mRNA_E-fasciculatus_F_contig13442.2584.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13442.2584.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 352 bits (904), Expect = 3.970e-111 Identity = 323/423 (76.36%), Postives = 353/423 (83.45%), Query Frame = 1
Query: 547 AMSAPQREGDRSLLDGFEIEIFKLVQREATLEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGAAGWRGCDGRTLLGAAACGKSGKMVRALLAAGARSDVNVLFGAKRESALHVAAARGAEDSCKALMIAGADPNLRDSEEYSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIVKAFLDKDSSAVHATDEYGYTALHCCAPQYFEGKPVGDNGDAVRVLLEAGADVNAKTTDYACCDTPLHIAVNRRIASIGTILALLEGGANVNSRDGYEKTPLHVACSLSSAAAVELLLRWGADEKLTDEDGTTPGDEIGAMHHHGNNNEEIEVDNQRIRHMLARAPA 1815
+ +A Q+ DR+ +DGFE+EIFKLVQREAT +QWK+WLRAPLEHAAA GNL LFTRLMDAGA AGWRGCDGRTLLGAAAC K+ K++RALL AGA+SDVNVLFGAKRESALH+AAARGAE++ KALMIAGA+PNLR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TIVKAFLD D+S V+ATD YGYTALH A G+ D GDAVRVLL AGADV+AKTTD PLHIAV R+ S GTI ALLEGGA+VN RD ++TPLH AC+ SS AAVELLLRWGADEKLTD+ TP D IG G+++ +IE D QRI MLARAPA
Sbjct: 3 SAAASQQSQDRTRVDGFEVEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKALMIAGANPNLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGR---DKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIEADGQRIHQMLARAPA 422
BLAST of mRNA_E-fasciculatus_F_contig13442.2584.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 328 bits (841), Expect = 3.740e-102 Identity = 289/420 (68.81%), Postives = 324/420 (77.14%), Query Frame = 1
Query: 568 EGDRSLLDGFEIEIFKLVQREATLEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGAAGWRGCDGRTLLGAAACGKSGKMVRALLAAGARSDVNVLFGAKRESALHVAAARGAEDSCKALMIAGADPNLRDSEEYSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----ATIVKAFLDKDSSAVHATDEYGYTALHCCAPQYFEGKPVGDNGDAVRVLLEAGADVNAKTTDYACCDTPLHIAVNRRIASIGTILALLEGGANVNSRDGYEKTPLHVACSLSSAAAVELLLRWGADEKLTDEDGTTPGDEIGAMHHHGNNNEEIEVDNQRIRHMLARAPA 1815
E DRS L GFEIEIFKL++REAT EQWK+WLRAPLEHAAA+GNLDLFTRLMDAGA+ AGWRGC GRTLLGAAA G+S KM+R LL AGA DVNVLFG + ESALHVAAARGA+D+C+ALMIAGADPN+RD SPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A ++KA LDK SS V ++ G+ ALH A F+ + V D GDAVRVLL AGADVN K T+ +C TPLH+AVNR + S GTI ALLEGGAN+N+R + TPLH+AC+ + VELLLRWGADEKL + DG TP D +G + + ++EE E DNQRI MLARAPA
Sbjct: 8 EEDRSRLVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVAS--FD-ETVRDKGDAVRVLLGAGADVNVKGTNDSCA-TPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPA 423
BLAST of mRNA_E-fasciculatus_F_contig13442.2584.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 310 bits (794), Expect = 1.300e-95 Identity = 214/416 (51.44%), Postives = 238/416 (57.21%), Query Frame = 1
Query: 568 EGDRSLLDGFEIEIFKLVQREATLEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGAAGWRGCDGRTLLGAAACGKSGKMVRALLAAGARSDVNVLFGAKRESALHVAAARGAEDSCKALMIAGADPNLRDSEEYSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIVKAFLDKDSSAVHATDEYGYTALHCCAPQYFEGKPVGDNGDAVRVLLEAGADVNAKTTDYACCDTPLHIAVNRRIASIGTILALLEGGANVNSRDGYEKTPLHVACSLSSAAAVELLLRWGADEKLTDEDGTTPGDEIGAMHHHGNNNEEIEVDNQRIRHMLARAPA 1815
E DRS LDGFEIEIFKLVQR AT EQWK+WLRAP EHAAA+GNLD FTRLMDAGA+ AGWRGC+GRTLLGAAA G+S KMVR L AGA DVNVLFG +RE ALMI GADPN+RD + SP XXXXXXXXXXXX A +VKA LDKDS V ATD G+ ALH A +G PV DNGDAVRVLL AGADV+AK T C DT L++AVNRRIAS GTI ALLEGGAN+N+R G ++TPLHVACS SSA VELLLRWGAD+KLT G TP + A+ ++EE+E DNQRIR MLAR PA
Sbjct: 8 EEDRSRLDGFEIEIFKLVQRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVNVLFGGERE----------------ALMIDGADPNVRDRRKRSPLHLAAVAGHHRVVGMLLLNRACVHAKTASQXXXXXXXXXXXXALCISELLLGANSHLEAVQELLAAGANYSLRTNGSRSPLEIAANRGQ-------------------ADVVKALLDKDSGEVDATDGGGWAALHYAAS--IDG-PVRDNGDAVRVLLRAGADVSAKGTKDPC-DTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDEELEADNQRIRRMLARDPA 384
BLAST of mRNA_E-fasciculatus_F_contig13442.2584.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 292 bits (747), Expect = 2.660e-88 Identity = 298/418 (71.29%), Postives = 328/418 (78.47%), Query Frame = 1
Query: 565 REGDRSLLDGFEIEIFKLVQREATLEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGA-DGAAGWRGCDGRTLLGAAACGKSGKMVRALLAAGARSDVNVLFGAKRESALHVAAARGAEDSCKALMIAGADPNLRDSEEYSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIVKAFLDKDSSAVHATDEYGYTALHCCAPQYFEGKPVGDNGDAVRVLLEAGADVNAKTTDYACCDTPLHIAVNRRIASIGTILALLEGGANVNSRDGYEKTPLHVACSLSSAAAVELLLRWGADEKLTDEDGTTPGDEIGAMHHHGNNNEEIEVDNQRIRHMLARAPA 1815
RE RS LDGFEIEIFKLVQ E T EQWKQWL+ PLEHAAA+GNLDLFTRLMDAG G GWRGC+GRTLLGAAA GKS K+VRALL AGA DVNVLFG + +SALHVAAARGAE++ KALM+AGADPNL D + Y XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V D+ GYTA+HC ++ P+ DNG VR+LLEAG VNA+T TPLH AV RRIASI T LALLEGGAN N+ + TPLHVAC S+ AAVELLLRWGADE ++++G P D IG N+E+++ D++RIR MLARAPA
Sbjct: 8 REDGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-VDTGDDQGYTAIHCAVNRH---GPL-DNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPA 420
BLAST of mRNA_E-fasciculatus_F_contig13442.2584.1 vs. uniprot
Match: D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI) HSP 1 Score: 268 bits (684), Expect = 4.160e-80 Identity = 233/402 (57.96%), Postives = 256/402 (63.68%), Query Frame = 1
Query: 550 MSAPQREGDRSLLDGFEIEIFKLVQREATLEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGAAGWRGCDGR--TLLGAAACG-KSGKMVRALLAAGARSDVNVLFGAKRESALHVAAARGAEDSCKALMIAGADPNLRDSEEYSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ATIVKAFLDKDSSAVHATDEYGYTALHCCAPQYFEGKPVGDNGDAVRVLLEAGADVNAKTTDYACCD--TPLHIAVNRRIASIGTILALLEGGANVNSRDGYEKTPLHVACSLSSAAAVELLLRWGADEKLTDEDGTTPGDEIGA 1734
MSA +RE DRS +DGFEIEIFKLV+ EAT +QWKQWLR PLEHAAAKGNLDLFTRL+DAGA G GW+G R TLLGAAACG KS MV+ALL AG VN FGA RESALHV ARGAED+ KALM+AGADPNL + + SP XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A ++KAFLDKDS V ATD G+TALH A + + V DNGDAVR LLEAGADVN KT +A D TPLH+AVNRR+ASI I +TPLHVAC + + VELLLRWGADE L + TP DEIG
Sbjct: 1 MSASEREEDRSRVDGFEIEIFKLVKEEATSKQWKQWLRTPLEHAAAKGNLDLFTRLIDAGAGGEPGWQGWGHRERTLLGAAACGNKSDVMVQALLEAGETEFVNTSFGATRESALHVTVARGAEDASKALMMAGADPNLGNVDGDSPLHLAAEAGHHRVIGILLLRKEAQSADPMNLFLETXXXXXXXXXXXLCISELLMGGADKDVTDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGNAAMLKAFLDKDSREVDATDGRGWTALHYAA---YVDRSVHDNGDAVRALLEAGADVNVKTDAHASDDIFTPLHVAVNRRMASICMIXXXXXXXXXXXXXXXCNQTPLHVACMWGNVSGVELLLRWGADEMLKNHRADTPADEIGV 399
BLAST of mRNA_E-fasciculatus_F_contig13442.2584.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE) HSP 1 Score: 261 bits (666), Expect = 3.030e-73 Identity = 211/430 (49.07%), Postives = 242/430 (56.28%), Query Frame = 1
Query: 550 MSAPQREGD-RSLLDGFEIEIFKLVQREATLEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGAAGWRGCDGRTLLGAAACGKSGKMVRALLAAGARSDVNVLFGAKRESALHVAAARGAEDSCKAL-------MIAGADPNLRDSEEYSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIVKAFLDKDSSAVHATDEYGYTALHCCAPQYFEGKPVGDNGDAVRVLLEAGADVNAKTTDYACCDTPLHIAVNRRIASIGTILALLEGGANVNSRDGYEKTPLHVACSLSSAAAVELLLRWGADEKLTDEDGTTPGDEIGAMHHHGNNNEEIEVDNQRIRHMLARAPA 1815
MSA +R+ + RS LD FEIEIFKLVQ+EAT EQWK+WLRAPLEHAAA+GNLD FTRLMDAGA+ AG RGC GRTLLGA AC +S KMVR LL GA DV VLFG + ES LHV+AARGAEDSC+ + AD + + + + +P XXXXXXXXXXXXXXXXXXXXXXXX S AT+ ALH A +G PV DNGDAVRVLL AGA++NAK T C DT L++AVNRR+AS GTI ALLEG AN+N+R G ++TPLHVACS SSA VELLLRWGADEKLT D ++EE+E DNQRIR MLAR PA
Sbjct: 501 MSASKRQEEGRSCLDCFEIEIFKLVQKEATSEQWKEWLRAPLEHAAAEGNLDFFTRLMDAGANVEAGRRGCHGRTLLGATACDRSEKMVRTLLTTGATDDVAVLFGVEHESPLHVSAARGAEDSCRVIGENVVRYTSLPADVHAKTTSQQTPLHLAASEGHALCIFELLLGGADKDVVDRHGKXXXXXXXXXXXXXXXXXXXXXXXXYSLRTNGSR-------------------------------------------------------SPLEIATNR----ALHYAAS--IDG-PVHDNGDAVRVLLRAGANINAKGTKDPC-DTSLYLAVNRRMASDGTIRALLEGRANINARTGGDQTPLHVACSRSSAVGVELLLRWGADEKLTTNDDL--------------DDEELEADNQRIRRMLARDPA 853
BLAST of mRNA_E-fasciculatus_F_contig13442.2584.1 vs. uniprot
Match: D8LQL7_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL7_ECTSI) HSP 1 Score: 218 bits (556), Expect = 7.170e-62 Identity = 240/406 (59.11%), Postives = 266/406 (65.52%), Query Frame = 1
Query: 550 MSAPQREG-DRSLLDGFEIEIFKLVQREATLEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGAAGWRGCDGRTLLGAAACGKSGKMVRALLAAGARSDVNVLFGAKRESALHVAAARGAEDSCKALMIAGADPNLRDSEEYSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIVKAFLDKDSSAVHATDEYGYTALHCCAPQYFEGKPVGDNGDAVRVLLEAGADVNAKTTDYACCDTPLHIAVNRRIASIGTILALLEGGANVNSRDGYEKTPLHVACSLSSAAAVELLLRWGADEKLTDEDGTTPGDEIGAMHHHGNNNEE 1764
M A RE DR+ LDGFEIEIF+LVQREAT EQWK+WLRAPLEHAAA+GNLDLFTRLMDAGA+G AGW ALMIAGADPNLRD + SP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LDKDSS + AT+++G ALH A F+G PVG+NGDA+ VLL AGADVN K T CC TPLH+AV+ AS GTI ALLEGG +VN+R + TPLH A +S + VELLLRWGADEKL + DG TP D +G + + ++EE
Sbjct: 1 MPASNREEEDRARLDGFEIEIFELVQREATAEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANGKAGW----------------------------------------------------------ALMIAGADPNLRDGRKRSPLHLAAEAGHHRVIGSLLLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLDKDSSELDATNDFGRAALHYAAS--FDG-PVGNNGDAILVLLGAGADVNVKATTAVCCFTPLHVAVSHWKASNGTICALLEGGGHVNARTQHNNTPLHTAYECASVSVVELLLRWGADEKLANNDGDTPADVVGVLEQNDLDDEE 345
BLAST of mRNA_E-fasciculatus_F_contig13442.2584.1 vs. uniprot
Match: D8LQE2_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE2_ECTSI) HSP 1 Score: 211 bits (536), Expect = 1.240e-61 Identity = 113/141 (80.14%), Postives = 118/141 (83.69%), Query Frame = 1
Query: 550 MSAPQREGDRSLLDGFEIEIFKLVQREATLEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGAAGWRGCDGRTLLGAAACGK-SGKMVRALLAAGARSDVNVLFGAKRESALHVAAARGAEDSCKALMIAGADPNLRDSE 969
M AP+R+G RS LDGFEIEIFKLV+ EA EQWKQW RAPLEHA A+GNLDLFTRLMDAGADG AGWRGC GRTLLGAAACG S KMVRALL AGAR DVNV FG ES LHV+AARGAE SC ALMIAGADPNLRD E
Sbjct: 1 MYAPKRKGHRSRLDGFEIEIFKLVKEEAAPEQWKQWFRAPLEHATARGNLDLFTRLMDAGADGEAGWRGCHGRTLLGAAACGNNSDKMVRALLEAGARRDVNVRFGNTNESTLHVSAARGAEASCTALMIAGADPNLRDWE 141
BLAST of mRNA_E-fasciculatus_F_contig13442.2584.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 229 bits (584), Expect = 1.140e-60 Identity = 183/414 (44.20%), Postives = 212/414 (51.21%), Query Frame = 1
Query: 574 DRSLLDGFEIEIFKLVQREATLEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGAAGWRGCDGRTLLGAAACGKSGKMVRALLAAGARSDVNVLFGAKRESALHVAAARGAEDSCKALMIAGADPNLRDSEEYSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIVKAFLDKDSSAVHATDEYGYTALHCCAPQYFEGKPVGDNGDAVRVLLEAGADVNAKTTDYACCDTPLHIAVNRRIASIGTILALLEGGANVNSRDGYEKTPLHVACSLSSAAAVELLLRWGADEKLTDEDGTTPGDEIGAMHHHGNNNEEIEVDNQRIRHMLARAPA 1815
DRS LDGFE+EI +LV+ AT EQW+QWLR PLEHAAAKGNLDLFTRLMDAG+ G GWRGC+GRTLLGA A G+S KMVRALL AG D NV F A+ +SALHVAAAR DPNL + Y XXXXXXXXXXXXXXXXX ATIVKAFL+ V TD+ YT LH A +G V VLLEAGADVNAKT + TPLH+AV+RR++SI TI A TPLHVAC+ S+AA V+LLL WGAD ++ +G P D I A G ++E IE D++ +R MLARAPA
Sbjct: 10 DRSHLDGFEVEIVELVREGATSEQWRQWLRIPLEHAAAKGNLDLFTRLMDAGSSGEPGWRGCNGRTLLGATAYGESEKMVRALLEAGVTYDRNVRFSAEGKSALHVAAAR--------------DPNLPACKGYHALHVAAERGHDRVISLLLLKGAHVDAKTYSGDAPLXXXXXXXXXXXXXXXXXLGGAHTDVAERHPTNSSGRWKCFWLPVPTGGRPDNGGWSSLPNAVCCGH--------ATIVKAFLETGID-VDTTDDQAYTVLHRAADM---------DGCVVHVLLEAGADVNAKTDQNSFLYTPLHLAVDRRVSSIRTIRAXXXXXXXXXXXSEDNDTPLHVACTYSNAAVVKLLLCWGADGTCSNGNGHVPADVIRAHDEDGLDDEHIEADHKHVRRMLARAPA 391
BLAST of mRNA_E-fasciculatus_F_contig13442.2584.1 vs. uniprot
Match: D8LQE9_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE9_ECTSI) HSP 1 Score: 189 bits (480), Expect = 1.180e-52 Identity = 103/140 (73.57%), Postives = 114/140 (81.43%), Query Frame = 1
Query: 571 GDRSLLDGFEIEIFKLVQREATLEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGAAGWRG--CDGRTLLGAAACG-KSGKMVRALLAAGARSDVNVLFGAKRESALHVAAARGAEDSCKALMIAGADPNLRDSEEYSP 981
GDRS +DGFEIEIFKLV+ EAT QWKQWLR PLEHAAAKGNLDLFTRLMDAGA G GWRG C RTLLGAAACG KS KM+ ALL AG DVN +FG +RESALHV+AARGAE++ KALM AGADP+L + E+ SP
Sbjct: 6 GDRSRVDGFEIEIFKLVKEEATAGQWKQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPGWRGWGCHERTLLGAAACGTKSDKMIWALLEAGVTDDVNAVFGTERESALHVSAARGAEEASKALMAAGADPDLGNFEDESP 145 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13442.2584.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13442.2584.1 >prot_E-fasciculatus_F_contig13442.2584.1 ID=prot_E-fasciculatus_F_contig13442.2584.1|Name=mRNA_E-fasciculatus_F_contig13442.2584.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=422bp MSAPQREGDRSLLDGFEIEIFKLVQREATLEQWKQWLRAPLEHAAAKGNLback to top mRNA from alignment at E-fasciculatus_F_contig13442:1830..3644+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13442.2584.1 ID=mRNA_E-fasciculatus_F_contig13442.2584.1|Name=mRNA_E-fasciculatus_F_contig13442.2584.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1815bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13442:1830..3644+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13442:1830..3644+ >mRNA_E-fasciculatus_F_contig13442.2584.1 ID=mRNA_E-fasciculatus_F_contig13442.2584.1|Name=mRNA_E-fasciculatus_F_contig13442.2584.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2532bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13442:1830..3644+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |