mRNA_E-fasciculatus_F_contig1339.2539.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1339.2539.1
Unique NamemRNA_E-fasciculatus_F_contig1339.2539.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1339.2539.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE)

HSP 1 Score: 492 bits (1266), Expect = 2.560e-164
Identity = 313/443 (70.65%), Postives = 330/443 (74.49%), Query Frame = 1
Query:    1 KDTDLSFTYKDPDGDDIVFDKDSELKLALRLCPGSLEISAAGKENKPANKLDSEEKIYKIAARNLREYNGVPSMTPPKLVKTLAFLKLHPHRLVKQGLAPKVLLARMKAEAANNAKLSKVPLGDGKNNEDLAESAAAGMELMSVEDDKKEWDDGFVSVEPDASATAAPIAAETPIPGNDSEEENNDAAPAVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAERKITHKRHGRDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------AHMVDDHEAPGGGCRGRRGGPLFHPAHQHYAEVFDEDEGGHPGFHPHHGPPARWMAIRRRYGGGD--------GQQQRRDHYWG 1269
            KDTDLSFTYKDPDGDDIVFDKDSELKLA+RLCP SLEISA  KE++PA K D E ++YKIAARNLREYNGVPSMT PKL+KTLAFLKL+P RLVKQGLAPKVLLARMKAEAANNAK+SKVPLGDGKNNEDLAES AAGMELMSVEDDKKEW+DGFVS E DASA A PI A+T  P ND+EEENNDAAP  KK+LIHKAFI GGIQLRPREVRPLLVALDVRPCRLAKLGLV+GKDLRAML+AE+K  HKR    N XXXXXXXXXXXXXXX XXXXX         HPFA                              XXXXXXXXXXXXXXXX                      AHM D  +APGGG  G RG PLFHP HQHYAEVFDEDE GHPG HPHHGPP RWMAIR  +GGG         GQQQRRD YWG
Sbjct:   69 KDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDAAPETKKDLIHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLRAEKKAAHKRCDHGNNXXXXXXXXXXXXXXXDXXXXXHRMAGRP--HPFAPPPPSPPAHQEVGDAMFAARGGRGRHGSPHXXXXXXXXXXXXXXXXPPPMKGMMRGGRXXXXXXXXXPAHMEDPGDAPGGGGGGHRGVPLFHPVHQHYAEVFDEDERGHPGVHPHHGPP-RWMAIRNSHGGGYXXXXXXXVGQQQRRDFYWG 508          
BLAST of mRNA_E-fasciculatus_F_contig1339.2539.1 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI)

HSP 1 Score: 475 bits (1223), Expect = 4.870e-158
Identity = 344/458 (75.11%), Postives = 360/458 (78.60%), Query Frame = 1
Query:    1 KDTDLSFTYKDPDGDDIVFDKDSELKLALRLCPGSLEISAAGKENKPANKLDSEEKIYKIAARNLREYNGVPSMTPPKLVKTLAFLKLHPHRLVKQGLAPKVLLARMKAEAANNAKLSKVPLGDGKNNEDLAESAAAGMELMSVEDDKKEWDDGFVSVEPDASATAAPIAAETPIPGNDSEEENNDAAPAVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAERKITHKRHGRDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHMVD----------------------DHEAPGGGCRGRRGGPLFHPAHQHYAEVFDEDEGGHPGFHPHHGPPARWMAIRRRYGGGD-------------GQQQRRDHYWG 1269
            KDTDLSFTYKDPDGDDIVFDKDSEL LA+RLCPGSLEISAAGKENKPANK D E ++YKIAARNLREYNGVPSMTP KLVKTLAFL+L+P RLVKQGLAPKVLLARMKAEAANNAK+SKVPLGDGKNNEDLAES AAGMELMSVEDDKKEW+DGFVSVEP          A+T  PGND+EE+N+  AP VKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAE+K+ HKR G D XXXXXXXXXXXXXXXXXXXXXXXX       HPFAXXXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXX    XXXX   +                                    GGPLFHPAHQHYAEVFDEDEGGHPGFHPHHGPP RWMAIRR +GGG              GQQQRRD+YWG
Sbjct:   51 KDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSVEP----------ADTSSPGNDNEEKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAEKKVAHKRRGHDXXXXXXXXXXXXXXXXXXXXXXXXXMAGRP--HPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXRHGAPHXXXXXXXXXXXXXXXGAPHXXXXXPPMKRMMXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXGGPLFHPAHQHYAEVFDEDEGGHPGFHPHHGPP-RWMAIRRAHGGGGYGGGYVGVFGGGVGQQQRRDYYWG 495          
BLAST of mRNA_E-fasciculatus_F_contig1339.2539.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE)

HSP 1 Score: 443 bits (1139), Expect = 7.290e-145
Identity = 315/472 (66.74%), Postives = 331/472 (70.13%), Query Frame = 1
Query:    1 KDTDLSFTYKDPDGDDIVFDKDSELKLALRLCPGSLEISAAGKENKPANKLDSEEKIYKIAARNLREYNGVPSMTPPKLVKTLAFLKLHPHRLVKQGLAPKVLLARMKAEAANNAKLSKVPLGDGKNNEDLAESAAAGMELMSVEDDKKEWDDGFVSVEPDASATAAPIAAETPIPGNDSEEENNDAAPAVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAERKITHKRHGRDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHMVDDHEAPGGG-------------------CRG------------------------------------------RRGGPLFHPAHQHYAEVFDEDEGGHPGFHPHHGPPARWMAIRRRYGGG 1233
            KDTDLSFTYKDPDGDDIVFDKDSEL LA+RLCP SLEISAAGKENKP NK D E ++YKIAARNLREYNGVPSMT PKL+KTLAFLKL+P RLVKQGLAPK LLARMKAEAANN K+SKV LGDG+NNEDLAES AAGMELMSVEDDKKE ++GFVS +PDASA A PI A+T  P ND+EEEN+DAAP VKKNLIH AFIAGGIQLRPREVRPLLVALDVRP RLAKLGLVNGK LRAMLQAE K  HKRHG DN            XXX                HPFA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           +    A GGG                    RG                                          RRGGPLFHPAHQHY EVFDED GGHPGF P+HGPP RWMAIRR +GGG
Sbjct:   51 KDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKENKPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEAANNMKVSKVTLGDGENNEDLAESVAAGMELMSVEDDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDAAPEVKKNLIHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYLRAMLQAETKAAHKRHGHDNNNDDTAALHHRRXXXRDYHRQQHRMTSRP--HPFAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSAHQEVGDAM--FAARGGGRHXXXXXXXXXXXXXMKRTMRGGRPQRFAPPRPSRSXXXXXXXPXXXXXXXXXXXXXXXXXXVDRRGGPLFHPAHQHYTEVFDEDGGGHPGFRPYHGPP-RWMAIRRAHGGG 517          
BLAST of mRNA_E-fasciculatus_F_contig1339.2539.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI)

HSP 1 Score: 405 bits (1041), Expect = 1.240e-131
Identity = 212/253 (83.79%), Postives = 225/253 (88.93%), Query Frame = 1
Query:    1 KDTDLSFTYKDPDGDDIVFDKDSELKLALRLCPGSLEISAAGKENKPANKLDSEEKIYKIAARNLREYNGVPSMTPPKLVKTLAFLKLHPHRLVKQGLAPKVLLARMKAEAANNAKLSKVPLGDGKNNEDLAESAAAGMELMSVEDDKKEWDDGFVSVEPDASATAAPIAAETPIPGNDSEEENNDAAPAVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAERKITHKRHG 759
            KDTDLSFTYKDPDGDDIVFDKDSELKLA+RLCPGSLEISAAGKE K A   DSE ++YKIAARNLREYNGVPSMTPPKLVKTLAFLKL+P RLVKQGLAPK LL RMKAEAANNAK+SKVPLGDGKNNEDLAES AAGMELMS+EDDKKEW+DGFVSVEP          A+T  P ND+EE+N+  AP VKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLV+GKDLRAMLQAE+K  HKRHG
Sbjct:   67 KDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEKKAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSLEDDKKEWNDGFVSVEP----------ADTSSPDNDNEEKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKKTAHKRHG 309          
BLAST of mRNA_E-fasciculatus_F_contig1339.2539.1 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE)

HSP 1 Score: 398 bits (1023), Expect = 7.010e-129
Identity = 212/253 (83.79%), Postives = 221/253 (87.35%), Query Frame = 1
Query:    1 KDTDLSFTYKDPDGDDIVFDKDSELKLALRLCPGSLEISAAGKENKPANKLDSEEKIYKIAARNLREYNGVPSMTPPKLVKTLAFLKLHPHRLVKQGLAPKVLLARMKAEAANNAKLSKVPLGDGKNNEDLAESAAAGMELMSVEDDKKEWDDGFVSVEPDASATAAPIAAETPIPGNDSEEENNDAAPAVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAERKITHKRHG 759
            KDTDLSFTYKDPDGDDIVFDKDSEL LALRLCPGSLEISAAGKENK     DSEE +YKIAARNLREYNGVPSMTPPKLVKTLAFLKL+P RLVKQGLAPK+LLARMKAE ANNAKLSKV LGDGKNNEDLAE  AAGME MSVEDDKKEW+DGFVSVEP          AET    N +EEEN+DAAP VK+NLIHKAFIAGGIQLRPREVRPLLVALDVRP RLAKLGLV+GKDLRAMLQAE+K  HKRHG
Sbjct:   78 KDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKENKATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANNAKLSKVRLGDGKNNEDLAEWVAAGMEFMSVEDDKKEWNDGFVSVEP----------AETSSSDNGNEEENDDAAPEVKQNLIHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDLRAMLQAEKKAAHKRHG 320          
BLAST of mRNA_E-fasciculatus_F_contig1339.2539.1 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE)

HSP 1 Score: 397 bits (1021), Expect = 1.490e-128
Identity = 212/252 (84.13%), Postives = 222/252 (88.10%), Query Frame = 1
Query:    4 DTDLSFTYKDPDGDDIVFDKDSELKLALRLCPGSLEISAAGKENKPANKLDSEEKIYKIAARNLREYNGVPSMTPPKLVKTLAFLKLHPHRLVKQGLAPKVLLARMKAEAANNAKLSKVPLGDGKNNEDLAESAAAGMELMSVEDDKKEWDDGFVSVEPDASATAAPIAAETPIPGNDSEEENNDAAPAVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAERKITHKRHG 759
            DTDLSFTYKDPDGDDIVFDK+SEL+LALRLCPGSLEISAAGKENK     DSEEK+YKIAARNLREYNGVPSMTPPKLVKTLAFLKL+P RLVKQGLAPKVLLARMKAEAANNAK+SKVPLGDGKNNEDLAES AAGMELMSVED KKEW+DGFVSVEP          AE   P ND+EE+N DAAP  KKNLIHKAFIAGGIQLRPREVRPLLVALDV P RLAKLGLV GKDLRAML+AE+K  HKRHG
Sbjct:   70 DTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKENKATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDGKKEWNDGFVSVEP----------AEISFPANDNEEKN-DAAPEAKKNLIHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDLRAMLRAEKKTAHKRHG 310          
BLAST of mRNA_E-fasciculatus_F_contig1339.2539.1 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 5.280e-112
Identity = 186/221 (84.16%), Postives = 198/221 (89.59%), Query Frame = 1
Query:    1 KDTDLSFTYKDPDGDDIVFDKDSELKLALRLCPGSLEISAAGKENKPANKLDSEEKIYKIAARNLREYNGVPSMTPPKLVKTLAFLKLHPHRLVKQGLAPKVLLARMKAEAANNAKLSKVPLGDGKNNEDLAESAAAGMELMSVEDDKKEWDDGFVSVEPDASATAAPIAAETPIPGNDSEEENNDAAPAVKKNLIHKAFIAGGIQLRPREVRPLLVALDV 663
            KDTDLSFTYKDPDGDDIVFDKDSELKLA+RLCP SLEISAA KE+KPANK D E ++YKIAARNLREYNGVPSMTPPKL+KTLAFLKL+P RLVKQGLAPKVLLARMKAEAANNAK+SKVPLGDGKNNEDLA+S AAGMELMSVED KKEW+DGFVS E DA A AAPI AET  P ND EEEN+DAAP VKKNLIHKAFIAGGIQLRPRE   L V++ V
Sbjct:   66 KDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKESKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLADSVAAGMELMSVED-KKEWNDGFVSAESDAPAAAAPITAETSSPDNDKEEENDDAAPEVKKNLIHKAFIAGGIQLRPREGLLLGVSIFV 285          
BLAST of mRNA_E-fasciculatus_F_contig1339.2539.1 vs. uniprot
Match: A0A6H5K3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 1.400e-12
Identity = 64/174 (36.78%), Postives = 79/174 (45.40%), Query Frame = 1
Query:  133 NKPANK--LDSEEKIYKIAARNLREYNGVPSMTPPKLVKTLAFLKLHPHRLVKQGLAPKVLLARMKAEAANNAKLSKVPLGDGKNNEDLAESAAAGMELMSVEDDKKEWDDGFVSVEPDASATAAPIAAETPIPGNDSEEENNDAAPAVKKNLIHKAFIAGGIQLRPREVRPLL 648
            NKP+ K  ++    +YK AARNL EY+GVPSMT   L KT+  L+L P RLV QGLAPK LL   + ++A                    E      +   V DD          +E D  AT   I  ET                   K+ IH  F+A G+QLRPRE RPLL
Sbjct:   37 NKPSCKRAVEPNPLLYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLL---EGKSAAGDAXXXXXXXXXXXXXXXXEVDPEQADNNQVSDDSNTNSRDGTDIEHDHVATQDSIDIET----------------GASKHPIHAVFVAAGVQLRPRETRPLL 191          
BLAST of mRNA_E-fasciculatus_F_contig1339.2539.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 8.970e-12
Identity = 56/166 (33.73%), Postives = 76/166 (45.78%), Query Frame = 1
Query:  169 IYKIAARNLREYNGVPSMTPPKLVKTLAFLKLHPHRLVKQGLAPKVLLARMKAEAANNAKLSKVPLGDGKNNEDLAESAAAGMELMSVEDDKKEWDDGFVSVEPDASATAAPIAAETPIPGNDSEEENNDAAPAV------KKNLIHKAFIAGGIQLRPREVRPLL 648
            ++K AARNLREY+GVPS+TP  L  T+  L+L P RLV QGLAPK+LL                                 G     V+ D  +   GF + E  A+   +   +     G D+  +N     ++       K+ I   F+A G+QLRPRE RPLL
Sbjct:   41 MFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLK--------------------------------GNSTAGVDADSTDGSGGFEAEEEQANNQFSHDLSSNSSDGGDTGNDNIVTQNSIGFEARASKHPIQAVFVAVGVQLRPRETRPLL 174          
BLAST of mRNA_E-fasciculatus_F_contig1339.2539.1 vs. uniprot
Match: A0A6H5KI70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI70_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 2.640e-9
Identity = 37/61 (60.66%), Postives = 43/61 (70.49%), Query Frame = 1
Query:  133 NKPANKLDSEEK--IYKIAARNLREYNGVPSMTPPKLVKTLAFLKLHPHRLVKQGLAPKVL 309
            NKP+ KL  E    +YK AARNLREY+GVPSMT   L KT+  L+L P RLV QGLAPK +
Sbjct:   39 NKPSCKLTGESNPLLYKAAARNLREYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKXI 99          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1339.2539.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5JQ17_9PHAE2.560e-16470.65PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN68_ECTSI4.870e-15875.11PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KB69_9PHAE7.290e-14566.74PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN66_ECTSI1.240e-13183.79PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KAY7_9PHAE7.010e-12983.79PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPU3_9PHAE1.490e-12884.13PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN82_ECTSI5.280e-11284.16PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K3J2_9PHAE1.400e-1236.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCG1_9PHAE8.970e-1233.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI70_9PHAE2.640e-960.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1339contigE-fasciculatus_F_contig1339:2..2898 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-17_002540.1
Exons2
Model size2167
Cds size1053
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1339.2539.1prot_E-fasciculatus_F_contig1339.2539.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1339 951..2003 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927839.1569314-UTR-E-fasciculatus_F_contig1339:1..1391622927839.1569314-UTR-E-fasciculatus_F_contig1339:1..139Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1339 2..139 +
1695995717.381303-UTR-E-fasciculatus_F_contig1339:1..1391695995717.381303-UTR-E-fasciculatus_F_contig1339:1..139Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1339 2..139 +
1622927839.17304-UTR-E-fasciculatus_F_contig1339:869..9501622927839.17304-UTR-E-fasciculatus_F_contig1339:869..950Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1339 870..950 +
1695995717.4013152-UTR-E-fasciculatus_F_contig1339:869..9501695995717.4013152-UTR-E-fasciculatus_F_contig1339:869..950Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1339 870..950 +
1622927839.2019753-UTR-E-fasciculatus_F_contig1339:2003..28981622927839.2019753-UTR-E-fasciculatus_F_contig1339:2003..2898Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1339 2004..2898 +
1695995717.422328-UTR-E-fasciculatus_F_contig1339:2003..28981695995717.422328-UTR-E-fasciculatus_F_contig1339:2003..2898Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1339 2004..2898 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927839.1922483-CDS-E-fasciculatus_F_contig1339:950..20031622927839.1922483-CDS-E-fasciculatus_F_contig1339:950..2003Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1339 951..2003 +
1695995717.411065-CDS-E-fasciculatus_F_contig1339:950..20031695995717.411065-CDS-E-fasciculatus_F_contig1339:950..2003Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1339 951..2003 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1339.2539.1

>prot_E-fasciculatus_F_contig1339.2539.1 ID=prot_E-fasciculatus_F_contig1339.2539.1|Name=mRNA_E-fasciculatus_F_contig1339.2539.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=351bp
MTPPKLVKTLAFLKLHPHRLVKQGLAPKVLLARMKAEAANNAKLSKVPLG
DGKNNEDLAESAAAGMELMSVEDDKKEWDDGFVSVEPDASATAAPIAAET
PIPGNDSEEENNDAAPAVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRP
CRLAKLGLVNGKDLRAMLQAERKITHKRHGRDNNNNNGDTAALHLRRHHH
RDYHRQQHRMGGRLHPFAPPPPPPPAHKKVGDAMFAARGGEGRRGATHRH
GPPPQMKKMMGGGRLHLFALPPPPAHMVDDHEAPGGGCRGRRGGPLFHPA
HQHYAEVFDEDEGGHPGFHPHHGPPARWMAIRRRYGGGDGQQQRRDHYWG
*
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mRNA from alignment at E-fasciculatus_F_contig1339:2..2898+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1339.2539.1 ID=mRNA_E-fasciculatus_F_contig1339.2539.1|Name=mRNA_E-fasciculatus_F_contig1339.2539.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2897bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1339:2..2898+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AAGGACACCGACTTGTCCTTCACGTACAAGGATCCTGATGGGGACGATAT CGTGTTCGACAAGGATTCCGAGCTGAAGCTTGCCCTGCGCCTGTGCCCCG GCTCGCTCGAGATCTCGGCTGCCGGCAAGGAAAACAAGGTAAGCGCGTCA ATAATAACCCACAGCGGTGTACAGAGGGCACACGTGTAGGGCACATGCTC TGACGACGTCGCCCATGGAAAACAAGCACAAGTTCTGCGATACTCTCCTC CTGTTATCGCACTGCCCCCATTCATTGCTACTTCGTAGTGTTATTTTTCT TCAGCCAGACGTCGAAGTTGTTGCGGGCCCCGAAAAATTCACGTTACCTC TCCGTCCTCTCCAAATGGAGCTACGAAACGTTGTCAAGCCGCCTTCGCCT TATCATAATCATTTTGCCCCATCTTCCCTCACTTTCCTACTGAGTAGGTT GTGGGCCATCCACTCACAGCAATAATCCCAAGAACTTGATGAATCGATGA AGTCCCACCCAACGTCGCTTTTTTACCTGTACTTCCGAAGTTATTTGTCC GAGCCATGTCATGACGATGTTATGTAGGAAGAACACCAGCGAGACATATC GCAACGACCTCTTTGACGTCTGATGGGTCACAACTTCTTCATTTTGGCCG CCTGAAGAATACCGATCGTTTCTCGTAGAGCATTTTCTGCTCTTGGATCG CACCTCTACGAGTTAGTGATTTCGATTTGATTGTCGGCGGTTGCTTTTCG ATGTACGCTCTACCTCCGACGTCCAGAAGCTGCTGGATCCTGCATCCCAA CAAGCGACGTTCTGGGAAATCAACCCCACCGCCGTTCCACCCTCTCCTCC ATTCCCTCTTCCCTTCAGCCTGCTAACAAGCTCGACTCCGAAGAAAAGAT ATACAAGATCGCCGCCCGTAACCTGCGCGAGTACAACGGCGTGCCCTCGA TGACACCGCCTAAGCTCGTCAAGACCCTGGCGTTCCTCAAGCTTCACCCG CACCGCCTCGTGAAGCAGGGCCTTGCTCCCAAGGTTCTGCTGGCTCGCAT GAAGGCCGAAGCCGCCAACAACGCCAAGTTATCGAAGGTTCCTCTCGGTG ACGGCAAGAACAACGAGGATCTCGCCGAATCGGCCGCCGCCGGCATGGAA CTGATGAGCGTGGAGGACGACAAGAAGGAGTGGGACGACGGCTTCGTGTC CGTCGAGCCGGACGCGTCTGCTACCGCGGCACCCATCGCCGCCGAGACTC CCATCCCCGGCAACGACAGCGAAGAGGAGAACAATGACGCTGCGCCTGCG GTCAAGAAGAACCTCATCCACAAGGCCTTCATCGCCGGCGGCATCCAGCT CCGCCCCCGCGAGGTCCGGCCCCTGCTCGTCGCCCTGGACGTCCGCCCCT GCCGGCTGGCCAAGCTCGGCCTCGTCAACGGCAAGGATCTCCGCGCCATG CTCCAAGCCGAGAGGAAGATCACCCACAAGCGCCACGGCCGTGACAACAA CAACAACAACGGTGACACCGCCGCCCTCCACCTCCGCCGCCACCACCACC GCGACTACCACCGCCAGCAGCACCGCATGGGCGGCCGCCTCCACCCCTTC GCCCCGCCTCCCCCTCCCCCCCCGGCTCACAAGAAGGTCGGCGACGCCAT GTTTGCCGCGCGCGGCGGCGAGGGGCGCCGCGGTGCCACCCACCGCCACG GCCCGCCCCCTCAGATGAAAAAGATGATGGGCGGCGGCCGCCTCCACCTC TTCGCCCTCCCCCCTCCCCCGGCTCACATGGTGGACGACCACGAGGCGCC CGGTGGCGGATGCCGTGGTCGCCGCGGTGGCCCTCTCTTCCACCCCGCCC ACCAGCACTACGCGGAGGTGTTCGACGAGGATGAGGGAGGCCACCCCGGT TTCCACCCCCACCACGGCCCCCCTGCTCGCTGGATGGCGATCCGCAGGAG GTACGGCGGCGGTGATGGCCAGCAACAGCGCAGGGACCACTACTGGGGAT GAGCATCTTCGTCGCCATGAAACCGACGGAGGAGCCTAGCTGTCTGCTAC CGTTCTGCTCTTTGTGCCGCGTTTCGTGGCACAAGATTGAAGAACGGCAT GGGAAGTAGTTGAGTTGGTATAGCCTTGTCTTTCGGTACTATTTGCAATT GGGCAGAAGCCTCCCTCGGGAAAACTGATACGAGGGGTGGAGAACGGAAG GTTTGAGTAGACGAGAACCGTTTCACCGTTTGGCTTCTGCACTCATGCAG CACTACGATAGACGTAGATGCCCGAAACATCTTTCAAAGTCAAACCGTCT CGATTTGATTTGAGTTTCGTCTTGCGTGGTTTCTTTTTCTTCTGCGCTCT CGTTGTTGAGAGGGGCGTGAGTTTGCGTGTTGCATTACAGTAGTCGCTGT GCGATGCAGAGTGCATCCACACCTGGTAGCTGATTGCGAGTGAGTGAAAC GACGAGTTCGTTGCGCCGTTTATATGCGGCATCAGAGTGATTCAGCAGGT GGGTTGATCTCGTTCTCGGACGGGGAGAGGAGAAAAATCTCGCGAAGTAT TACCTGCGGAGTGAATTTGGGTTAAAAAGGACAGCTTACACCCACTACAG TACGGGCATTGTATTAGGAAATTCGGGGAGGCCACGTCGCGCAGCGGTGT TTCGGTTGCAAAGTTCGACGTTTAGGTGTCAACCCATGAACGATTGCCCT CGAGTTCATGCATAATTTGGGGTTAACGAGGCGGTTGTGATAGTCAAACG CCGGCCAGTTGATTTTTCGGACTGGAACGTGTTCAGCTGGGTGGATGGAA TGGGGAGGAAAAGTAAATTGATGTGGGCATGGGAGAGAGACGGGAGAGGA GGGAGAGCGAGTTCCTCCCACTGTGTGGCGTAGTGAGAAGAAATAAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1339:2..2898+

>mRNA_E-fasciculatus_F_contig1339.2539.1 ID=mRNA_E-fasciculatus_F_contig1339.2539.1|Name=mRNA_E-fasciculatus_F_contig1339.2539.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2106bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1339:2..2898+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGACACCGCCTAAGCTCGTCAAGACCCTGGCGTTCCTCAAGCTTCACCC
GCACCGCCTCGTGAAGCAGGGCCTTGCTCCCAAGGTTCTGCTGGCTCGCA
TGAAGGCCGAAGCCGCCAACAACGCCAAGTTATCGAAGGTTCCTCTCGGT
GACGGCAAGAACAACGAGGATCTCGCCGAATCGGCCGCCGCCGGCATGGA
ACTGATGAGCGTGGAGGACGACAAGAAGGAGTGGGACGACGGCTTCGTGT
CCGTCGAGCCGGACGCGTCTGCTACCGCGGCACCCATCGCCGCCGAGACT
CCCATCCCCGGCAACGACAGCGAAGAGGAGAACAATGACGCTGCGCCTGC
GGTCAAGAAGAACCTCATCCACAAGGCCTTCATCGCCGGCGGCATCCAGC
TCCGCCCCCGCGAGGTCCGGCCCCTGCTCGTCGCCCTGGACGTCCGCCCC
TGCCGGCTGGCCAAGCTCGGCCTCGTCAACGGCAAGGATCTCCGCGCCAT
GCTCCAAGCCGAGAGGAAGATCACCCACAAGCGCCACGGCCGTGACAACA
ACAACAACAACGGTGACACCGCCGCCCTCCACCTCCGCCGCCACCACCAC
CGCGACTACCACCGCCAGCAGCACCGCATGGGCGGCCGCCTCCACCCCTT
CGCCCCGCCTCCCCCTCCCCCCCCGGCTCACAAGAAGGTCGGCGACGCCA
TGTTTGCCGCGCGCGGCGGCGAGGGGCGCCGCGGTGCCACCCACCGCCAC
GGCCCGCCCCCTCAGATGAAAAAGATGATGGGCGGCGGCCGCCTCCACCT
CTTCGCCCTCCCCCCTCCCCCGGCTCACATGGTGGACGACCACGAGGCGC
CCGGTGGCGGATGCCGTGGTCGCCGCGGTGGCCCTCTCTTCCACCCCGCC
CACCAGCACTACGCGGAGGTGTTCGACGAGGATGAGGGAGGCCACCCCGG
TTTCCACCCCCACCACGGCCCCCCTGCTCGCTGGATGGCGATCCGCAGGA
GGTACGGCGGCGGTGATGGCCAGCAACAGCGCAGGGACCACTACTGGGGA
TGAATGACACCGCCTAAGCTCGTCAAGACCCTGGCGTTCCTCAAGCTTCA
CCCGCACCGCCTCGTGAAGCAGGGCCTTGCTCCCAAGGTTCTGCTGGCTC
GCATGAAGGCCGAAGCCGCCAACAACGCCAAGTTATCGAAGGTTCCTCTC
GGTGACGGCAAGAACAACGAGGATCTCGCCGAATCGGCCGCCGCCGGCAT
GGAACTGATGAGCGTGGAGGACGACAAGAAGGAGTGGGACGACGGCTTCG
TGTCCGTCGAGCCGGACGCGTCTGCTACCGCGGCACCCATCGCCGCCGAG
ACTCCCATCCCCGGCAACGACAGCGAAGAGGAGAACAATGACGCTGCGCC
TGCGGTCAAGAAGAACCTCATCCACAAGGCCTTCATCGCCGGCGGCATCC
AGCTCCGCCCCCGCGAGGTCCGGCCCCTGCTCGTCGCCCTGGACGTCCGC
CCCTGCCGGCTGGCCAAGCTCGGCCTCGTCAACGGCAAGGATCTCCGCGC
CATGCTCCAAGCCGAGAGGAAGATCACCCACAAGCGCCACGGCCGTGACA
ACAACAACAACAACGGTGACACCGCCGCCCTCCACCTCCGCCGCCACCAC
CACCGCGACTACCACCGCCAGCAGCACCGCATGGGCGGCCGCCTCCACCC
CTTCGCCCCGCCTCCCCCTCCCCCCCCGGCTCACAAGAAGGTCGGCGACG
CCATGTTTGCCGCGCGCGGCGGCGAGGGGCGCCGCGGTGCCACCCACCGC
CACGGCCCGCCCCCTCAGATGAAAAAGATGATGGGCGGCGGCCGCCTCCA
CCTCTTCGCCCTCCCCCCTCCCCCGGCTCACATGGTGGACGACCACGAGG
CGCCCGGTGGCGGATGCCGTGGTCGCCGCGGTGGCCCTCTCTTCCACCCC
GCCCACCAGCACTACGCGGAGGTGTTCGACGAGGATGAGGGAGGCCACCC
CGGTTTCCACCCCCACCACGGCCCCCCTGCTCGCTGGATGGCGATCCGCA
GGAGGTACGGCGGCGGTGATGGCCAGCAACAGCGCAGGGACCACTACTGG
GGATGA
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