mRNA_E-fasciculatus_F_contig13446.2586.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13446.2586.1 vs. uniprot
Match: D8LH20_ECTSI (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH20_ECTSI) HSP 1 Score: 241 bits (616), Expect = 1.210e-77 Identity = 112/118 (94.92%), Postives = 115/118 (97.46%), Query Frame = 1
Query: 1 PGLTLIKGFVTEEEEAALLERFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLADVVRDMGDRGLKPSDPDQLTLNEYKPGQGISPHVDTHSAFEDGLASLSLGSG 354
PGLTLIKGFVTEEEE +LL+ FVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECL DVVR+MGDRGLKPSDPDQLTLNEYKPGQGISPHVDTHSAFEDGLASLSLGSG
Sbjct: 139 PGLTLIKGFVTEEEEGSLLKHFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLTDVVREMGDRGLKPSDPDQLTLNEYKPGQGISPHVDTHSAFEDGLASLSLGSG 256
BLAST of mRNA_E-fasciculatus_F_contig13446.2586.1 vs. uniprot
Match: A0A7S1HCL9_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HCL9_HEMAN) HSP 1 Score: 117 bits (294), Expect = 9.480e-31 Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 1
Query: 1 PGLTLIKGFVTEEEEAALLERFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLADVVRDMGDRGLKPSDPDQLTLNEYKPGQGISPHVDTHSAFEDGLASLSLGS 351
PGL L +GF+TEEEE L R V D+ W L RRVQH+G FDY R ++F P P+P L V GL P PDQLT+NEY PG+GI+ HVDTHSAFEDG+ S++L +
Sbjct: 80 PGLRLCEGFLTEEEEEECL-RIV--DESEWVTGLARRVQHYGYTFDYAIRGINFKKPQVPIPPLLKQVGDRAFSMGLVPFPPDQLTVNEYLPGKGINSHVDTHSAFEDGILSVTLAA 193
BLAST of mRNA_E-fasciculatus_F_contig13446.2586.1 vs. uniprot
Match: A0A7S2SEI1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEI1_9STRA) HSP 1 Score: 119 bits (299), Expect = 4.510e-30 Identity = 59/118 (50.00%), Postives = 79/118 (66.95%), Query Frame = 1
Query: 1 PGLTLIKGFVTEEEEAALLERFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLADVVRDMGDRGLKPSDPDQLTLNEYKPGQGISPHVDTHSAFEDGLASLSLGSG 354
PGLTLI +++EEEEA LL G W G L RRV+HFG F+Y R +DFDAPA PLP+ + + + + P P+Q+T+NEY PGQGI+ H+DTH+AF + L SL+LG+G
Sbjct: 129 PGLTLIGEWISEEEEAELLALLRPGP---WQGNLSRRVRHFGHTFNYGIRAIDFDAPAEPLPDAVEALAQRLHRDLALPRPPNQVTVNEYVPGQGIASHIDTHAAFGEVLCSLTLGAG 243
BLAST of mRNA_E-fasciculatus_F_contig13446.2586.1 vs. uniprot
Match: A0A812SEG8_9DINO (ALKBH8 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SEG8_9DINO) HSP 1 Score: 116 bits (291), Expect = 5.130e-29 Identity = 55/118 (46.61%), Postives = 75/118 (63.56%), Query Frame = 1
Query: 1 PGLTLIKGFVTEEEEAALLERFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLADVVRDMGDRGLKPSDPDQLTLNEYKPGQGISPHVDTHSAFEDGLASLSLGSG 354
PGL ++ F+T+EE +LL D W +KRRVQH+G FDY T + P +P A+V+ + D L P + DQLT+NEY+PG GI+ HVD HSAFEDG+A+++LGSG
Sbjct: 113 PGLHVVTDFITDEESVSLLREI---DARPWDTSIKRRVQHYGHAFDYATLKIAEQGTVPTMPSFAAEVISRLRDSSLMPHEVDQLTVNEYEPGVGIAFHVDAHSAFEDGIAAITLGSG 227
BLAST of mRNA_E-fasciculatus_F_contig13446.2586.1 vs. uniprot
Match: A0A2R5G246_9STRA (Alpha-ketoglutarate-dependent dioxygenase alkB-like 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G246_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.330e-28 Identity = 67/127 (52.76%), Postives = 77/127 (60.63%), Query Frame = 1
Query: 1 PGLTLIKGFVTEEEEAALLERFVQGDDV--RWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLA-------DVVRDMG-DRGLKPSDPDQLTLNEYKPGQGISPHVDTHSAFEDGLASLSLGS 351
PGL L++ FV EE LL R + +V P KRRV+HFG FDY TR D PE LA D VR+ G RGL+ DP+Q+T NEY PGQGI PHVDTHSAF DGLASLSLG+
Sbjct: 154 PGLRLLENFVNANEEKELLSRIDEAWEVPVHRRQPKKRRVRHFGYKFDYGTRRCDASRQVGTFPEWLARIADRVRDAVREAGATRGLEAWDPEQVTANEYLPGQGIPPHVDTHSAFTDGLASLSLGA 280
BLAST of mRNA_E-fasciculatus_F_contig13446.2586.1 vs. uniprot
Match: A0A813IB55_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IB55_POLGL) HSP 1 Score: 113 bits (282), Expect = 1.270e-27 Identity = 57/118 (48.31%), Postives = 74/118 (62.71%), Query Frame = 1
Query: 1 PGLTLIKGFVTEEEEAALLERFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLADVVRDMGDRGLKPSDPDQLTLNEYKPGQGISPHVDTHSAFEDGLASLSLGSG 354
PGL ++ FV++EE ALL D W +KRRVQH+G FDY + P LP VVR + + GL P +QLT+NEY+PG GI+ HVDTHSAFEDG+A+++LGSG
Sbjct: 123 PGLQVLPYFVSDEEAKALLAAV---DANAWDTTIKRRVQHYGHAFDYARLTIAEGGDVPELPSFCGGVVRRIAESGLMPEQVNQLTINEYEPGVGIALHVDTHSAFEDGIAAVTLGSG 237
BLAST of mRNA_E-fasciculatus_F_contig13446.2586.1 vs. uniprot
Match: A0A6B2LAX0_9EUKA (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LAX0_9EUKA) HSP 1 Score: 110 bits (276), Expect = 4.130e-27 Identity = 56/117 (47.86%), Postives = 73/117 (62.39%), Query Frame = 1
Query: 1 PGLTLIKGFVTEEEEAALLERFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLADVVRDMGDRGLKPSDPDQLTLNEYKPGQGISPHVDTHSAFEDGLASLSLGS 351
PGL +++ F++EEEE +LE Q +W +R VQH+G + Y T VD D LP D+V+ M D G+ PDQLT+N+YKPG GI PHVDTHS FE+ L SLSLG+
Sbjct: 121 PGLIMMEQFISEEEEQHILEALNQS---QWIRLSQRYVQHYGYAYRYETNDVDPDHKIGDLPTFTTDIVKRMMDTGMVEHIPDQLTVNKYKPGSGIPPHVDTHSIFEEALISLSLGA 234
BLAST of mRNA_E-fasciculatus_F_contig13446.2586.1 vs. uniprot
Match: A0A813HWY2_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HWY2_POLGL) HSP 1 Score: 108 bits (270), Expect = 6.640e-27 Identity = 55/110 (50.00%), Postives = 70/110 (63.64%), Query Frame = 1
Query: 25 FVTEEEEAALLERFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLADVVRDMGDRGLKPSDPDQLTLNEYKPGQGISPHVDTHSAFEDGLASLSLGSG 354
FV++EE ALL D W +KRRVQH+G FDY + P LP A VVR + + GL P +QLT+NEY+PG GI+ HVDTHSAFEDG+A+++LGSG
Sbjct: 5 FVSDEEAKALLAAV---DANAWDTTIKRRVQHYGHAFDYARLTIAEGGDVPELPSFCAGVVRRIAESGLMPEQVNQLTINEYEPGVGIALHVDTHSAFEDGIAAVTLGSG 111
BLAST of mRNA_E-fasciculatus_F_contig13446.2586.1 vs. uniprot
Match: A0A1Q9DQR0_SYMMI (Trimethylguanosine synthase n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DQR0_SYMMI) HSP 1 Score: 112 bits (281), Expect = 7.860e-27 Identity = 53/118 (44.92%), Postives = 74/118 (62.71%), Query Frame = 1
Query: 1 PGLTLIKGFVTEEEEAALLERFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLADVVRDMGDRGLKPSDPDQLTLNEYKPGQGISPHVDTHSAFEDGLASLSLGSG 354
PG+ L+ F+T+EE + LLE D W +KRRVQH+G FDY T + P +P +++ + + L P DQLT+NEY+PG GI+ HVD HSAFEDG+A+++LGSG
Sbjct: 119 PGVHLVTNFITDEEASNLLEEI---DGRSWDTSIKRRVQHYGHAFDYATLKIAKPGTVPDMPAFAGELISRLSESCLMPHGADQLTINEYQPGVGIAFHVDAHSAFEDGIAAITLGSG 233
BLAST of mRNA_E-fasciculatus_F_contig13446.2586.1 vs. uniprot
Match: A0A812ZAS0_9DINO (Calmodulin n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812ZAS0_9DINO) HSP 1 Score: 113 bits (283), Expect = 8.630e-27 Identity = 53/118 (44.92%), Postives = 75/118 (63.56%), Query Frame = 1
Query: 1 PGLTLIKGFVTEEEEAALLERFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLADVVRDMGDRGLKPSDPDQLTLNEYKPGQGISPHVDTHSAFEDGLASLSLGSG 354
PG+ L+ F+T+EE + LLE D W +KRRVQH+G FDY T + P +P +++ + + L P + DQLT+NEY+PG GI+ HVD HSAFEDG+A+++LGSG
Sbjct: 628 PGVHLVTNFITDEEASNLLEEI---DGRSWDTSIKRRVQHYGHAFDYATLKIAKPGTVPDMPAFAEELISRLSESCLMPHETDQLTINEYEPGVGIAFHVDAHSAFEDGIAAITLGSG 742 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13446.2586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13446.2586.1 >prot_E-fasciculatus_F_contig13446.2586.1 ID=prot_E-fasciculatus_F_contig13446.2586.1|Name=mRNA_E-fasciculatus_F_contig13446.2586.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=121bp PGLTLIKGFVTEEEEAALLERFVQGDDVRWTGPLKRRVQHFGRVFDYHTRback to top mRNA from alignment at E-fasciculatus_F_contig13446:1482..3080+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13446.2586.1 ID=mRNA_E-fasciculatus_F_contig13446.2586.1|Name=mRNA_E-fasciculatus_F_contig13446.2586.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1599bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13446:1482..3080+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13446:1482..3080+ >mRNA_E-fasciculatus_F_contig13446.2586.1 ID=mRNA_E-fasciculatus_F_contig13446.2586.1|Name=mRNA_E-fasciculatus_F_contig13446.2586.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=726bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13446:1482..3080+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |