mRNA_E-fasciculatus_F_contig13384.2533.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13384.2533.1 vs. uniprot
Match: A0A6H5L694_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L694_9PHAE) HSP 1 Score: 136 bits (343), Expect = 6.150e-36 Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 1
Query: 1 PYNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVAAVREPGALAVLEGVTFGASR 210
PYNAVLT RWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVA+VREPGALAVLEGVTFGASR
Sbjct: 594 PYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVASVREPGALAVLEGVTFGASR 663
BLAST of mRNA_E-fasciculatus_F_contig13384.2533.1 vs. uniprot
Match: D8LQY6_ECTSI (Ap4A phosphorylase II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY6_ECTSI) HSP 1 Score: 134 bits (338), Expect = 9.580e-36 Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 1
Query: 1 PYNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVAAVREPGALAVLEGVTFGAS 207
PYNAVLT RWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVA+VREPGALAVLEGVTFGAS
Sbjct: 436 PYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVASVREPGALAVLEGVTFGAS 504
BLAST of mRNA_E-fasciculatus_F_contig13384.2533.1 vs. uniprot
Match: A0A1F4CNC5_9PROT (Phosphorylase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4CNC5_9PROT) HSP 1 Score: 64.3 bits (155), Expect = 1.720e-10 Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 1 PYNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVAAVREPGALAVLEGVTFG 201
PYN +LTRRWL+ VPR+R + I VN +GF G+L VRD+A +AAV+ G +AVL V G
Sbjct: 241 PYNLLLTRRWLLAVPRAREHFDSISVNALGFAGSLFVRDEAQ------LAAVKRAGPMAVLRAVAEG 301
BLAST of mRNA_E-fasciculatus_F_contig13384.2533.1 vs. uniprot
Match: A0A4V5LXM1_9GAMM (Phosphorylase n=2 Tax=Sinimarinibacterium sp. CAU 1509 TaxID=2562283 RepID=A0A4V5LXM1_9GAMM) HSP 1 Score: 62.0 bits (149), Expect = 1.310e-9 Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 4 YNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVAAVREPGALAVLEGVT 195
YN ++TRRW+M+VPR++ W G+ VN + F GALL RD A A +RE G A+L VT
Sbjct: 261 YNWLMTRRWMMVVPRTQERWDGMSVNALAFAGALLARDAAEATR------IREAGPAAILSAVT 318
BLAST of mRNA_E-fasciculatus_F_contig13384.2533.1 vs. uniprot
Match: A0A6I2GTI3_9DELT (ATP adenylyltransferase n=1 Tax=Aggregicoccus sp. 17bor-14 TaxID=2583808 RepID=A0A6I2GTI3_9DELT) HSP 1 Score: 61.6 bits (148), Expect = 1.560e-9 Identity = 32/64 (50.00%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 1 PYNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVAAVREPGALAVLEGV 192
PYN ++TRRW++LVPR W GI++N MGF G+LLVR +A VRE G AVL V
Sbjct: 230 PYNLLVTRRWMILVPRRAAAWEGIELNAMGFAGSLLVRTHQQ------LARVREAGPAAVLRAV 287
BLAST of mRNA_E-fasciculatus_F_contig13384.2533.1 vs. uniprot
Match: A0A7C5TPW7_9GAMM (ATP_transf domain-containing protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5TPW7_9GAMM) HSP 1 Score: 60.5 bits (145), Expect = 2.060e-9 Identity = 30/64 (46.88%), Postives = 39/64 (60.94%), Query Frame = 1
Query: 1 PYNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVAAVREPGALAVLEGV 192
PYN ++TRRW+M VPR+R W GI VN +GF G+LLV D +A +R G + VL V
Sbjct: 149 PYNLLVTRRWMMAVPRTRERWEGISVNALGFAGSLLVPDDE------ALARLRAAGPMRVLAAV 206
BLAST of mRNA_E-fasciculatus_F_contig13384.2533.1 vs. uniprot
Match: A0A3A8NBY7_9DELT (ATP adenylyltransferase (Fragment) n=1 Tax=Corallococcus llansteffanensis TaxID=2316731 RepID=A0A3A8NBY7_9DELT) HSP 1 Score: 56.6 bits (135), Expect = 5.060e-9 Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 1
Query: 1 PYNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVR 114
PYN + TR W+MLVPRSR E G++VN +GF G+LLVR
Sbjct: 13 PYNLLATREWMMLVPRSRAEHLGVNVNALGFAGSLLVR 50
BLAST of mRNA_E-fasciculatus_F_contig13384.2533.1 vs. uniprot
Match: A0A5A8C3D5_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C3D5_CAFRO) HSP 1 Score: 60.1 bits (144), Expect = 6.570e-9 Identity = 32/66 (48.48%), Postives = 39/66 (59.09%), Query Frame = 1
Query: 4 YNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVAAVREPGALAVLEGVTFG 201
YN +LTRRW+M+VPR+R WG + VN +GF G LL R A GE A+ E G L L V G
Sbjct: 278 YNLLLTRRWMMVVPRTRERWGPVSVNAVGFAGLLLARGDA--GE-----ALSEAGPLTALRAVAAG 336
BLAST of mRNA_E-fasciculatus_F_contig13384.2533.1 vs. uniprot
Match: A0A6V1NM67_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NM67_HETAK) HSP 1 Score: 58.2 bits (139), Expect = 7.590e-9 Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 4 YNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVAAVREPGALAVLEGV 192
YN ++T W+M++PR++RE+ G+DVN +GF G LL R +A A AVR+ G L +L GV
Sbjct: 100 YNLLMTPEWMMVIPRTQREFEGVDVNALGFAGLLLTRGEAPA------QAVRQWGPLHILNGV 156
BLAST of mRNA_E-fasciculatus_F_contig13384.2533.1 vs. uniprot
Match: A0A3N1YAM4_9GAMM (ATP adenylyltransferase n=1 Tax=Inmirania thermothiophila TaxID=1750597 RepID=A0A3N1YAM4_9GAMM) HSP 1 Score: 59.7 bits (143), Expect = 7.900e-9 Identity = 23/41 (56.10%), Postives = 31/41 (75.61%), Query Frame = 1
Query: 1 PYNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKA 123
PYN +LTR W++LVPRSR + G+ VNG+GF G+L D+A
Sbjct: 232 PYNLLLTREWMLLVPRSRERYAGVSVNGLGFAGSLFAPDRA 272 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13384.2533.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13384.2533.1 >prot_E-fasciculatus_F_contig13384.2533.1 ID=prot_E-fasciculatus_F_contig13384.2533.1|Name=mRNA_E-fasciculatus_F_contig13384.2533.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=71bp PYNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVAback to top mRNA from alignment at E-fasciculatus_F_contig13384:78..290+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13384.2533.1 ID=mRNA_E-fasciculatus_F_contig13384.2533.1|Name=mRNA_E-fasciculatus_F_contig13384.2533.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=213bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13384:78..290+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13384:78..290+ >mRNA_E-fasciculatus_F_contig13384.2533.1 ID=mRNA_E-fasciculatus_F_contig13384.2533.1|Name=mRNA_E-fasciculatus_F_contig13384.2533.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=426bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13384:78..290+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |