prot_E-fasciculatus_F_contig1352.2620.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1352.2620.1
Unique Nameprot_E-fasciculatus_F_contig1352.2620.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length39
Homology
BLAST of mRNA_E-fasciculatus_F_contig1352.2620.1 vs. uniprot
Match: D7FWP4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP4_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 4.070e-17
Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 0
Query:    2 MVNVPKERRTYCKDKKCCKHTVHKVTQYKSGKASNFAQ 39
            MVNVPKERRTYCKDK+C KHTVHKVTQYKSGKASNFAQ
Sbjct:   35 MVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQ 72          
BLAST of mRNA_E-fasciculatus_F_contig1352.2620.1 vs. uniprot
Match: A0A7S3NIT2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIT2_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.940e-16
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    2 MVNVPKERRTYCKDKKCCKHTVHKVTQYKSGKASNFAQ 39
            MVNVPKERRTYCK KKC KHTVHKVTQYK+GKASNFAQ
Sbjct:    1 MVNVPKERRTYCKGKKCKKHTVHKVTQYKAGKASNFAQ 38          
BLAST of mRNA_E-fasciculatus_F_contig1352.2620.1 vs. uniprot
Match: A0A835YP36_9STRA (Zinc-binding ribosomal protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP36_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.000e-16
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    2 MVNVPKERRTYCKDKKCCKHTVHKVTQYKSGKASNFAQ 39
            MVNVPKERRTYCK KKC KHTVHKV+QYKSGKASNFAQ
Sbjct:    1 MVNVPKERRTYCKSKKCGKHTVHKVSQYKSGKASNFAQ 38          
BLAST of mRNA_E-fasciculatus_F_contig1352.2620.1 vs. uniprot
Match: A0A7S3LII2_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LII2_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.150e-15
Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    2 MVNVPKERRTYCKDKKCCKHTVHKVTQYKSGKASNFAQ 39
            MVNVPKERRT+CK KKC KHT+HKVTQYK+GKASNFAQ
Sbjct:    1 MVNVPKERRTFCKGKKCLKHTMHKVTQYKAGKASNFAQ 38          
BLAST of mRNA_E-fasciculatus_F_contig1352.2620.1 vs. uniprot
Match: A0A812MGG9_SYMMI (RIM-C protein n=3 Tax=cellular organisms TaxID=131567 RepID=A0A812MGG9_SYMMI)

HSP 1 Score: 72.0 bits (175), Expect = 2.190e-15
Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    2 MVNVPKERRTYCKDKKCCKHTVHKVTQYKSGKASNFAQ 39
            MVNVPKER+T+CK KKC KHT+HKVTQYKSGKASNFAQ
Sbjct:    1 MVNVPKERKTFCKGKKCGKHTLHKVTQYKSGKASNFAQ 38          
BLAST of mRNA_E-fasciculatus_F_contig1352.2620.1 vs. uniprot
Match: A0A7S2UXA0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXA0_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.310e-15
Identity = 33/38 (86.84%), Postives = 35/38 (92.11%), Query Frame = 0
Query:    2 MVNVPKERRTYCKDKKCCKHTVHKVTQYKSGKASNFAQ 39
            MVNVPKERRTYCK K C KHT+HKVTQYK+GKASNFAQ
Sbjct:    1 MVNVPKERRTYCKAKNCNKHTIHKVTQYKAGKASNFAQ 38          
BLAST of mRNA_E-fasciculatus_F_contig1352.2620.1 vs. uniprot
Match: I6ZGD0_9STRA (Ribosomal protein L44 n=1 Tax=Aurantiochytrium sp. KRS101 TaxID=797128 RepID=I6ZGD0_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 3.280e-15
Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    2 MVNVPKERRTYCKDKKCCKHTVHKVTQYKSGKASNFAQ 39
            MVNVPKERRT+CK K+C KHTVHKVTQYK+GKASNFAQ
Sbjct:    1 MVNVPKERRTFCKGKQCRKHTVHKVTQYKAGKASNFAQ 38          
BLAST of mRNA_E-fasciculatus_F_contig1352.2620.1 vs. uniprot
Match: F0YGF9_AURAN (RL44_PICJA 60S ribosomal protein L44 n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YGF9_AURAN)

HSP 1 Score: 71.6 bits (174), Expect = 3.280e-15
Identity = 33/38 (86.84%), Postives = 35/38 (92.11%), Query Frame = 0
Query:    2 MVNVPKERRTYCKDKKCCKHTVHKVTQYKSGKASNFAQ 39
            MVNVPKER+TYCK KKC KHT HKVTQYK+GKASNFAQ
Sbjct:    1 MVNVPKERKTYCKAKKCRKHTTHKVTQYKAGKASNFAQ 38          
BLAST of mRNA_E-fasciculatus_F_contig1352.2620.1 vs. uniprot
Match: A0A7S1TR78_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TR78_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 8.470e-15
Identity = 33/38 (86.84%), Postives = 35/38 (92.11%), Query Frame = 0
Query:    2 MVNVPKERRTYCKDKKCCKHTVHKVTQYKSGKASNFAQ 39
            MVNVPKERR+YCK+KKC  H VHKVTQYKSGKASNFAQ
Sbjct:   11 MVNVPKERRSYCKNKKCKNHQVHKVTQYKSGKASNFAQ 48          
BLAST of mRNA_E-fasciculatus_F_contig1352.2620.1 vs. uniprot
Match: A0A485LSL1_9STRA (Aste57867_25253 protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LSL1_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 9.360e-15
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0
Query:    2 MVNVPKERRTYCKDKKCCKHTVHKVTQYKSGKASNFAQ 39
            MVN+PKERRT+CK KKC KHTVHKVTQYK+GKAS FAQ
Sbjct:    1 MVNIPKERRTFCKGKKCRKHTVHKVTQYKAGKASKFAQ 38          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1352.2620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWP4_ECTSI4.070e-1794.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3NIT2_9STRA1.940e-1692.11Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A835YP36_9STRA2.000e-1692.11Zinc-binding ribosomal protein n=1 Tax=Tribonema m... [more]
A0A7S3LII2_9STRA1.150e-1586.84Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A812MGG9_SYMMI2.190e-1586.84RIM-C protein n=3 Tax=cellular organisms TaxID=131... [more]
A0A7S2UXA0_9STRA2.310e-1586.84Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
I6ZGD0_9STRA3.280e-1586.84Ribosomal protein L44 n=1 Tax=Aurantiochytrium sp.... [more]
F0YGF9_AURAN3.280e-1586.84RL44_PICJA 60S ribosomal protein L44 n=2 Tax=Pelag... [more]
A0A7S1TR78_9STRA8.470e-1586.84Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A485LSL1_9STRA9.360e-1584.21Aste57867_25253 protein n=7 Tax=Saprolegniaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.80coord: 2..39
e-value: 4.0E-15
score: 58.1
NoneNo IPR availablePRODOMPD002841coord: 11..39
e-value: 3.0E-6
score: 115.0
IPR000552Ribosomal protein L44ePANTHERPTHR1036960S RIBOSOMAL PROTEIN L36A/L44coord: 1..39
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 3..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1352contigE-fasciculatus_F_contig1352:343..1455 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1352.2620.1mRNA_E-fasciculatus_F_contig1352.2620.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1352 343..1640 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1352.2620.1 ID=prot_E-fasciculatus_F_contig1352.2620.1|Name=mRNA_E-fasciculatus_F_contig1352.2620.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=39bp
MMVNVPKERRTYCKDKKCCKHTVHKVTQYKSGKASNFAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011332Ribosomal_zn-bd
IPR000552Ribosomal_L44e