prot_E-fasciculatus_F_contig1332.2497.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1332.2497.1
Unique Nameprot_E-fasciculatus_F_contig1332.2497.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length94
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1332.2497.1 vs. uniprot
Match: A0A6H5KKG1_9PHAE (VPS13_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG1_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 9.980e-34
Identity = 73/79 (92.41%), Postives = 74/79 (93.67%), Query Frame = 0 
Query:   16 ALASVQGRPPPRASRLSPRASDAGSGSALSSPRTLPPLPVTSSSETSLHFALRSVEVALGLAGGTRQAGENGGDRSRDQ 94
            ALASVQGRPPPRASRLSPRASDAGSGSALSSPRTLPP PV SSSETSLHFALRSVEVALGLAGG  +AGEN GDRSRDQ
Sbjct:  993 ALASVQGRPPPRASRLSPRASDAGSGSALSSPRTLPPRPVNSSSETSLHFALRSVEVALGLAGGAHEAGENVGDRSRDQ 1071
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1332.2497.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKG1_9PHAE9.980e-3492.41VPS13_C domain-containing protein n=2 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1332contigE-fasciculatus_F_contig1332:16295..16576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1332.2497.1mRNA_E-fasciculatus_F_contig1332.2497.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1332 16295..16578 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1332.2497.1 ID=prot_E-fasciculatus_F_contig1332.2497.1|Name=mRNA_E-fasciculatus_F_contig1332.2497.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=94bp
EDEAAAPPLTTAPVAALASVQGRPPPRASRLSPRASDAGSGSALSSPRTL
PPLPVTSSSETSLHFALRSVEVALGLAGGTRQAGENGGDRSRDQ
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