mRNA_E-fasciculatus_F_contig1345.2588.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1345.2588.1 vs. uniprot
Match: D7FIC5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIC5_ECTSI) HSP 1 Score: 154 bits (390), Expect = 5.820e-37 Identity = 77/123 (62.60%), Postives = 91/123 (73.98%), Query Frame = 2
Query: 107 MNLLWTLLL-ASTTVAQGVHTCLDSDSDRCLPGSTSLDVRYCYMGDEDLEDLSLCLDNIGRSNIGTINLDDNYFTYIPEDLLAGLTNLEYIRLNHFPYITTFPEGLFEGLGSLLKISMRDNAL 472
M L W+LLL +TVA+GVH CL+SDS RC G+T +DVRYC +GDED EDLS CLD GRS I +NLDDN F PE L AGL+ + YIR+NH PY+T PEGLFE L +L KIS+RDNAL
Sbjct: 1 MILPWSLLLLVYSTVAEGVHPCLESDSGRCTFGTTDVDVRYCGLGDEDFEDLSRCLDTAGRSTITEVNLDDNDFVDFPEGLFAGLSAVTYIRINHLPYLTEVPEGLFENLATLEKISLRDNAL 123
BLAST of mRNA_E-fasciculatus_F_contig1345.2588.1 vs. uniprot
Match: D7FXK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK6_ECTSI) HSP 1 Score: 131 bits (329), Expect = 1.340e-28 Identity = 60/111 (54.05%), Postives = 77/111 (69.37%), Query Frame = 2
Query: 1028 PVPSNSNEHLGCYADGTALILLLGHGIINQDNMTPAVCRAHCESFGSPFYATQNGGECWCGESENVKDYQEHGEGACVMGCFGDPTVACGGQDSFSLFEYSGDVLKTAAPE 1360
P+PS+S E++GC+AD L + I QDNMT VCR +CE FGS FYATQ G ECWCG +++V++Y+ HG+G C+ GCFGDP +ACGG +FSLFEY D A E
Sbjct: 413 PMPSDSREYVGCFADDQE-DRALANKIKFQDNMTQDVCRVYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEYLDDDDDETATE 522
BLAST of mRNA_E-fasciculatus_F_contig1345.2588.1 vs. uniprot
Match: U4LCU3_PYROM (Similar to Putative fungistatic metabolite acc. no. P84675 n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4LCU3_PYROM) HSP 1 Score: 73.6 bits (179), Expect = 9.550e-10 Identity = 47/135 (34.81%), Postives = 70/135 (51.85%), Query Frame = 2
Query: 929 PTGTILMDSGAVLSSSCGTSLGTSTSETSDDAEPVPSN-SNEHLGCYADGTALILLLGHGIINQDNMTPAVCRAHCESFGSPFYATQNGGECWCGES--ENVKDYQEHGEGACVMGCFGDPTVACGGQDSFSLFE 1324
P+ T+++ SG S +S+ S+ +S D P+ + ++LGC +G L G + + DN+TPA+CRAHC S P T+ G EC+CG N E+ C + C GDP CGG + SL+E
Sbjct: 1135 PSSTVVLPSGPESSVPASSSVPASSVTSSVDPSATPTEPAFKYLGCATEGINGRALTGEPLYS-DNLTPAMCRAHCRSQNLPLSGTEYGRECYCGSKLENNATMTSEN----CNVPCAGDPASVCGGPSALSLYE 1264
BLAST of mRNA_E-fasciculatus_F_contig1345.2588.1 vs. uniprot
Match: D8LR92_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR92_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 7.020e-9 Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 2
Query: 161 HTCLDSDSDR--CLPGSTSLDVRYCYMGDEDLEDLSLCLDNIGRSNIGTINLDDNYFTYIPEDLLAGLTNLEYIRLNHFPYITTFPEGLFEGLGSLLKISMRDNAL 472
+ CLD S+ C T + + YC + D+DLED+ CLD +GR ++ + + NY T IPE L GL +LE + LN+ T F+ LG L +++ N+L
Sbjct: 179 NPCLDPASEAYLCSVNGTEIHLDYCGITDDDLEDVETCLDVLGRGSMTALYVRFNYLTTIPEGLFDGLGHLEKLYLNNNGLSETLSAESFQALGKLQVLNLNGNSL 284
BLAST of mRNA_E-fasciculatus_F_contig1345.2588.1 vs. uniprot
Match: D7FSS0_ECTSI (Hypothetical leucine rich repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSS0_ECTSI) HSP 1 Score: 66.2 bits (160), Expect = 7.090e-9 Identity = 38/100 (38.00%), Postives = 57/100 (57.00%), Query Frame = 2
Query: 161 HTCLDSDSDR--CLPGSTSLDVRYCYMGDEDLEDLSLCLDNIGRSNIGTINLDDNYFTYIP---EDLLAGLTNLEYIRLNHFPYITTFPEGLFEGLGSLL 445
++C D + D C PGST +D+ C +GDEDLEDL C +N+GR+++ I ++ N T +P L AG +L+ + L T + + FEGLG L
Sbjct: 38 NSCFDPEYDLYGCEPGSTQIDLDNCGIGDEDLEDLRECFENVGRASVTYIAMNSNSLTELPGGENGLFAGFESLKTLGLVQNNIKTLYADS-FEGLGGSL 136
BLAST of mRNA_E-fasciculatus_F_contig1345.2588.1 vs. uniprot
Match: UPI001EE50B92 (WSC domain-containing protein 2-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE50B92) HSP 1 Score: 60.8 bits (146), Expect = 9.350e-8 Identity = 30/91 (32.97%), Postives = 48/91 (52.75%), Query Frame = 2
Query: 1052 HLGCYADGTALILLLGHGIINQDNMTPAVCRAHCESFGSPFYATQNGGECWCGESENVKDYQEHGEGACVMGCFGDPTVACGGQDSFSLFE 1324
+LGCY D +L +I++ MT CR HC+ P++ T+ G EC+CG+ + + + E C M C GD + CGG S+++
Sbjct: 19 YLGCYVDTRENRVLPHSFMIDKTRMTTETCRLHCQRNHHPYFGTEYGTECYCGDVLRLGNRLKP-ETECSMPCAGDKSTVCGGPLRISVYK 108
BLAST of mRNA_E-fasciculatus_F_contig1345.2588.1 vs. uniprot
Match: D7FSS1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSS1_ECTSI) HSP 1 Score: 64.3 bits (155), Expect = 4.250e-7 Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 2
Query: 161 HTCLDSDSDR--CLPGSTSLDVRYCYMGDEDLEDLSLCLDNIGRSNIGTINLDDNYFTYIPEDLLAGLTNLEYIRLNH 388
++CLD ++D C GST +++ C +GDEDLEDL C DN+GR+++ I L N FT + L G N++ + L +
Sbjct: 36 NSCLDPENDLYGCEAGSTEINLSNCGIGDEDLEDLVECFDNVGRASVTAIWLGSNSFTSLAAGLFDGFDNIKSLSLGN 113
BLAST of mRNA_E-fasciculatus_F_contig1345.2588.1 vs. uniprot
Match: G2QCE2_MYCTT (Uncharacterized protein n=1 Tax=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) TaxID=573729 RepID=G2QCE2_MYCTT) HSP 1 Score: 61.6 bits (148), Expect = 4.770e-7 Identity = 32/90 (35.56%), Postives = 44/90 (48.89%), Query Frame = 2
Query: 1052 HLGCYADGTALILLLGHGIINQDNMTPAVCRAHCESFGSPFYATQNGGECWCGESENVKDYQEHGEGACVMGCFGDPTVACGGQDSFSLF 1321
+ GCY + A L G +I+ +NMT AVC AHC + + GGEC+CG + + C M C GD CGG + SL+
Sbjct: 19 YYGCYTEIPARALT-GSSLIDYENMTIAVCEAHCTGLDFDIWGVEYGGECYCGNALAQGSFPAFVTD-CAMPCPGDAATVCGGPNRLSLY 106
BLAST of mRNA_E-fasciculatus_F_contig1345.2588.1 vs. uniprot
Match: A0A8H8CNZ0_PSICU (WSC domain-containing protein n=2 Tax=Psilocybe cubensis TaxID=181762 RepID=A0A8H8CNZ0_PSICU) HSP 1 Score: 58.2 bits (139), Expect = 3.060e-6 Identity = 31/93 (33.33%), Postives = 50/93 (53.76%), Query Frame = 2
Query: 1055 LGCYADGT-ALILLLGHGIINQDNMTPAVCRAHCESFGSP--FYATQNGGECWCGESENVKDYQEHGEGACVMGCFGDPTVACGGQDSFSLFE 1324
+GC+ D A L H +I++ NMTPA+C C +F +P F T+ G +C+C + Q + + C + C GD T+ CGG S+++
Sbjct: 52 VGCFTDANGAAPTLQEHSLIDETNMTPALCMEFCGNFSTPLNFAGTELGNQCFCDFNIQGAPLQVN-DTLCNVACAGDSTLTCGGPLLVSIYQ 143
BLAST of mRNA_E-fasciculatus_F_contig1345.2588.1 vs. uniprot
Match: J5JTD6_BEAB2 (WSC domain-containing protein n=2 Tax=Beauveria bassiana TaxID=176275 RepID=J5JTD6_BEAB2) HSP 1 Score: 61.2 bits (147), Expect = 4.400e-6 Identity = 29/91 (31.87%), Postives = 49/91 (53.85%), Query Frame = 2
Query: 1049 EHLGCYADGTALILLLGHGIINQDNMTPAVCRAHCESFGSPFYATQNGGECWCGESENVKDYQEHGEGACVMGCFGDPTVACGGQDSFSLF 1321
++LGC++D ++ G + + ++M+ C +C G P T++G ECWCG S V++ Q AC C GD + CGG + S++
Sbjct: 556 KYLGCFSDSAERVIRGGPRVFSGEDMSNEKCMTYCRLNGFPTAGTEDGRECWCGNSI-VENLQLLPATACSTACQGDTSAHCGGTWAISIY 645 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1345.2588.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1345.2588.1 >prot_E-fasciculatus_F_contig1345.2588.1 ID=prot_E-fasciculatus_F_contig1345.2588.1|Name=mRNA_E-fasciculatus_F_contig1345.2588.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=511bp MNLLWTLLLASTTVAQGVHTCLDSDSDRCLPGSTSLDVRYCYMGDEDLEDback to top mRNA from alignment at E-fasciculatus_F_contig1345:5847..17730+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1345.2588.1 ID=mRNA_E-fasciculatus_F_contig1345.2588.1|Name=mRNA_E-fasciculatus_F_contig1345.2588.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=11884bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1345:5847..17730+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1345:5847..17730+ >mRNA_E-fasciculatus_F_contig1345.2588.1 ID=mRNA_E-fasciculatus_F_contig1345.2588.1|Name=mRNA_E-fasciculatus_F_contig1345.2588.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3066bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1345:5847..17730+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |