prot_E-fasciculatus_F_contig1356.2648.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1356.2648.1
Unique Nameprot_E-fasciculatus_F_contig1356.2648.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length375
Homology
BLAST of mRNA_E-fasciculatus_F_contig1356.2648.1 vs. uniprot
Match: A0A6H5JHQ3_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ3_9PHAE)

HSP 1 Score: 466 bits (1198), Expect = 3.490e-154
Identity = 269/376 (71.54%), Postives = 288/376 (76.60%), Query Frame = 0
Query:    1 MASSPSIYHQGKHSLFTQRFRKIDAIRNALRTAVTEELAQQTQEKRRETYRVNAENKRRSA-AAAAALDTKTDTSGSLPGSNSVGDGHGPEVSIAVPCRLGCDGAARKKTRSASSSSFGNSGGRAVSRPHDRQGEPLSTAACVKIASADPDKAFGLRVDSGDAPRGEEEGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFTESQSAFASAGAKGGGGAKAGVRFFEDILRLGPKGTRPNAVGGALPNSKRKPHPRVRGGCKGEASRTQANKKPRQGTGAVPGPFAGLSLCVVHLGSVTSNTVKAFKRGVCDGGGQVATRFMPADTTHIVADPSLAASWEKLDNYFSGRGGIDDLDGTVGGGGVGLKRG 375
            MASSPS+YHQGKH+ FTQRFRKIDAIR ALRTAV EELAQQT+E+RRET+RVNAENKRRSA AAAAALD KTD+SG  PG +S  DG+G EVSI+VPCRLGCDG A  +TRSA     G+SGGRAVSRP DR  E LSTAACVK ASA PDKAFG RVDSGD P GE+EGAS                                  V TESQS  ASAGAKGGG AK GVRF EDILRLGPKG+R N  GGALPN KRK HPR RGGCKGEASRTQ +KKPRQGTGAV GPF+GLSLCVVHLGSVT+NT+K FKRGVCDGGG V+ RF P DTTHIVAD SLAASWEKLDNYFSG GG+DDLD  V GG VGLK G
Sbjct:    1 MASSPSVYHQGKHNPFTQRFRKIDAIRTALRTAVAEELAQQTEERRRETHRVNAENKRRSATAAAAALDGKTDSSGIFPGRDS--DGYGSEVSISVPCRLGCDGTA-SRTRSA-----GSSGGRAVSRPRDRLVELLSTAACVKQASASPDKAFGWRVDSGDGPEGEQEGASGVASTCGGRRDGHDRGPTPPPAAAS---------VSTESQSVLASAGAKGGG-AKTGVRFLEDILRLGPKGSRSNDAGGALPNPKRKSHPR-RGGCKGEASRTQTHKKPRQGTGAVSGPFSGLSLCVVHLGSVTNNTIKTFKRGVCDGGGHVSMRFTPGDTTHIVADASLAASWEKLDNYFSGWGGVDDLDDAVNGGRVGLKSG 357          
BLAST of mRNA_E-fasciculatus_F_contig1356.2648.1 vs. uniprot
Match: D7G2F7_ECTSI (DNA polymerase lambda n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F7_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.500e-33
Identity = 75/133 (56.39%), Postives = 91/133 (68.42%), Query Frame = 0
Query:  229 VRFFEDILRLGPKGTRPNAVGGALPNSKRKPHPRVRGGCKGEASRTQANKKPRQGTGAVPGPFAGLSLCVVHLGSVTSNTVKAFKRGVCDGGGQVATRFMPADTTHIVADPSLAASWEKLDNYFSGRGGIDDL 361
            +R+ ED+L   PKG+R NAV  A P+ KRK  PR  GG  G+    + NK+P +  GA  GPF+GLSLCVV  GSVT+NTV    R   DGGGQV+T + P DTTHIVAD SLAASWEKLD+YFSG    +D+
Sbjct:    3 IRYLEDLLCSAPKGSRSNAV--AAPSPKRKNRPR--GGASGDNGGIETNKRPWKRAGAASGPFSGLSLCVVSQGSVTNNTVGTLTREFRDGGGQVSTHYTPGDTTHIVADASLAASWEKLDDYFSGWDDFEDV 131          
BLAST of mRNA_E-fasciculatus_F_contig1356.2648.1 vs. uniprot
Match: A0A6H5JQ91_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ91_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 4.740e-33
Identity = 76/133 (57.14%), Postives = 89/133 (66.92%), Query Frame = 0
Query:  229 VRFFEDILRLGPKGTRPNAVGGALPNSKRKPHPRVRGGCKGEASRTQANKKPRQGTGAVPGPFAGLSLCVVHLGSVTSNTVKAFKRGVCDGGGQVATRFMPADTTHIVADPSLAASWEKLDNYFSGRGGIDDL 361
            +R  ED+L  GPKG+R NAV  A PN KRK  PR  GG  G+    +  K+P +  GA  GPF+GLSLCVV LGSVT+NTV    R   DGGGQV+T + P DTTHIVAD SLAASWEK D YFSG    +D+
Sbjct:    3 IRDLEDLLCSGPKGSRSNAV--AAPNPKRKTRPR--GGAGGDNGGIKTKKRPWKRAGAASGPFSGLSLCVVRLGSVTNNTVGTLPREFRDGGGQVSTHYTPGDTTHIVADASLAASWEKFDLYFSGWDDFEDV 131          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1356.2648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JHQ3_9PHAE3.490e-15471.54DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7G2F7_ECTSI1.500e-3356.39DNA polymerase lambda n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JQ91_9PHAE4.740e-3357.14DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1356contigE-fasciculatus_F_contig1356:11227..12351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1356.2648.1mRNA_E-fasciculatus_F_contig1356.2648.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1356 10978..12351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1356.2648.1 ID=prot_E-fasciculatus_F_contig1356.2648.1|Name=mRNA_E-fasciculatus_F_contig1356.2648.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=375bp
MASSPSIYHQGKHSLFTQRFRKIDAIRNALRTAVTEELAQQTQEKRRETY
RVNAENKRRSAAAAAALDTKTDTSGSLPGSNSVGDGHGPEVSIAVPCRLG
CDGAARKKTRSASSSSFGNSGGRAVSRPHDRQGEPLSTAACVKIASADPD
KAFGLRVDSGDAPRGEEEGASGAASTSGGRRDDDDDHGPTPPTAAAAAAA
AAAASVFTESQSAFASAGAKGGGGAKAGVRFFEDILRLGPKGTRPNAVGG
ALPNSKRKPHPRVRGGCKGEASRTQANKKPRQGTGAVPGPFAGLSLCVVH
LGSVTSNTVKAFKRGVCDGGGQVATRFMPADTTHIVADPSLAASWEKLDN
YFSGRGGIDDLDGTVGGGGVGLKRG
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