mRNA_E-fasciculatus_F_contig13481.2603.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13481.2603.1
Unique NamemRNA_E-fasciculatus_F_contig13481.2603.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13481.2603.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 518 bits (1333), Expect = 9.990e-177
Identity = 283/339 (83.48%), Postives = 285/339 (84.07%), Query Frame = 1 
Query:    7 RWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWIITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNATEPEEMQVLELSLAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAQLENGSATLRKKAEEDLKAVIAQFDVQPSEPAPAPAPVLNV----------------------------------------------------LVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEATSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVD 867
            RWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEW ITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNATEPEEMQVLELS AAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGA+LENGSATLRKKAEEDLKAVIAQFDVQPSEPAPAPAPVLNV                                                    LVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEA+SCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVD
Sbjct:  457 RWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNATEPEEMQVLELSSAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAKLENGSATLRKKAEEDLKAVIAQFDVQPSEPAPAPAPVLNVDPVEPASKRKKLSRLEERRAARVAAASDGGASGSVQAQGSATNRRVLIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVD 795
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13481.2603.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 384 bits (986), Expect = 9.140e-127
Identity = 220/348 (63.22%), Postives = 246/348 (70.69%), Query Frame = 1 
Query:    7 RWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWIITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNAT----EPE-----EMQVLELSLAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAQLENGSATLRKKAEEDLKAVIAQFDVQPSEPAPAPAPVLN-----------------------------------------------------VLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEATSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLV 864
            RWTSQFKMMDR+LALKKPI+EYF++ P N RKLT  EW ITNEVCSLLSDVSEVTIRMQG+ DTH+ QAMFI+HE++EML ED+HPIR  NAT     PE     + QV++L+  AQ VLEVL + M EK VG A   VERLSALMDPR +SLD  QLENGSA LRKKAE+DLKAVIA+FDV P+  APAPAPV+N                                                     VLVYLAE  Q++VD FNVLG+WNRRGTDSV +TTG VTSPAEMPYLAFIARL+LGIEATSCQAERNFSAL+HLIG LRCNML  KVERMM IRLNRHLV
Sbjct:  264 RWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGVGSAQVAVERLSALMDPRLRSLDSDQLENGSADLRKKAEDDLKAVIAKFDVGPATAAPAPAPVMNLDRVEPAPKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLV 611
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13481.2603.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 387 bits (993), Expect = 1.380e-125
Identity = 221/348 (63.51%), Postives = 247/348 (70.98%), Query Frame = 1 
Query:    7 RWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWIITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNAT----EPE-----EMQVLELSLAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAQLENGSATLRKKAEEDLKAVIAQFDVQPSEPAPAPAPVLN-----------------------------------------------------VLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEATSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLV 864
            RWTSQFKMMDR+LALKKPI+EYF++ P N RKLT  EW ITNEVCSLLSDVSEVTIRMQG+ DTH+ QAMFI+HE++EML ED+HPIR  NAT     PE     + QV++L+  AQ VLEVL + M EK +G A   VERLSALMDPRRKSLD  QLENGSA LRKKAE+DLKAVIA+FDV P+  APAPAPV+N                                                     VLVYLAE  Q++VD FNVLG+WNRRGTDSV +TTG VTSPAEMPYLAFIARL+LGIEATSCQAERNFSAL+HLIG LRCNML  KVERMM IRLNRHLV
Sbjct:  459 RWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGMGSAQVAVERLSALMDPRRKSLDSDQLENGSADLRKKAEDDLKAVIAKFDVGPATAAPAPAPVMNLDPVEPAPKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLV 806
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13481.2603.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 6.700e-115
Identity = 209/367 (56.95%), Postives = 239/367 (65.12%), Query Frame = 1 
Query:   13 TSQFKMMDRLLALKKPITEYFREQPHN------SRKLTQPEWIITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNA-------------TEPEEMQ------------VLELSLAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAQLENGSATLRKKAEEDLKAVIAQFDVQPSEPAPAPAPVLNV----------------------------------------------------LVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEATSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLV 864
            TSQFKMM RLL LKKPI+EYFR  P         RKL+  EWI+TNEVCSLL DVSE+TIR+QGA+DTHISQAMF+IHEVMEML++++HPIR  NA             TE EE Q            V +L+  AQGV +VLL+VMEEK VGKA+Q+VERLSAL+DPRRK LD  Q+ NG   LR  AE DLK  IA F  +   P PAPAPV++V                                                    LVYLAE  QV+VD FN++GFWNRRGT+SVC TTG VT+PAEMPYLAFIARL LGIEATSCQAERNFSAL+HLIG LRCNML+RKVERMMLIRLNRHL+
Sbjct:  123 TSQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTANAIVTPPPPALDVIPTEEEENQPQKGGVSTEDIHVEDLTTEAQGVRKVLLEVMEEKGVGKALQRVERLSALLDPRRKDLDATQVGNGDEDLRIAAEADLKKFIATFTAESVPPTPAPAPVVDVQPAEPALKKKKFSRIEEXXXXXXXXXXXXXXXXTVAPQTPVTGRHVLIEREVLVYLAEQPQVDVDGFNLVGFWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLL 489
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13481.2603.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 1.230e-102
Identity = 189/294 (64.29%), Postives = 208/294 (70.75%), Query Frame = 1 
Query:   10 WTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWIITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNATE---PEE------MQVLELSLAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAQLENGSATLRKKAEEDLKAVIAQFDVQPSEPAPAPAPVLNVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEATSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLV 864
            WTSQ KMMDR LALKKPI+E+F++ P N RKLT  EW I NEVCSLL+DVSE+TIR+QG+ DTHI QAMFIIHEV+EML ED+HPIR  NAT    PEE        V +L+  A  VLEVLLDVM +K VG A    ERLSALMDPRRK L   QLENGSA L KKAE+DLKAVIA+FDV PS  + A AP            +       V      RGT SV  TTG VTSPAEMPYLAFIARL+LGIEATSCQAERNFSA SHLIG LRC +L  K ER M IRLNRHLV
Sbjct:  110 WTSQLKMMDRALALKKPISEFFKKYPQNDRKLTPNEWTIINEVCSLLADVSEITIRVQGSVDTHIGQAMFIIHEVIEMLGEDTHPIRQPNATVVPVPEEGIPTDDTPVTDLTAEAPCVLEVLLDVMRKKGVGSAQVAAERLSALMDPRRKLLGSDQLENGSADLSKKAEDDLKAVIAKFDVGPSTESTA-APXXXXXXXXXXPAEPAPKRKTVSRL--ERGTSSVSPTTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSARSHLIGQLRCKILPSKFERTMFIRLNRHLV 400
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13481.2603.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 312 bits (799), Expect = 8.790e-99
Identity = 187/348 (53.74%), Postives = 221/348 (63.51%), Query Frame = 1 
Query:    7 RWTSQFKMMDRLLALKKPITEYFREQPHNS-------RKLTQPEWIITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNATEPEEMQVLELSLAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAQLENGSATLRKKAEEDLKAVIAQFDVQPSEPAPAPAPVLNV-------------------------------------------------------LVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEATSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLV 864
            RWTSQ KMM RLL LKKPI+EYFR     +       RKLT  EW +TNEVCSLL  VSEVTIRMQGA +TH+SQA FII+E       +     + +    EE QV  L+L AQ V++VL ++M+EK VGKA+Q+VERLS L+DPRRK+LD   L NGS+ L+ +AE DLKA   +F  + +   PAPAPV+NV                                                       LVYLAE  QV+VDDFN+LGFWNRRGTDSV + TG VTSPAEMPYLAFIARL LGIEATSCQAERNFSAL+HLIG L CNMLS +VERMML+RLN+HL+
Sbjct:  266 RWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATETHLSQATFIINEG------EGQNESSLDGISTEETQVTGLTLEAQDVVQVLREMMDEKGVGKALQRVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFTGKFAQESAPSTPAPAPVVNVDTAEPARKKKXPTSRLEXXXXXXXXXXXXXXXXXXGTTDPQAAGTGRRVLIEREMLVYLAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLL 607
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13481.2603.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 9.760e-97
Identity = 188/355 (52.96%), Postives = 217/355 (61.13%), Query Frame = 1 
Query:    7 RWTSQFKMMDRLLALKKPITEYFREQPHNS-------RKLTQPEWIITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNA-------------TEPE-------------EMQVLELSLAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAQLENGSATLRKKAEEDLKAVIAQFDVQPSEPAPAPAPVLNV-------------------------------------------------------LVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEATSCQAERNFSALSHLIGHLRCN 807
            RWTSQ KMM RLL LKKPI+EYFR     +       RKLT  EW +TNEVCSLL  VSEVTIRMQGA DTH+SQA FII+EV++ML  D HPIR ++A             TE E             E QV +L+L AQ V++VLL+VM+EK VGKA+Q VERLS L+DPRRK+LD   L NGS+ L+ +AE DLKA I +F  + +   PAPAPV+NV                                                       LVYLAE  QV+VDDFN LGFWNRRGTDSV + TG V+SPAEMPYLAFIARL LGIEATSCQAERNFSAL+HLIG LRCN
Sbjct:  266 RWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATDTHLSQATFIINEVIDMLTTDYHPIRVESAIVTPPPPAAGIIPTEGEGQNESSLDGISTAETQVTDLTLEAQDVVQVLLEVMDEKGVGKALQWVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFIGKFAQESAPSTPAPAPVVNVDTAEPARKKXXXTSRLXXXXXXXXXXXXXXXXXXXXXTDPKAAGAGRRVLIEREMLVYLAEQPQVDVDDFNPLGFWNRRGTDSVSAATGKVSSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLRCN 620
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13481.2603.1 vs. uniprot
Match: A0A6H5KFJ9_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ9_9PHAE)

HSP 1 Score: 268 bits (685), Expect = 3.240e-79
Identity = 162/269 (60.22%), Postives = 180/269 (66.91%), Query Frame = 1 
Query:  154 DVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNAT---------EPEEMQVLELSLAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAQLENGSATLRKKAEEDLKAVIAQFDVQPSEPAPAPAPVLNV----------------------------------------------------LVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEATSCQAERNFSAL 777
            D+   TIRMQGA+DTHISQA+ IIH VMEMLREDSHPIRA+NAT           +EM+V +LSL AQ VLEVLL+VM EKQV KAVQQVERLSALMDPRRKSL+G QLENGSA LRK+AEEDLKAVIAQFDVQPSEPA APAPVLNV                                                    LVYLAE EQV+VD+F VLG W+RRGTDSVC+TTG VTSP EMPYLAFIARL+LGIEA   + +   + L
Sbjct:  473 DIFGATIRMQGAEDTHISQAIVIIHVVMEMLREDSHPIRAKNATVMPPPPDGIPTDEMEVTDLSLEAQEVLEVLLEVMGEKQVEKAVQQVERLSALMDPRRKSLNGEQLENGSAHLRKRAEEDLKAVIAQFDVQPSEPASAPAPVLNVDPVEPAPKRKKLSRLEERRGARVAAASGVGASGSVQAQGSATNRRVLIERDVLVYLAEKEQVDVDEFKVLGSWSRRGTDSVCATTGQVTSPTEMPYLAFIARLYLGIEALGGRGDNQDTPL 741
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13481.2603.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 9.870e-79
Identity = 159/293 (54.27%), Postives = 185/293 (63.14%), Query Frame = 1 
Query:   10 WTSQFKMMDRLLALKKPITEYFR----EQPHNS---RKLTQPEWIITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNATEPEEMQVLELSLAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAQLENGSATLRKKAEEDLKAVIAQFDVQPSEPAPAPAPVLNVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEATSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVD 867
            WTSQF+MM RLL L K I EYFR    + P +    RKLT  EW +TNEVCSLL  VSE TIRMQGA DTHISQA FI+HEVMEML+EDSHPIR +NA      Q   L LA            EE+Q  +A        +L+D                     + ED +A +    V              +LVYLAE  Q++VD FN++GFWNRRGTDSV + TG VTSPA+MPYLAFIARL LGIEATSCQAERNFSAL+HLIG+LRCNML  +VERMMLIRLNR ++D
Sbjct:  260 WTSQFRMMVRLLILNKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMEMLKEDSHPIRVENAMVTPPPQAPGLILAE-----------EEEQQHQA--------SLVDI--------------------STEDTQAGVTGRRVLIER---------EMLVYLAEQPQLDVDGFNLIGFWNRRGTDSVRAATGQVTSPADMPYLAFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNRRMLD 504
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13481.2603.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 2.870e-71
Identity = 129/183 (70.49%), Postives = 131/183 (71.58%), Query Frame = 1 
Query:  475 RKKAEEDLKAVIAQFDVQPSEPAPAPAPVLNV----------------------------------------------------LVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEATSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVD 867
            +KKAEEDLKAVIAQFDVQPSEPAPAPAPVLNV                                                    LVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEA+SCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVD
Sbjct:   48 KKKAEEDLKAVIAQFDVQPSEPAPAPAPVLNVDPVEPASKRKKLSRLEERRAARVAAASDGGASGSVQAQGSATNRRVLIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVD 230
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13481.2603.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JRT6_9PHAE9.990e-17783.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTB8_9PHAE9.140e-12763.22Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JGG8_9PHAE1.380e-12563.51Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec... [more]
A0A6H5KDJ6_9PHAE6.700e-11556.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAS2_9PHAE1.230e-10264.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQI6_9PHAE8.790e-9953.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZU3_9PHAE9.760e-9752.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFJ9_9PHAE3.240e-7960.22Fanconi-associated nuclease n=1 Tax=Ectocarpus sp.... [more]
A0A6H5JXV5_9PHAE9.870e-7954.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJT6_9PHAE2.870e-7170.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13481contigE-fasciculatus_F_contig13481:2258..3280 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size867
Cds size867
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927847.374481-CDS-E-fasciculatus_F_contig13481:2257..28241622927847.374481-CDS-E-fasciculatus_F_contig13481:2257..2824Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13481 2258..2824 +
1695995721.0037916-CDS-E-fasciculatus_F_contig13481:2257..28241695995721.0037916-CDS-E-fasciculatus_F_contig13481:2257..2824Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13481 2258..2824 +
1622927847.3905659-CDS-E-fasciculatus_F_contig13481:2980..32801622927847.3905659-CDS-E-fasciculatus_F_contig13481:2980..3280Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13481 2981..3280 +
1695995721.0131297-CDS-E-fasciculatus_F_contig13481:2980..32801695995721.0131297-CDS-E-fasciculatus_F_contig13481:2980..3280Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13481 2981..3280 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13481.2603.1prot_E-fasciculatus_F_contig13481.2603.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13481 2258..3280 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13481.2603.1

>prot_E-fasciculatus_F_contig13481.2603.1 ID=prot_E-fasciculatus_F_contig13481.2603.1|Name=mRNA_E-fasciculatus_F_contig13481.2603.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=289bp
MIRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWIITNEVCSLL
SDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNATEPEEM
QVLELSLAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAQ
LENGSATLRKKAEEDLKAVIAQFDVQPSEPAPAPAPVLNVLVYLAETEQV
EVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEATSC
QAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVD
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mRNA from alignment at E-fasciculatus_F_contig13481:2258..3280+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13481.2603.1 ID=mRNA_E-fasciculatus_F_contig13481.2603.1|Name=mRNA_E-fasciculatus_F_contig13481.2603.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1023bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13481:2258..3280+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGATAAGGTGGACCAGCCAGTTCAAGATGATGGATCGCCTTCTAGCCTT
GAAGAAGCCTATCACCGAGTACTTCCGAGAGCAACCCCACAACTCGCGAA
AGCTGACACAACCTGAGTGGATCATCACCAACGAGGTGTGCAGCCTCCTG
AGCGACGTCTCCGAGGTCACGATTCGGATGCAAGGGGCCAAGGACACCCA
CATCAGCCAGGCGATGTTCATCATTCATGAGGTGATGGAGATGCTGAGGG
AGGACAGCCACCCGATCCGGGCGCAGAACGCCACCGAACCGGAAGAGATG
CAGGTGCTGGAGCTTTCCTTGGCGGCGCAGGGGGTGTTAGAGGTGCTGCT
GGACGTGATGGAAGAGAAGCAGGTGGGGAAGGCTGTGCAGCAGGTGGAGC
GGCTGTCCGCGTTGATGGACCCAAGGCGGAAGTCGCTTGACGGCGCACAA
CTCGAAAATGGTTCTGCGACTCTCAGGAAGAAGGCTGAAGAGGACTTGAA
GGCGGTCATCGCCCAGTTCGACGTGCAGCCGTCCGAGCCTGCACCGGCGC
CAGCGCCAGTGCTCAACGTGGACCCGGTGGAACCCGCATCCAAGAGGAAG
AAGGTTTCGAGATTGGAGGAACGGCGCGCGGCACGTGTGGCGGCAGCCAG
CGGTGGTGGTGCGAGCGGTTCGGTCCAGGCTCAGGGTTCCGCCACGAACC
GGCGCGTGCTGATCGAGCGAGAGGTATTGGTGTACTTGGCGGAGACGGAA
CAGGTGGAGGTGGATGACTTCAACGTCCTGGGGTTTTGGAATCGGCGGGG
CACTGACAGCGTATGCTCGACGACTGGCAACGTCACATCCCCGGCAGAAA
TGCCCTACCTAGCGTTCATCGCTCGGTTGTTCCTCGGGATCGAGGCGACC
AGCTGTCAGGCCGAGCGGAACTTCTCGGCGCTCAGCCACCTGATCGGCCA
CCTGCGCTGCAACATGCTCTCACGGAAGGTTGAGCGCATGATGTTGATTC
GGCTCAACAGGCACTTGGTGGAC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13481:2258..3280+

>mRNA_E-fasciculatus_F_contig13481.2603.1 ID=mRNA_E-fasciculatus_F_contig13481.2603.1|Name=mRNA_E-fasciculatus_F_contig13481.2603.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1734bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13481:2258..3280+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGATAAGGTGGACCAGCCAGTTCAAGATGATGGATCGCCTTCTAGCCTT
GAAGAAGCCTATCACCGAGTACTTCCGAGAGCAACCCCACAACTCGCGAA
AGCTGACACAACCTGAGTGGATCATCACCAACGAGGTGTGCAGCCTCCTG
AGCGACGTCTCCGAGGTCACGATTCGGATGCAAGGGGCCAAGGACACCCA
CATCAGCCAGGCGATGTTCATCATTCATGAGGTGATGGAGATGCTGAGGG
AGGACAGCCACCCGATCCGGGCGCAGAACGCCACCGAACCGGAAGAGATG
CAGGTGCTGGAGCTTTCCTTGGCGGCGCAGGGGGTGTTAGAGGTGCTGCT
GGACGTGATGGAAGAGAAGCAGGTGGGGAAGGCTGTGCAGCAGGTGGAGC
GGCTGTCCGCGTTGATGGACCCAAGGCGGAAGTCGCTTGACGGCGCACAA
CTCGAAAATGGTTCTGCGACTCTCAGGAAGAAGGCTGAAGAGGACTTGAA
GGCGGTCATCGCCCAGTTCGACGTGCAGCCGTCCGAGCCTGCACCGGCGC
CAGCGCCAGTGCTCAACATGATAAGGTGGACCAGCCAGTTCAAGATGATG
GATCGCCTTCTAGCCTTGAAGAAGCCTATCACCGAGTACTTCCGAGAGCA
ACCCCACAACTCGCGAAAGCTGACACAACCTGAGTGGATCATCACCAACG
AGGTGTGCAGCCTCCTGAGCGACGTCTCCGAGGTCACGATTCGGATGCAA
GGGGCCAAGGACACCCACATCAGCCAGGCGATGTTCATCATTCATGAGGT
GATGGAGATGCTGAGGGAGGACAGCCACCCGATCCGGGCGCAGAACGCCA
CCGAACCGGAAGAGATGCAGGTGCTGGAGCTTTCCTTGGCGGCGCAGGGG
GTGTTAGAGGTGCTGCTGGACGTGATGGAAGAGAAGCAGGTGGGGAAGGC
TGTGCAGCAGGTGGAGCGGCTGTCCGCGTTGATGGACCCAAGGCGGAAGT
CGCTTGACGGCGCACAACTCGAAAATGGTTCTGCGACTCTCAGGAAGAAG
GCTGAAGAGGACTTGAAGGCGGTCATCGCCCAGTTCGACGTGCAGCCGTC
CGAGCCTGCACCGGCGCCAGCGCCAGTGCTCAACGTATTGGTGTACTTGG
CGGAGACGGAACAGGTGGAGGTGGATGACTTCAACGTCCTGGGGTTTTGG
AATCGGCGGGGCACTGACAGCGTATGCTCGACGACTGGCAACGTCACATC
CCCGGCAGAAATGCCCTACCTAGCGTTCATCGCTCGGTTGTTCCTCGGGA
TCGAGGCGACCAGCTGTCAGGCCGAGCGGAACTTCTCGGCGCTCAGCCAC
CTGATCGGCCACCTGCGCTGCAACATGCTCTCACGGAAGGTTGAGCGCAT
GATGTTGATTCGGCTCAACAGGCACTTGGTGGACGTATTGGTGTACTTGG
CGGAGACGGAACAGGTGGAGGTGGATGACTTCAACGTCCTGGGGTTTTGG
AATCGGCGGGGCACTGACAGCGTATGCTCGACGACTGGCAACGTCACATC
CCCGGCAGAAATGCCCTACCTAGCGTTCATCGCTCGGTTGTTCCTCGGGA
TCGAGGCGACCAGCTGTCAGGCCGAGCGGAACTTCTCGGCGCTCAGCCAC
CTGATCGGCCACCTGCGCTGCAACATGCTCTCACGGAAGGTTGAGCGCAT
GATGTTGATTCGGCTCAACAGGCACTTGGTGGAC
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