
Sbjct:    1 MKVAALALVATSTASAAQQQSCFVPSVGGGLRPSSKTTSSS-MQMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGAMDKYKSKVNEKRAQADAKANKWKWQTEKSSFDPLVAWKKMKSEGKIDEVYEEGENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSVFGWNKK-EETAEAAPKSAAKKGAKGKKPAPATEAKPKKTGWW 232
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1357.2657.1 vs. uniprot
Match: A0A835Z067_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z067_9STRA)

HSP 1 Score: 128 bits (322), Expect = 3.790e-30
Identity = 92/168 (54.76%), Postives = 113/168 (67.26%), Query Frame = 2 
Query:  230 VDENWKAQQEMLKRRNNKGTMDKYKSKVNEKRAQADAKANKWKWQTAKSSSDPLVAWKKMKKEGKIDEIYDEDENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSIFGWNKKKEEKAEAAPKSAAKKGAKGKKPAPATETKPKK 733
            +D  ++ QQE+L RR NK  M++YK +V   RA AD K  +W WQ      DPL  W+KM+ EGKI ++Y+E EN+EGGIPIP ASFGVGG XXXXXXXXXXXXXDLRLPY DQGYVD D A +  +G  FG  KKK+    AAP  A+K+ +  K  AP  +   KK
Sbjct:   48 MDAAFRDQQEILARRRNKNKMEEYKKQVEANRAVADEKVTRWAWQRRSDGKDPLTDWQKMRAEGKIPDVYEEGENQEGGIPIPSASFGVGGXXXXXXXXXXXXXXDLRLPYVDQGYVD-DSADV--MGKFFGGGKKKK---PAAPAPASKQASAAKPAAPTNKFGAKK 209
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BLAST of mRNA_E-fasciculatus_F_contig1357.2657.1 vs. uniprot
Match: A0A7R9ZRA3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRA3_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.200e-25
Identity = 92/185 (49.73%), Postives = 118/185 (63.78%), Query Frame = 2 
Query:  110 FVPSVGGGLRPAARTTSSSSVQMKLWDFGLNREAI-TGPSQVDENWKAQQEMLKRRNN-KGTMDKYKSKVNEKRAQADAKANK-WKWQTA--KSSSDPLVAWKKMKKEGKIDEIYDE--DENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSIFGWNKKKE 643
            FVP V         T S S+ Q+++  F  N +A  +G   +DE W+AQQE+LKRRN  K   D Y +K+ ++R +A  K N  W WQ+   K   DP+  WKK +K G+I ++ D+  D  + GGIP+PMASFGVGG XXXXXXXXXXXXX LRLPYA+QGYVD D   M   G +FG NKKK+
Sbjct:   25 FVPQV---------TPSHSTTQLRMGWFDNNFKAGGSGRDDLDEQWEAQQEILKRRNKPKAERDAYFAKIEDRREEASKKQNDMWAWQSKSYKKGEDPIDEWKKRRKSGQISDLNDQYGDPKKVGGIPMPMASFGVGGEXXXXXXXXXXXXXXLRLPYAEQGYVDDDADFM---GKLFGKNKKKQ 197
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BLAST of mRNA_E-fasciculatus_F_contig1357.2657.1 vs. uniprot
Match: A0A7S2A710_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A710_9STRA)

HSP 1 Score: 115 bits (287), Expect = 6.090e-25
Identity = 96/209 (45.93%), Postives = 123/209 (58.85%), Query Frame = 2 
Query:   41 IMKVAALALVATGTASAAQQQP---CFVPSVGGGLRPAARTTSSSSVQMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGT-MDKYKSKVNEKRAQADAKANK-WKWQTAK--SSSDPLVAWKKMKKEGKIDEIYDE--DENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSIFGWNKKK 640
            IM  +  A+VA G A+AA   P    F      G  P  ++ +SS   +  +  G N++ +      DE W+AQQE+LKRR       +KY   + E+RA+A  K N  W WQT K     DPL  WKK +  G+I ++ ++  D  + GGIP+PMASFGVGG XXXXXXXXXXXXX LRLPYADQGYVD D   M K+G+ F   KKK
Sbjct:   49 IMVFSKRAIVACGVAAAAVSLPSGAAFTSPTTSG--PMCQSATSSPSALYFFGQGSNKDKL------DEEWEAQQEILKRRRAPAAEREKYFEAIEERRAEASKKQNDMWGWQTKKYAKGEDPLDEWKKRRATGEISDLDNQYGDPKKVGGIPLPMASFGVGGEXXXXXXXXXXXXXXLRLPYADQGYVDEDADVMAKLGNFFSGGKKK 249
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1357.2657.1 vs. uniprot
Match: A0A7S2AW55_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AW55_9STRA)

HSP 1 Score: 111 bits (278), Expect = 3.920e-24
Identity = 84/167 (50.30%), Postives = 101/167 (60.48%), Query Frame = 2 
Query:  185 WDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGTMDKYKSKVNEKRAQADAKANKWKWQTAKSSSDPLVAWKKMKKEGKIDEIYDEDENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSIFGWNKKKEEKAEAAPKSAAKKG 685
            WDF    E+    ++ +     QQ +L RR NKG   +Y   V + RA++D +   WK+QT     DPLV WKK+K EGKI ++   DE   GGIPIPMASFGVGG XXXXXXXXXX   DLRLPYADQGYVD D   M   G +FG  K K E  E   ++  KKG
Sbjct:   69 WDFF--GESPEKKAEKEAQLAEQQAILSRRRNKGKQQEYFENVEKNRAKSDEERKMWKFQTRTDGEDPLVEWKKLKSEGKIKKLK-RDEGPGGGIPIPMASFGVGGEXXXXXXXXXXERFDLRLPYADQGYVDEDADVM---GKLFGKRKAKAEVPEEDEEAKTKKG 229
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1357.2657.1 vs. uniprot
Match: A0A6V0XRQ8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V0XRQ8_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.130e-23
Identity = 87/211 (41.23%), Postives = 125/211 (59.24%), Query Frame = 2 
Query:  131 GLRPAARTTSSSSVQMKLWDFGLNREAITGPSQVDENWKAQQEMLK-RRNNKGTMDKYKSKVNEKRAQA-DAKANKWKWQTA--KSSSDPLVAWKKMKKEGKIDEIYDE--DENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSIFGWNKKKEEKAEAAPKSAAKKGAKGKKPAPATETKPKKTGWW 745
            G  PA+ +T+S+S    L  FG      TG   +DE W+ QQE+LK R+ +    +KY   V+++R +A + + +KW WQ    K   DP+  W+K ++ G+I ++ ++  D  + GGIP+PMASFGVGG XXXXXXXXXXXXX LRLPYA+QG+VD +      +G++FG  KKK +K E              +P      +PKK G+W
Sbjct:   20 GFAPASHSTTSTSTSSALHFFGGG----TGAKDLDEEWERQQELLKLRQASPEDREKYFKSVDDRRIKATEEQIDKWAWQKKQYKKGEDPIDEWRKRRESGQISDLENQYGDPKKIGGIPLPMASFGVGGEXXXXXXXXXXXXXXLRLPYAEQGWVDEEAEENNFLGNLFGGGKKKAKKVE--------------EPVEEETPEPKKNGFW 212
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1357.2657.1 vs. uniprot
Match: A0A7S2SJC5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJC5_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.520e-23
Identity = 79/178 (44.38%), Postives = 112/178 (62.92%), Query Frame = 2 
Query:  110 FVPSVGGGLRPAARTTSSSSVQMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGTMDKYKSKVNEKRAQADAKANKWKWQTAKSSSDPLVAWKKMKKEGKIDEIYDEDENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSIFGWNKKKE 643
            FVP+  GGL  A +     +++ +   FG   E      + +E  +AQ+E+L RR +K  +D+Y   V  +R Q+D     W +QT  +  DPL+ WK++++EGKI ++  + E +EGGIPIP+ SFGVGGSXXXXXXXXX    DLRLPYA+QGYVD D   M K+G +F + + KE
Sbjct:   50 FVPAPAGGLLQA-KGARGQAIRREWGIFGDKSEEKK--REEEEAMQAQREILARRKSKSKVDEYFKDVETRRRQSDEDRKIWSFQTD-TKQDPLIKWKQLRQEGKIKDL--KREGQEGGIPIPLPSFGVGGSXXXXXXXXXGERFDLRLPYAEQGYVDEDADVMGKLGRMFSFGRGKE 221
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BLAST of mRNA_E-fasciculatus_F_contig1357.2657.1 vs. uniprot
Match: A0A7S2K8B2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8B2_9STRA)

HSP 1 Score: 108 bits (271), Expect = 3.500e-23
Identity = 91/201 (45.27%), Postives = 126/201 (62.69%), Query Frame = 2 
Query:   62 ALVATGTASAAQQQPCFVPSVGGGLRPAARTTSSSSVQMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNN-KGTMDKYKSKVNEKRAQADA-KANKWKWQTA--KSSSDPLVAWKKMKKEGKIDEIYDE--DENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSIFGWNKKKEE 646
            AL+AT  A +A Q   F PS           +++SS++M L+D  +     +G  + DE ++ QQE+L+RR   +   D Y + V ++R QA   + +KW WQT   K   DP+  WKK +  G+I ++ D+  +E ++GGIP+PMASFGVGG XXXXXXXXXXXXX LRLPYADQGYVD D   M K+ S+F   KK++E
Sbjct:   20 ALIATTIAFSASQGIAFAPSNNVRSNGLIAASTTSSLKMGLFDNWV--AGGSGKDRRDEEFEKQQEILRRRRAPQAERDAYFNTVEKRRQQASIDQQDKWAWQTKTYKKGEDPIDEWKKRRASGQISDLDDQYGEEEKKGGIPMPMASFGVGGEXXXXXXXXXXXXXXLRLPYADQGYVDEDADFMGKLTSMFTGKKKEKE 218
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BLAST of mRNA_E-fasciculatus_F_contig1357.2657.1 vs. uniprot
Match: B7FWS1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FWS1_PHATC)

HSP 1 Score: 107 bits (267), Expect = 7.810e-23
Identity = 87/177 (49.15%), Postives = 108/177 (61.02%), Query Frame = 2 
Query:  128 GGLRPAARTTSSSSVQMKLWDFGLNREAITGPSQVDENWKAQQEML-KRRNNKGTMDKYKSKVNEKRAQADAKA-NKWKWQTAKSSS--DPLVAWKKMKKEGKIDEIYDE--DENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSIFGWNKKK 640
            G     A    S+++ M L+D    R   +G   +DE W+ QQE+L +RR  K   DKY  KV ++R QA AK  + W WQT   S   DP+  WKK + +G I ++ ++  D  + GGIPIP ASFGVGG XXXXXXXXXXXXX LRLPYADQGYVD D   M KI + FG   KK
Sbjct:   18 GAFVTPANAAKSTALPMGLFDDW--RAGGSGKDSLDEEWEKQQEILAERRKPKAERDKYFEKVEQRRQQASAKQKDMWAWQTKSYSKGEDPIDEWKKRRADGTISDLENQYGDPKKIGGIPIPGASFGVGGXXXXXXXXXXXXXXXLRLPYADQGYVDDDADVMGKISAFFGGGTKK 192
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1357.2657.1 vs. uniprot
Match: A0A7S3P2V2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P2V2_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.720e-22
Identity = 96/239 (40.17%), Postives = 122/239 (51.05%), Query Frame = 2 
Query:   44 MKVAALALVATGTASAAQQQPCFVPSVGGGLRPAARTTSSSSVQMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGTMDKYKSKVNEKRAQADAKANK-WKWQTAK--SSSDPLVAWKKMKKEGKIDEIYDE--DENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSIFGWNKKKEEKAEAAPKSAAKKGAKGKKPAPATETKPKKTGWW 745
            MK+AA  L+A   ASA+               P AR  ++ +    L+D             +DE W+ QQE+L  R +      Y  KV E R +A  K ++ W WQT K     DP+  W+K + +G I ++ ++  D  + GGIPIP ASFGVGG XXXXXXXXXXXXX LRLPYADQGYVD D   M K+ S FG  KKKE +                 P P  +  PKK G W
Sbjct:   14 MKIAAGILLAGTIASAS------------AFMPTARPQTTETALQGLFD-SWRAGGTASQDDLDEQWQRQQEILANRRDPTKTKAYFDKVEENRKEASRKQSEMWSWQTKKYGKGEDPIDEWRKRRADGSISDLENQYGDPKKIGGIPIPGASFGVGGXXXXXXXXXXXXXXXLRLPYADQGYVDEDSDVMGKLASFFGGGKKKEPE-----------------PEPVKDEPPKKKGGW 222
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1357.2657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS75_ECTSI6.640e-12892.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z067_9STRA3.790e-3054.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9ZRA3_9STRA1.200e-2549.73Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2A710_9STRA6.090e-2545.93Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2AW55_9STRA3.920e-2450.30Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6V0XRQ8_9STRA1.130e-2341.23Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2SJC5_9STRA1.520e-2344.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2K8B2_9STRA3.500e-2345.27Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B7FWS1_PHATC7.810e-2349.15Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S3P2V2_9STRA1.720e-2240.17Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1357contigE-fasciculatus_F_contig1357:12427..17564 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score389.4
Seed ortholog evalue1.2e-105
Seed eggNOG ortholog2880.D7FS75
EggNOG OGs2CSXX@1,2S4AJ@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_000830.1
Exons6
Model size1882
Cds size705
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1357.2657.1prot_E-fasciculatus_F_contig1357.2657.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1357 12470..16430 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927854.199162-UTR-E-fasciculatus_F_contig1357:12426..124691622927854.199162-UTR-E-fasciculatus_F_contig1357:12426..12469Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1357 12427..12469 +
1695995724.3224208-UTR-E-fasciculatus_F_contig1357:12426..124691695995724.3224208-UTR-E-fasciculatus_F_contig1357:12426..12469Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1357 12427..12469 +
1622927854.292775-UTR-E-fasciculatus_F_contig1357:16430..175641622927854.292775-UTR-E-fasciculatus_F_contig1357:16430..17564Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1357 16431..17564 +
1695995724.3866243-UTR-E-fasciculatus_F_contig1357:16430..175641695995724.3866243-UTR-E-fasciculatus_F_contig1357:16430..17564Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1357 16431..17564 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927854.2112374-CDS-E-fasciculatus_F_contig1357:12469..126341622927854.2112374-CDS-E-fasciculatus_F_contig1357:12469..12634Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1357 12470..12634 +
1695995724.331797-CDS-E-fasciculatus_F_contig1357:12469..126341695995724.331797-CDS-E-fasciculatus_F_contig1357:12469..12634Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1357 12470..12634 +
1622927854.2221608-CDS-E-fasciculatus_F_contig1357:13435..135031622927854.2221608-CDS-E-fasciculatus_F_contig1357:13435..13503Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1357 13436..13503 +
1695995724.3398325-CDS-E-fasciculatus_F_contig1357:13435..135031695995724.3398325-CDS-E-fasciculatus_F_contig1357:13435..13503Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1357 13436..13503 +
1622927854.2348928-CDS-E-fasciculatus_F_contig1357:13800..138671622927854.2348928-CDS-E-fasciculatus_F_contig1357:13800..13867Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1357 13801..13867 +
1695995724.349972-CDS-E-fasciculatus_F_contig1357:13800..138671695995724.349972-CDS-E-fasciculatus_F_contig1357:13800..13867Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1357 13801..13867 +
1622927854.2499423-CDS-E-fasciculatus_F_contig1357:14373..144721622927854.2499423-CDS-E-fasciculatus_F_contig1357:14373..14472Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1357 14374..14472 +
1695995724.3610482-CDS-E-fasciculatus_F_contig1357:14373..144721695995724.3610482-CDS-E-fasciculatus_F_contig1357:14373..14472Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1357 14374..14472 +
1622927854.2606754-CDS-E-fasciculatus_F_contig1357:14990..151191622927854.2606754-CDS-E-fasciculatus_F_contig1357:14990..15119Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1357 14991..15119 +
1695995724.3694918-CDS-E-fasciculatus_F_contig1357:14990..151191695995724.3694918-CDS-E-fasciculatus_F_contig1357:14990..15119Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1357 14991..15119 +
1622927854.2783496-CDS-E-fasciculatus_F_contig1357:16253..164301622927854.2783496-CDS-E-fasciculatus_F_contig1357:16253..16430Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1357 16254..16430 +
1695995724.3779328-CDS-E-fasciculatus_F_contig1357:16253..164301695995724.3779328-CDS-E-fasciculatus_F_contig1357:16253..16430Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1357 16254..16430 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1357.2657.1

>prot_E-fasciculatus_F_contig1357.2657.1 ID=prot_E-fasciculatus_F_contig1357.2657.1|Name=mRNA_E-fasciculatus_F_contig1357.2657.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=235bp
MKVAALALVATGTASAAQQQPCFVPSVGGGLRPAARTTSSSSVQMKLWDF
GLNREAITGPSQVDENWKAQQEMLKRRNNKGTMDKYKSKVNEKRAQADAK
ANKWKWQTAKSSSDPLVAWKKMKKEGKIDEIYDEDENEEGGIPIPMASFG
VGGSFGVGGKWDEGGRFDLRLPYADQGYVDPDEAPMKKIGSIFGWNKKKE
EKAEAAPKSAAKKGAKGKKPAPATETKPKKTGWW*
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mRNA from alignment at E-fasciculatus_F_contig1357:12427..17564+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1357.2657.1 ID=mRNA_E-fasciculatus_F_contig1357.2657.1|Name=mRNA_E-fasciculatus_F_contig1357.2657.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5138bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1357:12427..17564+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACGCTCCATCCCCTGACACGAGAGTACCGGACGAAATTACATCATGAAGG
TAGCAGCTCTAGCACTAGTGGCGACTGGCACGGCTTCGGCCGCGCAGCAG
CAGCCATGCTTCGTCCCATCAGTCGGAGGCGGTCTCCGGCCAGCTGCAAG
GACGACGAGCAGCAGCAGCGTGCAGATGAAGCTTTGGGATTTCGGGCTCA
ACCGCGAGGTACGGTCAAGGTCAAGCTCTTGCCGCTACTTCTCTGGACGT
TTCTGTTCCTCGTCTGGAGTGTGATGCCTTTCAGTGTTGGAGAGGGGCAA
GGAGAAAACCCTCCAAATTGATATACAGCAGTCTCTTTGCCGGTCCGGTT
TGATGACTCGACCGCTGTCATCGTTACGTACTGCTTTTCGCTTGACGTGG
CTAAATTTTGTTCTACCTTCCAGCTGCCTTGAAGCGGAAATTCGCCGCAT
GTAGCATATCTACCTGGTATGCATAGCAAACGCAAGAGAGAGAGAGACGC
ATCCCCTCTGTATCCTCCCGCCTACCAGAACCCGAGTACCGGCGGCTCGG
AAGTTGGGGTGGTGATGCGTGATGCCGTTGTCGTTGAGATAGACTATCCA
ATTGGAATGGCGATGTCGCATGATCTTGATGGAACCATGGTCGTGGCATC
GAAATACACCGCCGCACCCCCCCCCTCGTCAAAGCTGTTACATACGTCCT
CAAGGGCTTCGGATTCGGCGGGGGGGGCTGGCACGCCCCCTGTCGTCCTT
TTGGGGATGGGAGGAGCTGATTGCGTAAGAAAGTGGTATCTAGGGATAAA
CAAACTGCTCACTCTAAGTGGCACGGCGTGAGGAAGAACACAGGTACAGT
CAGTAGTGCAAGCCAGAAGGGAGCTGGTGCAAGAACACACCGGATGTGCA
AAGAGCAGCCACTGCACACGATGGCCCTAACGCGTGTCAATTGATTATTG
TACACGTTCGCCGCTGCTGCTGCTGCTGCTGCTGCTGCAACCGCTGCTGC
CTTTAACAGGCGATCACAGGACCATCACAGGTGGACGAGAACTGGAAGGC
TCAGCAAGAAATGCTCAAGCGACGAAAGTGAGAAGAGGGAGCGTCAACGA
GTACTACATGTACACTTACAGCCCTTGGGATGACAACGACGAACGCTGGA
CAAGCCGGTTGTAGTGGATGCTCCGCACGCAGCAGAACATGTGATGTGAA
AATTGTCGTTGAGTTTTCATCTCTGTCCTACCGGTACAAAAGCATTTAGC
CCTCTTGGACTACGTGTACGTCTATTAATAGCGTCTTGGCGCGTTCTCTG
AATTGCGTCTTGGCACGTTCTCTGAATCACTCAGTGGTCGTTTGCTGCCG
TCTCCGCTCCTCCCCGCCGTACAGCAACAAGGGCACCATGGACAAGTACA
AGTCCAAGGTCAACGAGAAGAGGGCACAAGCCGACGCGAAGGTATCAAGT
AAAAACACAAGAAGAACGCCGCCTGAAATAGACACGATCACCGCAGGACG
TGCTGTTCGTAGTCATGTAATCGTGATACAGATGTCTTGTTATCCCGATA
AGTCTTTATGTGATAATGGCGGGACGGATCGGCGGTGAACACGGCAAGAC
GGCCGTGCATGGATCTGATGAAACAAGACCGTGTTTCCAACAGAAATAAG
ACGTTTTTGCTGAGAGCGTGAAATCAATCGCAGTTAGATAGATGCCACTC
TGCCCCACTTGCAGTTTTTTCTTTTTTTGGTTCCCTCCTATCATTGGACT
CTGTCGTCTGTCCCTCTGGCCCCTATCCTCCACTTCTACTAGCTAGACGA
CCCAACCGGTATGTCGTCGCCGCAAAAGCCTTTTTCACCGACCGCCACCA
AGTCGGCATGCATGTTCCGTTTCTGAGCATGAAGTCGCTTGCTGATCTTC
TCTCTGCGAAACGCTTTTGTTTCTCTCGTCATCGTCGTTCTCTGCAGGCG
AACAAGTGGAAGTGGCAGACCGCCAAGTCCAGCTCGGACCCGCTCGTGGC
GTGGAAGAAGATGAAGAAAGAGGGCAAGATCGACGAGATTTACGACGTGA
GAGAGAGACACACACACACACAAAAAGAGCCAGTCTTTTGGTGTTTGTAC
TTGTATTTTTCTTTCAAAAAAAGAGCCAGCGATAGGTTAGAAAAGAGAGA
CAGACAGACAGGAAAGACAGAGAAGCACGATCTCCTCCATGGCATTCACA
AGCTTGGCCCTCATGTCGAGGGGGTACGCAGACTAGAAAGTGAAATGCGC
TCCCCTCCGAAACGAACATATATGTATGCGGCCCGCTCACCGGCGCCCGT
CCTAGCCATCGGTTATTGCACCCTGACTGCCGCACAAGCGAGTCTCTTCT
CTTCGATCGAAGAGACCATCACCAGACGACTCTTGCATGTGAATTCACTC
CTTGACTCGGAGACAACCAATCCCCTCAAAGCAACGCGTTTGCTTGAATT
TTTTTTTCGTCATTGGCATCGACCGCGCTAACCGCCTGACAACAGGCAAT
GATTCTGAAGGCCATGATGTTTGCGTGTTTGTGTGTGTGCCTTTCTTTCT
TTCCGGTCGGTCAGGAGGATGAGAACGAAGAAGGCGGTATCCCGATCCCG
ATGGCCAGCTTCGGGGTGGGAGGCAGCTTCGGCGTCGGCGGAAAGTGGGA
CGAGGGCGGACGGTTCGACCTCCGACTTCCCTACGCCGACCAGGTGCAAA
GCCCAAATTGTTTTTTTTTTTTATTGTTTTGTGGTTTCTATTTCTTAGTT
TTGGTTCAGACGCTTGGTTGCCTGCCCGCGCCCCAAGCGGAACACTACCG
GTATACACGTGTAATACAAGACTACCCGTTCAAGTTAATACTGCAGCCGA
AGGGGTGTGTTGGAGTTCTTACAGTTACAGCAGTGAGTGGGCAGGGGAAC
CTACTGGCTGCTGGGCTCATTAAATACGTAGACCCGGGACCAAGCAGATT
TTCGCGGCTGCTTCATTTATACCACCGCTTTATCTTTTTTCTCTTACTAC
ACCTAGAGTTGCCGTTTTTCACATATTGTTTGAGGTCCCTGCTGCTTTAG
TAAGGGCTGAGAAAGTCAGAAGCCTCTTTGATTTTGACACGTTGAGCAAG
AAATTGACGGGCCCCTCGTCGAGTCGCGTTCTGGGGTCAAGAACACCACG
TTCAAGCGGTCAAAATGGAATACTGCACCCGTGCGACGTGCACCGACTAT
GACCCATTTGCTTGTTAGTTGCGAAGCAATTCGAGAATTATTCTTGGAAC
CTCGTGCCGGCAGGGGGGAGATTGTTCATGTTTGGCGTGCGGTGGATGTG
GTTGCATCGCTCGCACAAGACGAGCATGCCTCATCCAACCTATGCCCACC
CACTGCTGTCGAGAGAATCTTCGTCGAAAGCATCGGCGTCACGAACGGTA
GGACGGAGGGCCGTGGGTACAATGGGTCGATGGTGGTTGGTGGGTGGTGC
CCGAACTCATGGGCATGCATGAGCAGGGGCACCACCCATCAACCGCCATC
GACCCATCGTGCACACAGCCCCCTACCGTGCCGATCTTGTTGTGGAGGTT
TTGGACGTTGGTCCTCTCGAAAGTCTCGCTGCTGGCAGAAGCGATTCGCG
GCCACTGCCGAACAGTCTCCACAAAGCTCTCCGGTCATTGTCATAAGTTA
AGAGGCAAGACCGTTTTGCTTGGTTCTTCGAGTTCGATGGCCCCACCCAC
CTAGATGGAAAAAACAGACGTTAAAAGTATCTGAGCGAAAAGTATCTGAG
CGGCGACCGGAATGGTTTCAACATCATGACAACAACAACAACTGCTGTAC
CCCCCCCCCCCCCCCCCCCCTCCCCAGGGGTACGTGGACCCTGACGAGGC
CCCGATGAAGAAGATCGGCAGCATTTTCGGCTGGAACAAGAAGAAGGAGG
AGAAGGCGGAGGCTGCACCCAAGTCCGCCGCCAAGAAGGGCGCCAAGGGA
AAGAAGCCCGCGCCGGCCACGGAGACCAAGCCGAAGAAGACCGGCTGGTG
GTAAAACAGACGCCTTATTTTGTTGACTTTGATGAGACTAAACAGACGGG
TTATTTTGGTCGACGATGACTGAAGAGATGGCTTGCTTTTGTGGACGAAG
ACTTTTCAACAGACGACTTATTTTTTGTCGACCGAGACTAAACAGACCGC
TTGTTTCGAATGTTTTAGTCGATTTATTGTTCGGGGCGATTTTTTAACTA
GCGGCGCCAGGGGGACATCCCCGAGTTTGAGCTCGGCGTTTTCCGGGTGG
CGTGTGGCCAGCAGGTGCTGCTTGCGCGCTCTTGTTTTGGGTGCTTTTTC
GTCGAATTGTGACGCTTGGATCGCAAGGCGGGTGGGAGGGGAGGGGGGGG
TCGAAGCACCCCCCACGAGCTTGTCTCGGTCGGGGCCTTCTTTTTTTCCC
TCCTGCTGTGGGTTGAAAGTCGCGGCAACACCCTGCCCGTATTGATTGTT
ATTTGATCGAAACTCAGCTGGAGCATCTCCCGTTGTGTCGAGTTTACTCT
CGGGTGGCTCTCATGATATCTTCGTTTGGTAGCTACGCTTGTTTCCCTCT
GTCGCACGGCCTGTGGTGCGGTGAGGTGTTGACCTTGCGCAGAGGCCGCG
CGTGACCCCGTGGCATGCGGGGAGAGGAAGCATGTACCATAGCGGTATGG
ACGCGTTAGAGCGTGGAAAACATCAGAACCGCCCGAGGCCATTAGGTGGA
ATCAGAACGTTGATTGCGTCTTGGCTAGTGAGTACATAGGAGTGTCGAGA
GAGAGAGGATCTCCTGATCGCGAGGCGTGCCATGTGTGTACATAGAAGAA
AAAGGGTTGTATGCATACGGTAACTGTACTGGGCGCTCGTTCTCCGTGAA
TGTGCGCCAATGAGGCTCATCTAGTTCGTGGGCGTTTCGGCTGTGTTGTG
TTTTGTGTGTCGCTGTAAGAATGGCGGGCGGTGACACATCGCGAAGAAGA
CCATGATCCCGAGTAGATGAATAAAAGAAACCAACGAAATTGCTCCTCTT
GCCTTACGATGCCAGTCCACAACAGAGGGTTGCGGACAATGTCGATATCT
GCTGGGGCCTGCAATCGCTGAGGCAAGGGGGACGCGCTCGCCCCCTCTCA
TGTCTCCGAAACTAAAACGGCCGAAGAGAGATAAGCGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1357:12427..17564+

>mRNA_E-fasciculatus_F_contig1357.2657.1 ID=mRNA_E-fasciculatus_F_contig1357.2657.1|Name=mRNA_E-fasciculatus_F_contig1357.2657.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1410bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1357:12427..17564+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAAGGTAGCAGCTCTAGCACTAGTGGCGACTGGCACGGCTTCGGCCGC
GCAGCAGCAGCCATGCTTCGTCCCATCAGTCGGAGGCGGTCTCCGGCCAG
CTGCAAGGACGACGAGCAGCAGCAGCGTGCAGATGAAGCTTTGGGATTTC
GGGCTCAACCGCGAGATGAAGGTAGCAGCTCTAGCACTAGTGGCGACTGG
CACGGCTTCGGCCGCGCAGCAGCAGCCATGCTTCGTCCCATCAGTCGGAG
GCGGTCTCCGGCCAGCTGCAAGGACGACGAGCAGCAGCAGCGTGCAGATG
AAGCTTTGGGATTTCGGGCTCAACCGCGAGGCGATCACAGGACCATCACA
GGTGGACGAGAACTGGAAGGCTCAGCAAGAAATGCTCAAGCGACGAAAGC
GATCACAGGACCATCACAGGTGGACGAGAACTGGAAGGCTCAGCAAGAAA
TGCTCAAGCGACGAAACAACAAGGGCACCATGGACAAGTACAAGTCCAAG
GTCAACGAGAAGAGGGCACAAGCCGACGCGAAGCAACAAGGGCACCATGG
ACAAGTACAAGTCCAAGGTCAACGAGAAGAGGGCACAAGCCGACGCGAAG
GCGAACAAGTGGAAGTGGCAGACCGCCAAGTCCAGCTCGGACCCGCTCGT
GGCGTGGAAGAAGATGAAGAAAGAGGGCAAGATCGACGAGATTTACGACG
CGAACAAGTGGAAGTGGCAGACCGCCAAGTCCAGCTCGGACCCGCTCGTG
GCGTGGAAGAAGATGAAGAAAGAGGGCAAGATCGACGAGATTTACGACGA
GGATGAGAACGAAGAAGGCGGTATCCCGATCCCGATGGCCAGCTTCGGGG
TGGGAGGCAGCTTCGGCGTCGGCGGAAAGTGGGACGAGGGCGGACGGTTC
GACCTCCGACTTCCCTACGCCGACCAGGAGGATGAGAACGAAGAAGGCGG
TATCCCGATCCCGATGGCCAGCTTCGGGGTGGGAGGCAGCTTCGGCGTCG
GCGGAAAGTGGGACGAGGGCGGACGGTTCGACCTCCGACTTCCCTACGCC
GACCAGGGGTACGTGGACCCTGACGAGGCCCCGATGAAGAAGATCGGCAG
CATTTTCGGCTGGAACAAGAAGAAGGAGGAGAAGGCGGAGGCTGCACCCA
AGTCCGCCGCCAAGAAGGGCGCCAAGGGAAAGAAGCCCGCGCCGGCCACG
GAGACCAAGCCGAAGAAGACCGGCTGGTGGTAAGGGTACGTGGACCCTGA
CGAGGCCCCGATGAAGAAGATCGGCAGCATTTTCGGCTGGAACAAGAAGA
AGGAGGAGAAGGCGGAGGCTGCACCCAAGTCCGCCGCCAAGAAGGGCGCC
AAGGGAAAGAAGCCCGCGCCGGCCACGGAGACCAAGCCGAAGAAGACCGG
CTGGTGGTAA
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