prot_E-fasciculatus_F_contig1343.2573.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1343.2573.1
Unique Nameprot_E-fasciculatus_F_contig1343.2573.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length260
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1343.2573.1 vs. uniprot
Match: D7FLM2_ECTSI (Tetratricopeptide repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLM2_ECTSI)

HSP 1 Score: 422 bits (1086), Expect = 8.020e-133
Identity = 215/249 (86.35%), Postives = 218/249 (87.55%), Query Frame = 0 
Query:    1 MLPALDRPRGEGGAGGPLVPLPLEKPKFHHGEARPKRPKKEKPPKRVKRGERQSIGDEDFGQSTLLDDELRGHVNARTIAAASMEMARSKPQQXXXXXXXXXXGFQDGDEDSRLCQELLSKAPHGHNDASKYWSRSLRLYAAQSHPEEFALIQLKLAQTFYATAMLGTVVKDVLKSLESCLHHYNICLQLYNPSRYPRRWGLAALEMGMALGAMADLVEREIPRVKPDGEAGKDAVAGFYTEVAVMTNK 249
            MLPALDRPRG+GG GGPLVPLPLEKPKFHHGEARPKR            GERQSIGDEDFGQSTLLDDELRGHVNARTIAAAS+EMARSKPQQ          G QDGDEDSRLCQELLSKAPHGHNDA KYWSRSLRLY AQSHPEEFALIQLKLAQTFY TAMLGTVVKDVLKSLESCLHHYNICLQLYNPSRYPRRWGLAALEMGMALGAMADLVEREI RVKPD EAG DAVAGFY EVAV+TNK
Sbjct:    1 MLPALDRPRGDGGPGGPLVPLPLEKPKFHHGEARPKRXXXXXXXXXXXXGERQSIGDEDFGQSTLLDDELRGHVNARTIAAASVEMARSKPQQQHRQQRNNDGGTQDGDEDSRLCQELLSKAPHGHNDAFKYWSRSLRLYVAQSHPEEFALIQLKLAQTFYTTAMLGTVVKDVLKSLESCLHHYNICLQLYNPSRYPRRWGLAALEMGMALGAMADLVEREIQRVKPDAEAGTDAVAGFYKEVAVLTNK 249
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1343.2573.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLM2_ECTSI8.020e-13386.35Tetratricopeptide repeat domain protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1343contigE-fasciculatus_F_contig1343:8382..11423 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1343.2573.1mRNA_E-fasciculatus_F_contig1343.2573.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1343 8382..11423 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1343.2573.1 ID=prot_E-fasciculatus_F_contig1343.2573.1|Name=mRNA_E-fasciculatus_F_contig1343.2573.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=260bp
MLPALDRPRGEGGAGGPLVPLPLEKPKFHHGEARPKRPKKEKPPKRVKRG
ERQSIGDEDFGQSTLLDDELRGHVNARTIAAASMEMARSKPQQQNRQQRN
NGGGFQDGDEDSRLCQELLSKAPHGHNDASKYWSRSLRLYAAQSHPEEFA
LIQLKLAQTFYATAMLGTVVKDVLKSLESCLHHYNICLQLYNPSRYPRRW
GLAALEMGMALGAMADLVEREIPRVKPDGEAGKDAVAGFYTEVAVMTNKA
GGYGGSGGH*
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